RNA–Protein interactions for RNA: ENST00000503350.6

CSNK1A1-203, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 2

Gene CSNK1A1, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-203ENST00000503350 ZNF530Q6P9A1 599 aaPredicted RBP12.56□□□□□ -0.4
CSNK1A1-203ENST00000503350 NBPF15Q8N660 670 aa12.56□□□□□ -0.4
CSNK1A1-203ENST00000503350 ELL2O00472 640 aaPredicted RBP12.55□□□□□ -0.4
CSNK1A1-203ENST00000503350 TSPYL6Q8N831 410 aa12.55□□□□□ -0.4
CSNK1A1-203ENST00000503350 SSH1Q8WYL5 1049 aa12.55□□□□□ -0.4
CSNK1A1-203ENST00000503350 N4BP2Q86UW6 1770 aaPredicted RBP12.55□□□□□ -0.4
CSNK1A1-203ENST00000503350 COL5A2P05997 1499 aaPredicted RBP12.54□□□□□ -0.4
CSNK1A1-203ENST00000503350 MEGF6O75095 1541 aa12.54□□□□□ -0.4
CSNK1A1-203ENST00000503350 RAD21O60216 631 aa12.54□□□□□ -0.4
CSNK1A1-203ENST00000503350 TWISTNBQ3B726 338 aaPredicted RBP12.54□□□□□ -0.4
CSNK1A1-203ENST00000503350 OXLD1Q5BKU9 147 aa12.54□□□□□ -0.4
CSNK1A1-203ENST00000503350 PANK1Q8TE04 598 aa12.54□□□□□ -0.4
CSNK1A1-203ENST00000503350 CNTNAP3BQ96NU0 1288 aa12.54□□□□□ -0.4
CSNK1A1-203ENST00000503350 CNTNAP3Q9BZ76 1288 aa12.54□□□□□ -0.4
CSNK1A1-203ENST00000503350 TSPYL4Q9UJ04 414 aa12.54□□□□□ -0.4
CSNK1A1-203ENST00000503350 HRH3Q9Y5N1 445 aa12.54□□□□□ -0.4
CSNK1A1-203ENST00000503350 NRAPQ86VF7 1730 aa12.54□□□□□ -0.4
CSNK1A1-203ENST00000503350 CHL1O00533 1208 aa12.53□□□□□ -0.4
CSNK1A1-203ENST00000503350 POU4F2Q12837 409 aa12.53□□□□□ -0.4
CSNK1A1-203ENST00000503350 PDE3AQ14432 1141 aa12.53□□□□□ -0.4
CSNK1A1-203ENST00000503350 TSGA10IPQ3SY00 556 aa12.53□□□□□ -0.4
CSNK1A1-203ENST00000503350 ALDH1L2Q3SY69 923 aa12.53□□□□□ -0.4
CSNK1A1-203ENST00000503350 AMOTQ4VCS5 1084 aa12.53□□□□□ -0.4
CSNK1A1-203ENST00000503350 C1orf141Q5JVX7 400 aa12.53□□□□□ -0.4
CSNK1A1-203ENST00000503350 ZKSCAN2Q63HK3 967 aa12.53□□□□□ -0.4
CSNK1A1-203ENST00000503350 TAS1R3Q7RTX0 852 aa12.53□□□□□ -0.4
CSNK1A1-203ENST00000503350 TRIM22Q8IYM9 498 aa12.53□□□□□ -0.4
CSNK1A1-203ENST00000503350 C8orf58Q8NAV2 365 aa12.53□□□□□ -0.4
CSNK1A1-203ENST00000503350 PLPP7Q8NBV4 271 aa12.53□□□□□ -0.4
CSNK1A1-203ENST00000503350 RAPGEF4Q8WZA2 1011 aa12.53□□□□□ -0.4
CSNK1A1-203ENST00000503350 XAGE2Q96GT9 111 aa12.53□□□□□ -0.4
CSNK1A1-203ENST00000503350 MIS18AQ9NYP9 233 aa12.53□□□□□ -0.4
CSNK1A1-203ENST00000503350 TNNQ9UQP3 1299 aa12.53□□□□□ -0.4
CSNK1A1-203ENST00000503350 ITGB4P16144 1822 aa12.53□□□□□ -0.4
CSNK1A1-203ENST00000503350 C5P01031 1676 aa12.52□□□□□ -0.4
CSNK1A1-203ENST00000503350 VAMP4O75379 141 aa12.52□□□□□ -0.41
CSNK1A1-203ENST00000503350 TATP17735 454 aaPredicted RBP12.52□□□□□ -0.41
CSNK1A1-203ENST00000503350 TMEM132AQ24JP5 1023 aa12.52□□□□□ -0.41
CSNK1A1-203ENST00000503350 AKAP4Q5JQC9 854 aa12.52□□□□□ -0.41
CSNK1A1-203ENST00000503350 FTSJ3Q8IY81 847 aaKnown RBP12.52□□□□□ -0.41
CSNK1A1-203ENST00000503350 IL17REQ8NFR9 667 aa12.52□□□□□ -0.41
CSNK1A1-203ENST00000503350 ZNF428Q96B54 188 aa12.52□□□□□ -0.41
CSNK1A1-203ENST00000503350 CUEDC1Q9NWM3 386 aaPredicted RBP12.52□□□□□ -0.41
CSNK1A1-203ENST00000503350 KIF16BQ96L93 1317 aa12.52□□□□□ -0.41
CSNK1A1-203ENST00000503350 H7C1W4 665 aa12.51□□□□□ -0.41
CSNK1A1-203ENST00000503350 TCERG1O14776 1098 aaKnown RBP12.51□□□□□ -0.41
CSNK1A1-203ENST00000503350 PIP4K2BP78356 416 aa12.51□□□□□ -0.41
CSNK1A1-203ENST00000503350 CENPCQ03188 943 aa12.51□□□□□ -0.41
CSNK1A1-203ENST00000503350 KRT24Q2M2I5 525 aa12.51□□□□□ -0.41
CSNK1A1-203ENST00000503350 RNFT1Q5M7Z0 435 aa12.51□□□□□ -0.41
CSNK1A1-203ENST00000503350 CLUAP1Q96AJ1 413 aa12.51□□□□□ -0.41
CSNK1A1-203ENST00000503350 ZNF837Q96EG3 531 aaPredicted RBP12.51□□□□□ -0.41
CSNK1A1-203ENST00000503350 NOB1Q9ULX3 412 aaKnown RBP12.51□□□□□ -0.41
CSNK1A1-203ENST00000503350 OVOS2A0A0G2JMS6 1433 aa12.51□□□□□ -0.41
CSNK1A1-203ENST00000503350 NWD2Q9ULI1 1742 aa12.51□□□□□ -0.41
CSNK1A1-203ENST00000503350 RLBP1P12271 317 aa12.5□□□□□ -0.41
CSNK1A1-203ENST00000503350 TOM1L2Q6ZVM7 507 aa12.5□□□□□ -0.41
CSNK1A1-203ENST00000503350 POM121Q96HA1 1249 aa12.5□□□□□ -0.41
CSNK1A1-203ENST00000503350 ZSCAN10Q96SZ4 725 aaPredicted RBP12.5□□□□□ -0.41
CSNK1A1-203ENST00000503350 FHDC1Q9C0D6 1143 aaPredicted RBP12.5□□□□□ -0.41
CSNK1A1-203ENST00000503350 TIMMDC1Q9NPL8 285 aa12.5□□□□□ -0.41
CSNK1A1-203ENST00000503350 STRN4Q9NRL3 753 aa12.5□□□□□ -0.41
CSNK1A1-203ENST00000503350 WDR17Q8IZU2 1322 aa12.5□□□□□ -0.41
CSNK1A1-203ENST00000503350 LAMB4A4D0S4 1761 aa12.49□□□□□ -0.41
CSNK1A1-203ENST00000503350 CEMIPQ8WUJ3 1361 aa12.49□□□□□ -0.41
CSNK1A1-203ENST00000503350 IPO8O15397 1037 aaKnown RBP12.49□□□□□ -0.41
CSNK1A1-203ENST00000503350 TOM1O60784 492 aa12.49□□□□□ -0.41
CSNK1A1-203ENST00000503350 GTF2E1P29083 439 aaPredicted RBP12.49□□□□□ -0.41
CSNK1A1-203ENST00000503350 EVA1CP58658 441 aa12.49□□□□□ -0.41
CSNK1A1-203ENST00000503350 TAF7Q15545 349 aaPredicted RBP12.49□□□□□ -0.41
CSNK1A1-203ENST00000503350 ATF7IPQ6VMQ6 1270 aa12.49□□□□□ -0.41
CSNK1A1-203ENST00000503350 MPRIPQ6WCQ1 1025 aa12.49□□□□□ -0.41
CSNK1A1-203ENST00000503350 DZIP1LQ8IYY4 767 aaKnown RBP12.49□□□□□ -0.41
CSNK1A1-203ENST00000503350 LGR6Q9HBX8 967 aa12.49□□□□□ -0.41
CSNK1A1-203ENST00000503350 TOGARAM1Q9Y4F4 1720 aa12.48□□□□□ -0.41
CSNK1A1-203ENST00000503350 RNMTO43148 476 aaKnown RBP12.48□□□□□ -0.41
CSNK1A1-203ENST00000503350 TRIM27P14373 513 aa12.48□□□□□ -0.41
CSNK1A1-203ENST00000503350 GNASQ5JWF2 1037 aa12.48□□□□□ -0.41
CSNK1A1-203ENST00000503350 FOXR1Q6PIV2 292 aa12.48□□□□□ -0.41
CSNK1A1-203ENST00000503350 RIPOR1Q6ZS17 1223 aa12.48□□□□□ -0.41
CSNK1A1-203ENST00000503350 NFATC2IPQ8NCF5 419 aa12.48□□□□□ -0.41
CSNK1A1-203ENST00000503350 ALG2Q9H553 416 aa12.48□□□□□ -0.41
CSNK1A1-203ENST00000503350 ETNK1Q9HBU6 452 aa12.48□□□□□ -0.41
CSNK1A1-203ENST00000503350 SPG7Q9UQ90 795 aa12.48□□□□□ -0.41
CSNK1A1-203ENST00000503350 SLURP2P0DP57 97 aa12.47□□□□□ -0.41
CSNK1A1-203ENST00000503350 TEFQ10587 303 aa12.47□□□□□ -0.41
CSNK1A1-203ENST00000503350 UBR2Q8IWV8 1755 aa12.46□□□□□ -0.41
CSNK1A1-203ENST00000503350 UBAP1LF5GYI3 381 aa12.46□□□□□ -0.41
CSNK1A1-203ENST00000503350 MVPQ14764 893 aaKnown RBP12.46□□□□□ -0.41
CSNK1A1-203ENST00000503350 ITPRIPQ8IWB1 547 aa12.46□□□□□ -0.41
CSNK1A1-203ENST00000503350 GAS2L1Q99501 681 aaPredicted RBP12.46□□□□□ -0.41
CSNK1A1-203ENST00000503350 BABAM1Q9NWV8 329 aa12.46□□□□□ -0.41
CSNK1A1-203ENST00000503350 KDM6AO15550 1401 aaPredicted RBP12.45□□□□□ -0.42
CSNK1A1-203ENST00000503350 PLEKHG2Q9H7P9 1386 aa12.45□□□□□ -0.42
CSNK1A1-203ENST00000503350 PAPPAQ13219 1627 aa12.45□□□□□ -0.42
CSNK1A1-203ENST00000503350 A0A1B0GTH6 734 aa12.45□□□□□ -0.42
CSNK1A1-203ENST00000503350 F11P03951 625 aa12.45□□□□□ -0.42
CSNK1A1-203ENST00000503350 SCNN1DP51172 638 aa12.45□□□□□ -0.42
CSNK1A1-203ENST00000503350 TLR1Q15399 786 aa12.45□□□□□ -0.42
CSNK1A1-203ENST00000503350 LARP1Q6PKG0 1096 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms