RNA–Protein interactions for RNA: ENST00000502865.5

SFXN1-204, Transcript of sideroflexin 1, humanhuman

TSL 5

Gene SFXN1, Length 641 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-204ENST00000502865 USP26Q9BXU7 913 aa11.79□□□□□ -0.52
SFXN1-204ENST00000502865 GNL3LQ9NVN8 582 aaKnown RBP11.79□□□□□ -0.52
SFXN1-204ENST00000502865 RFX7Q2KHR2 1363 aa11.79□□□□□ -0.52
SFXN1-204ENST00000502865 MED23Q9ULK4 1368 aa11.79□□□□□ -0.52
SFXN1-204ENST00000502865 CHD4Q14839 1912 aa11.78□□□□□ -0.52
SFXN1-204ENST00000502865 HIP1O00291 1037 aa11.78□□□□□ -0.52
SFXN1-204ENST00000502865 ZBTB22O15209 634 aa11.78□□□□□ -0.52
SFXN1-204ENST00000502865 C21orf2O43822 256 aa11.78□□□□□ -0.52
SFXN1-204ENST00000502865 YY1P25490 414 aa11.78□□□□□ -0.52
SFXN1-204ENST00000502865 TBC1D32Q96NH3 1257 aa11.78□□□□□ -0.52
SFXN1-204ENST00000502865 C22orf23Q9BZE7 217 aa11.78□□□□□ -0.52
SFXN1-204ENST00000502865 PPP1R1BQ9UD71 204 aaPredicted RBP11.78□□□□□ -0.52
SFXN1-204ENST00000502865 WWC3Q9ULE0 1092 aa11.78□□□□□ -0.52
SFXN1-204ENST00000502865 DENND2AQ9ULE3 1009 aa11.78□□□□□ -0.52
SFXN1-204ENST00000502865 JAG2Q9Y219 1238 aa11.78□□□□□ -0.52
SFXN1-204ENST00000502865 CD2APQ9Y5K6 639 aa11.78□□□□□ -0.52
SFXN1-204ENST00000502865 BRCA1P38398 1863 aaKnown RBP11.78□□□□□ -0.52
SFXN1-204ENST00000502865 SEMA3EO15041 775 aa11.77□□□□□ -0.53
SFXN1-204ENST00000502865 CHAF1AQ13111 956 aaPredicted RBP11.77□□□□□ -0.53
SFXN1-204ENST00000502865 TTF1Q15361 905 aaPredicted RBP11.77□□□□□ -0.53
SFXN1-204ENST00000502865 ZMYM1Q5SVZ6 1142 aa11.77□□□□□ -0.53
SFXN1-204ENST00000502865 CCDC129Q6ZRS4 1044 aa11.77□□□□□ -0.53
SFXN1-204ENST00000502865 ZNF804AQ7Z570 1209 aa11.77□□□□□ -0.53
SFXN1-204ENST00000502865 ZNF589Q86UQ0 364 aaPredicted RBP11.77□□□□□ -0.53
SFXN1-204ENST00000502865 KLHL34Q8N239 644 aa11.77□□□□□ -0.53
SFXN1-204ENST00000502865 RUFY2Q8WXA3 655 aa11.77□□□□□ -0.53
SFXN1-204ENST00000502865 RTFDC1Q9BY42 306 aaPredicted RBP11.77□□□□□ -0.53
SFXN1-204ENST00000502865 LSG1Q9H089 658 aaKnown RBP11.77□□□□□ -0.53
SFXN1-204ENST00000502865 CD209Q9NNX6 404 aa11.77□□□□□ -0.53
SFXN1-204ENST00000502865 M0R2C6 588 aa11.76□□□□□ -0.53
SFXN1-204ENST00000502865 IDH1O75874 414 aaKnown RBP11.76□□□□□ -0.53
SFXN1-204ENST00000502865 IL1R1P14778 569 aa11.76□□□□□ -0.53
SFXN1-204ENST00000502865 ADD2P35612 726 aa11.76□□□□□ -0.53
SFXN1-204ENST00000502865 PTH1RQ03431 593 aa11.76□□□□□ -0.53
SFXN1-204ENST00000502865 DOK7Q18PE1 504 aa11.76□□□□□ -0.53
SFXN1-204ENST00000502865 WASHC4Q2M389 1173 aa11.76□□□□□ -0.53
SFXN1-204ENST00000502865 TICAM2Q86XR7 235 aa11.76□□□□□ -0.53
SFXN1-204ENST00000502865 NLGN2Q8NFZ4 835 aa11.76□□□□□ -0.53
SFXN1-204ENST00000502865 OSBP2Q969R2 916 aa11.76□□□□□ -0.53
SFXN1-204ENST00000502865 TMX4Q9H1E5 349 aaPredicted RBP11.76□□□□□ -0.53
SFXN1-204ENST00000502865 UPF2Q9HAU5 1272 aaKnown RBP11.76□□□□□ -0.53
SFXN1-204ENST00000502865 SPON1Q9HCB6 807 aa11.76□□□□□ -0.53
SFXN1-204ENST00000502865 ANO2Q9NQ90 1003 aa11.76□□□□□ -0.53
SFXN1-204ENST00000502865 PIM2Q9P1W9 311 aa11.76□□□□□ -0.53
SFXN1-204ENST00000502865 TCRBV5S4A2TA0A5A2 114 aa11.75□□□□□ -0.53
SFXN1-204ENST00000502865 FRAT2O75474 233 aaPredicted RBP11.75□□□□□ -0.53
SFXN1-204ENST00000502865 REC8O95072 547 aa11.75□□□□□ -0.53
SFXN1-204ENST00000502865 PDE6AP16499 860 aa11.75□□□□□ -0.53
SFXN1-204ENST00000502865 RBM25P49756 843 aaKnown RBP11.75□□□□□ -0.53
SFXN1-204ENST00000502865 GRIK5Q16478 980 aa11.75□□□□□ -0.53
SFXN1-204ENST00000502865 MCMDC2Q4G0Z9 681 aa11.75□□□□□ -0.53
SFXN1-204ENST00000502865 SLC9C2Q5TAH2 1124 aa11.75□□□□□ -0.53
SFXN1-204ENST00000502865 CC2D2BQ6DHV5 1058 aa11.75□□□□□ -0.53
SFXN1-204ENST00000502865 ZC3H12CQ9C0D7 883 aaKnown RBP11.75□□□□□ -0.53
SFXN1-204ENST00000502865 PUS7LQ9H0K6 701 aaKnown RBP11.75□□□□□ -0.53
SFXN1-204ENST00000502865 HELLSQ9NRZ9 838 aa11.75□□□□□ -0.53
SFXN1-204ENST00000502865 ABCF2Q9UG63 623 aa11.75□□□□□ -0.53
SFXN1-204ENST00000502865 MAST3O60307 1309 aa11.75□□□□□ -0.53
SFXN1-204ENST00000502865 PDS5AQ29RF7 1337 aaKnown RBP11.75□□□□□ -0.53
SFXN1-204ENST00000502865 RAD50Q92878 1312 aa11.75□□□□□ -0.53
SFXN1-204ENST00000502865 ZNF532Q9HCE3 1301 aa11.75□□□□□ -0.53
SFXN1-204ENST00000502865 EIF5BO60841 1220 aaKnown RBP11.74□□□□□ -0.53
SFXN1-204ENST00000502865 ZFYP08048 801 aaPredicted RBP11.74□□□□□ -0.53
SFXN1-204ENST00000502865 UBE3CQ15386 1083 aa11.74□□□□□ -0.53
SFXN1-204ENST00000502865 CCDC93Q567U6 631 aa11.74□□□□□ -0.53
SFXN1-204ENST00000502865 ZSCAN25Q6NSZ9 544 aa11.74□□□□□ -0.53
SFXN1-204ENST00000502865 MAGEB6Q8N7X4 407 aa11.74□□□□□ -0.53
SFXN1-204ENST00000502865 ZNF384Q8TF68 577 aa11.74□□□□□ -0.53
SFXN1-204ENST00000502865 APPBP2Q92624 585 aa11.74□□□□□ -0.53
SFXN1-204ENST00000502865 EYA3Q99504 573 aa11.74□□□□□ -0.53
SFXN1-204ENST00000502865 KIF2CQ99661 725 aa11.74□□□□□ -0.53
SFXN1-204ENST00000502865 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.74□□□□□ -0.532e-6■□□□□ 11.2
SFXN1-204ENST00000502865 COA1Q9GZY4 146 aa11.74□□□□□ -0.53
SFXN1-204ENST00000502865 LRP2BPQ9P2M1 347 aa11.74□□□□□ -0.53
SFXN1-204ENST00000502865 MAP3K12Q12852 859 aa11.73□□□□□ -0.53
SFXN1-204ENST00000502865 DALRD3Q5D0E6 543 aaKnown RBP11.73□□□□□ -0.53
SFXN1-204ENST00000502865 CCDC171Q6TFL3 1326 aa11.73□□□□□ -0.53
SFXN1-204ENST00000502865 ADGRA1Q86SQ6 560 aa11.73□□□□□ -0.53
SFXN1-204ENST00000502865 KCNQ5Q9NR82 932 aa11.73□□□□□ -0.53
SFXN1-204ENST00000502865 RAI14Q9P0K7 980 aa11.73□□□□□ -0.53
SFXN1-204ENST00000502865 PALD1Q9ULE6 856 aa11.73□□□□□ -0.53
SFXN1-204ENST00000502865 FAM205AQ6ZU69 1335 aa11.72□□□□□ -0.53
SFXN1-204ENST00000502865 SALL1Q9NSC2 1324 aa11.72□□□□□ -0.53
SFXN1-204ENST00000502865 PRDX5P30044 214 aa11.72□□□□□ -0.53
SFXN1-204ENST00000502865 GTF2IP78347 998 aa11.72□□□□□ -0.53
SFXN1-204ENST00000502865 AOC3Q16853 763 aa11.72□□□□□ -0.53
SFXN1-204ENST00000502865 LRRFIP1Q32MZ4 808 aaKnown RBP11.72□□□□□ -0.53
SFXN1-204ENST00000502865 VPS53Q5VIR6 699 aa11.72□□□□□ -0.53
SFXN1-204ENST00000502865 KIAA1211Q6ZU35 1233 aa11.72□□□□□ -0.53
SFXN1-204ENST00000502865 ERICH6Q7L0X2 663 aa11.72□□□□□ -0.53
SFXN1-204ENST00000502865 RTKN2Q8IZC4 609 aa11.72□□□□□ -0.53
SFXN1-204ENST00000502865 WDR66Q8TBY9 1149 aa11.72□□□□□ -0.53
SFXN1-204ENST00000502865 MAP4K1Q92918 833 aa11.72□□□□□ -0.53
SFXN1-204ENST00000502865 NSUN4Q96CB9 384 aaKnown RBP11.72□□□□□ -0.53
SFXN1-204ENST00000502865 DBNDD1Q9H9R9 158 aa11.72□□□□□ -0.53
SFXN1-204ENST00000502865 SCN9AQ15858 1988 aa11.72□□□□□ -0.53
SFXN1-204ENST00000502865 FER1L6Q2WGJ9 1857 aa11.72□□□□□ -0.53
SFXN1-204ENST00000502865 CCDC88AQ3V6T2 1871 aa11.72□□□□□ -0.53
SFXN1-204ENST00000502865 ZNF646O15015 1829 aaPredicted RBP11.72□□□□□ -0.53
SFXN1-204ENST00000502865 FOXP2O15409 715 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms