RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 IQSEC3Q9UPP2 1182 aaPredicted RBP19.16■□□□□ 0.66
CPNE1-228ENST00000498814 SEMA3EO15041 775 aa19.15■□□□□ 0.66
CPNE1-228ENST00000498814 FRAT2O75474 233 aaPredicted RBP19.15■□□□□ 0.66
CPNE1-228ENST00000498814 CENPBP07199 599 aaPredicted RBP19.15■□□□□ 0.66
CPNE1-228ENST00000498814 PHKA1P46020 1223 aa19.15■□□□□ 0.66
CPNE1-228ENST00000498814 HDAC1Q13547 482 aaPredicted RBP19.15■□□□□ 0.66
CPNE1-228ENST00000498814 EAF2Q96CJ1 260 aaPredicted RBP19.15■□□□□ 0.66
CPNE1-228ENST00000498814 MXD3Q9BW11 206 aa19.15■□□□□ 0.66
CPNE1-228ENST00000498814 H7C1D1 291 aa19.14■□□□□ 0.65
CPNE1-228ENST00000498814 GORABQ5T7V8 394 aa19.14■□□□□ 0.65
CPNE1-228ENST00000498814 PNMA8AQ86V59 439 aaPredicted RBP19.14■□□□□ 0.65
CPNE1-228ENST00000498814 MICALL2Q8IY33 904 aa19.14■□□□□ 0.65
CPNE1-228ENST00000498814 C16orf71Q8IYS4 520 aaPredicted RBP19.14■□□□□ 0.65
CPNE1-228ENST00000498814 ADARB2Q9NS39 739 aaKnown RBP19.14■□□□□ 0.65
CPNE1-228ENST00000498814 APBB1O00213 710 aa19.13■□□□□ 0.65
CPNE1-228ENST00000498814 USP17L8P0C7I0 530 aa19.13■□□□□ 0.65
CPNE1-228ENST00000498814 MMP14P50281 582 aa19.13■□□□□ 0.65
CPNE1-228ENST00000498814 ZNF280AP59817 542 aaPredicted RBP19.13■□□□□ 0.65
CPNE1-228ENST00000498814 CLASRPQ8N2M8 674 aaKnown RBP19.13■□□□□ 0.65
CPNE1-228ENST00000498814 CERS5Q8N5B7 392 aa19.13■□□□□ 0.65
CPNE1-228ENST00000498814 TBC1D22AQ8WUA7 517 aa19.13■□□□□ 0.65
CPNE1-228ENST00000498814 DBNDD2Q9BQY9 259 aa19.13■□□□□ 0.65
CPNE1-228ENST00000498814 IL1RAPL2Q9NP60 686 aa19.13■□□□□ 0.65
CPNE1-228ENST00000498814 JAG2Q9Y219 1238 aa19.13■□□□□ 0.65
CPNE1-228ENST00000498814 ADAMTSL1Q8N6G6 1762 aa19.13■□□□□ 0.65
CPNE1-228ENST00000498814 SHTN1A0MZ66 631 aa19.12■□□□□ 0.65
CPNE1-228ENST00000498814 TOMM70O94826 608 aa19.12■□□□□ 0.65
CPNE1-228ENST00000498814 USP50Q70EL3 339 aaPredicted RBP19.12■□□□□ 0.65
CPNE1-228ENST00000498814 AACSQ86V21 672 aa19.12■□□□□ 0.65
CPNE1-228ENST00000498814 LRRCC1Q9C099 1032 aa19.12■□□□□ 0.65
CPNE1-228ENST00000498814 CCDC8Q9H0W5 538 aaPredicted RBP19.12■□□□□ 0.65
CPNE1-228ENST00000498814 DBNLQ9UJU6 430 aaKnown RBP19.12■□□□□ 0.65
CPNE1-228ENST00000498814 DENND2AQ9ULE3 1009 aa19.12■□□□□ 0.65
CPNE1-228ENST00000498814 COL1A1P02452 1464 aaPredicted RBP19.11■□□□□ 0.65
CPNE1-228ENST00000498814 PDS5AQ29RF7 1337 aaKnown RBP19.11■□□□□ 0.65
CPNE1-228ENST00000498814 ARID4AP29374 1257 aaPredicted RBP19.11■□□□□ 0.65
CPNE1-228ENST00000498814 CHAF1AQ13111 956 aaPredicted RBP19.11■□□□□ 0.65
CPNE1-228ENST00000498814 CCDC158Q5M9N0 1113 aa19.11■□□□□ 0.65
CPNE1-228ENST00000498814 MFSD14BQ5SR56 506 aa19.11■□□□□ 0.65
CPNE1-228ENST00000498814 WDR66Q8TBY9 1149 aa19.11■□□□□ 0.65
CPNE1-228ENST00000498814 AKAP11Q9UKA4 1901 aa19.11■□□□□ 0.65
CPNE1-228ENST00000498814 UQCRFS1P1P0C7P4 283 aa19.1■□□□□ 0.65
CPNE1-228ENST00000498814 RASGRF1Q13972 1273 aa19.1■□□□□ 0.65
CPNE1-228ENST00000498814 KIAA0825Q8IV33 1275 aa19.1■□□□□ 0.65
CPNE1-228ENST00000498814 OGFOD1Q8N543 542 aa19.1■□□□□ 0.65
CPNE1-228ENST00000498814 RBM46Q8TBY0 533 aaKnown RBP19.1■□□□□ 0.65
CPNE1-228ENST00000498814 ZNF512BQ96KM6 892 aaPredicted RBP19.1■□□□□ 0.65
CPNE1-228ENST00000498814 RWDD1Q9H446 243 aaPredicted RBP19.1■□□□□ 0.65
CPNE1-228ENST00000498814 TLR7Q9NYK1 1049 aaKnown RBP19.1■□□□□ 0.65
CPNE1-228ENST00000498814 EAPPQ56P03 285 aaPredicted RBP19.09■□□□□ 0.65
CPNE1-228ENST00000498814 SAMD7Q7Z3H4 446 aa19.09■□□□□ 0.65
CPNE1-228ENST00000498814 LDHDQ86WU2 507 aa19.09■□□□□ 0.65
CPNE1-228ENST00000498814 GCC1Q96CN9 775 aa19.09■□□□□ 0.65
CPNE1-228ENST00000498814 HDAC9Q9UKV0 1011 aa19.09■□□□□ 0.65
CPNE1-228ENST00000498814 SALL1Q9NSC2 1324 aa19.08■□□□□ 0.65
CPNE1-228ENST00000498814 POTEIP0CG38 1075 aa19.08■□□□□ 0.64
CPNE1-228ENST00000498814 POTEJP0CG39 1038 aa19.08■□□□□ 0.64
CPNE1-228ENST00000498814 HIRAP54198 1017 aaPredicted RBP19.08■□□□□ 0.64
CPNE1-228ENST00000498814 TBC1D10BQ4KMP7 808 aaPredicted RBP19.08■□□□□ 0.64
CPNE1-228ENST00000498814 TTC39AQ5SRH9 613 aa19.08■□□□□ 0.64
CPNE1-228ENST00000498814 TRPM4Q8TD43 1214 aa19.08■□□□□ 0.64
CPNE1-228ENST00000498814 MYOZ2Q9NPC6 264 aa19.08■□□□□ 0.64
CPNE1-228ENST00000498814 SUGT1Q9Y2Z0 365 aa19.08■□□□□ 0.64
CPNE1-228ENST00000498814 POLR2AP24928 1970 aaKnown RBP19.07■□□□□ 0.64
CPNE1-228ENST00000498814 SMARCA5O60264 1052 aaPredicted RBP19.07■□□□□ 0.64
CPNE1-228ENST00000498814 IFIT2P09913 472 aaKnown RBP19.07■□□□□ 0.64
CPNE1-228ENST00000498814 KIF4BQ2VIQ3 1234 aa19.07■□□□□ 0.64
CPNE1-228ENST00000498814 SPATA5Q8NB90 893 aa19.07■□□□□ 0.64
CPNE1-228ENST00000498814 HMG20BQ9P0W2 317 aa19.07■□□□□ 0.64
CPNE1-228ENST00000498814 EGFRP00533 1210 aa19.06■□□□□ 0.64
CPNE1-228ENST00000498814 MCAMP43121 646 aa19.06■□□□□ 0.64
CPNE1-228ENST00000498814 RBM26Q5T8P6 1007 aaKnown RBP19.06■□□□□ 0.64
CPNE1-228ENST00000498814 CHADLQ6NUI6 762 aa19.06■□□□□ 0.64
CPNE1-228ENST00000498814 ZGPATQ8N5A5 531 aaKnown RBP19.06■□□□□ 0.64
CPNE1-228ENST00000498814 SMC1BQ8NDV3 1235 aa19.06■□□□□ 0.64
CPNE1-228ENST00000498814 ZC3H15Q8WU90 426 aaKnown RBP19.06■□□□□ 0.64
CPNE1-228ENST00000498814 PGAP2Q9UHJ9 254 aa19.06■□□□□ 0.64
CPNE1-228ENST00000498814 TTF2Q9UNY4 1162 aaKnown RBP19.06■□□□□ 0.64
CPNE1-228ENST00000498814 CLEC11AQ9Y240 323 aa19.06■□□□□ 0.64
CPNE1-228ENST00000498814 ECM29Q5VYK3 1845 aa19.05■□□□□ 0.64
CPNE1-228ENST00000498814 F8W031 263 aaPredicted RBP19.05■□□□□ 0.64
CPNE1-228ENST00000498814 IGHDP01880 384 aa19.05■□□□□ 0.64
CPNE1-228ENST00000498814 FSTL1Q12841 308 aa19.05■□□□□ 0.64
CPNE1-228ENST00000498814 SCARF1Q14162 830 aa19.05■□□□□ 0.64
CPNE1-228ENST00000498814 GRIK5Q16478 980 aa19.05■□□□□ 0.64
CPNE1-228ENST00000498814 SMC5Q8IY18 1101 aa19.05■□□□□ 0.64
CPNE1-228ENST00000498814 MTMR14Q8NCE2 650 aa19.05■□□□□ 0.64
CPNE1-228ENST00000498814 HDLBPQ00341 1268 aaKnown RBP19.04■□□□□ 0.64
CPNE1-228ENST00000498814 PI16Q6UXB8 463 aa19.04■□□□□ 0.64
CPNE1-228ENST00000498814 ZBED3Q96IU2 234 aaPredicted RBP19.04■□□□□ 0.64
CPNE1-228ENST00000498814 MRIQ9BWK5 157 aa19.04■□□□□ 0.64
CPNE1-228ENST00000498814 BCL11AQ9H165 835 aa19.04■□□□□ 0.64
CPNE1-228ENST00000498814 SERPINA10Q9UK55 444 aa19.04■□□□□ 0.64
CPNE1-228ENST00000498814 MAST3O60307 1309 aa19.03■□□□□ 0.64
CPNE1-228ENST00000498814 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.03■□□□□ 0.64
CPNE1-228ENST00000498814 MYO5AQ9Y4I1 1855 aaKnown RBP19.03■□□□□ 0.64
CPNE1-228ENST00000498814 WNT10BO00744 389 aa19.02■□□□□ 0.64
CPNE1-228ENST00000498814 LDHBP07195 334 aaKnown RBP19.02■□□□□ 0.64
CPNE1-228ENST00000498814 PRDX5P30044 214 aa19.02■□□□□ 0.64
CPNE1-228ENST00000498814 DLGAP5Q15398 846 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms