RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 IL22RA1Q8N6P7 574 aa7.97□□□□□ -1.13
VPS36-206ENST00000497149 SCARF2Q96GP6 870 aaPredicted RBP7.97□□□□□ -1.13
VPS36-206ENST00000497149 PRDM6Q9NQX0 595 aa7.97□□□□□ -1.13
VPS36-206ENST00000497149 SH2B1Q9NRF2 756 aaPredicted RBP7.97□□□□□ -1.13
VPS36-206ENST00000497149 ENAMQ9NRM1 1142 aa7.97□□□□□ -1.13
VPS36-206ENST00000497149 SOX13Q9UN79 622 aa7.97□□□□□ -1.13
VPS36-206ENST00000497149 AKAP2Q9Y2D5 859 aa7.97□□□□□ -1.13
VPS36-206ENST00000497149 CDC27P30260 824 aa7.96□□□□□ -1.14
VPS36-206ENST00000497149 MEI1Q5TIA1 1274 aa7.96□□□□□ -1.14
VPS36-206ENST00000497149 VN1R5Q7Z5H4 357 aa7.96□□□□□ -1.14
VPS36-206ENST00000497149 IGSF5Q9NSI5 407 aa7.96□□□□□ -1.14
VPS36-206ENST00000497149 FAM177BA6PVY3 158 aa7.95□□□□□ -1.14
VPS36-206ENST00000497149 SCAMP3O14828 347 aaKnown RBP7.95□□□□□ -1.14
VPS36-206ENST00000497149 HOXB4P17483 251 aaPredicted RBP7.95□□□□□ -1.14
VPS36-206ENST00000497149 BAG6P46379 1132 aa7.95□□□□□ -1.14
VPS36-206ENST00000497149 RPS26P11Q5JNZ5 115 aaPredicted RBP7.95□□□□□ -1.14
VPS36-206ENST00000497149 NEDD1Q8NHV4 660 aa7.95□□□□□ -1.14
VPS36-206ENST00000497149 ANKRD24Q8TF21 1146 aa7.95□□□□□ -1.14
VPS36-206ENST00000497149 ZNF576Q9H609 170 aa7.95□□□□□ -1.14
VPS36-206ENST00000497149 PPM1HQ9ULR3 514 aa7.95□□□□□ -1.14
VPS36-206ENST00000497149 DGKGP49619 791 aa7.94□□□□□ -1.14
VPS36-206ENST00000497149 ST13P50502 369 aaKnown RBP7.94□□□□□ -1.14
VPS36-206ENST00000497149 COL9A3Q14050 684 aaPredicted RBP7.94□□□□□ -1.14
VPS36-206ENST00000497149 CLEC4MQ9H2X3 399 aaPredicted RBP7.94□□□□□ -1.14
VPS36-206ENST00000497149 PPME1Q9Y570 386 aa7.94□□□□□ -1.14
VPS36-206ENST00000497149 IGHA1P01876 353 aa7.93□□□□□ -1.14
VPS36-206ENST00000497149 TCF3P15923 654 aa7.93□□□□□ -1.14
VPS36-206ENST00000497149 EPHA1P21709 976 aa7.93□□□□□ -1.14
VPS36-206ENST00000497149 CABP4P57796 275 aa7.93□□□□□ -1.14
VPS36-206ENST00000497149 ZNF423Q2M1K9 1284 aa7.93□□□□□ -1.14
VPS36-206ENST00000497149 MSL1Q68DK7 614 aa7.93□□□□□ -1.14
VPS36-206ENST00000497149 ILDR2Q71H61 639 aa7.93□□□□□ -1.14
VPS36-206ENST00000497149 WFDC8Q8IUA0 241 aa7.93□□□□□ -1.14
VPS36-206ENST00000497149 RRAGCQ9HB90 399 aa7.93□□□□□ -1.14
VPS36-206ENST00000497149 SEC31BQ9NQW1 1179 aa7.93□□□□□ -1.14
VPS36-206ENST00000497149 METTL5Q9NRN9 209 aaKnown RBP7.93□□□□□ -1.14
VPS36-206ENST00000497149 TTF2Q9UNY4 1162 aaKnown RBP7.93□□□□□ -1.14
VPS36-206ENST00000497149 NID1P14543 1247 aa7.92□□□□□ -1.14
VPS36-206ENST00000497149 FANCCQ00597 558 aa7.92□□□□□ -1.14
VPS36-206ENST00000497149 PCDH1Q08174 1060 aa7.92□□□□□ -1.14
VPS36-206ENST00000497149 FAAP100Q0VG06 881 aa7.92□□□□□ -1.14
VPS36-206ENST00000497149 H3BRJ5 948 aa7.91□□□□□ -1.14
VPS36-206ENST00000497149 LINC01387J3KSC0 135 aa7.91□□□□□ -1.14
VPS36-206ENST00000497149 SOX1O00570 391 aaPredicted RBP7.91□□□□□ -1.14
VPS36-206ENST00000497149 FBXO24O75426 580 aa7.91□□□□□ -1.14
VPS36-206ENST00000497149 ESRRAP11474 423 aaPredicted RBP7.91□□□□□ -1.14
VPS36-206ENST00000497149 CDC25BP30305 580 aa7.91□□□□□ -1.14
VPS36-206ENST00000497149 ZNF76P36508 570 aa7.91□□□□□ -1.14
VPS36-206ENST00000497149 IKBKEQ14164 716 aa7.91□□□□□ -1.14
VPS36-206ENST00000497149 TPTE2Q6XPS3 522 aa7.91□□□□□ -1.14
VPS36-206ENST00000497149 DMRTC2Q8IXT2 367 aaPredicted RBP7.91□□□□□ -1.14
VPS36-206ENST00000497149 CEP44Q9C0F1 390 aa7.91□□□□□ -1.14
VPS36-206ENST00000497149 B3GALT4O96024 378 aa7.9□□□□□ -1.14
VPS36-206ENST00000497149 RANGAP1P46060 587 aaPredicted RBP7.9□□□□□ -1.14
VPS36-206ENST00000497149 SNRPNP63162 240 aaKnown RBP7.9□□□□□ -1.14
VPS36-206ENST00000497149 HDLBPQ00341 1268 aaKnown RBP7.9□□□□□ -1.14
VPS36-206ENST00000497149 LINC00114Q6XXX2 140 aa7.9□□□□□ -1.14
VPS36-206ENST00000497149 SV2BQ7L1I2 683 aa7.9□□□□□ -1.14
VPS36-206ENST00000497149 RNF34Q969K3 372 aa7.9□□□□□ -1.14
VPS36-206ENST00000497149 NECAB3Q96P71 396 aaPredicted RBP7.9□□□□□ -1.14
VPS36-206ENST00000497149 NOC4LQ9BVI4 516 aaKnown RBP7.9□□□□□ -1.14
VPS36-206ENST00000497149 TMEM39AQ9NV64 488 aa7.9□□□□□ -1.14
VPS36-206ENST00000497149 ZNF157P51786 506 aaPredicted RBP7.89□□□□□ -1.15
VPS36-206ENST00000497149 CCDC85BQ15834 202 aaPredicted RBP7.89□□□□□ -1.15
VPS36-206ENST00000497149 FAM117BQ6P1L5 589 aa7.89□□□□□ -1.15
VPS36-206ENST00000497149 TXNDC11Q6PKC3 985 aa7.89□□□□□ -1.15
VPS36-206ENST00000497149 METTL16Q86W50 562 aaKnown RBP7.89□□□□□ -1.15
VPS36-206ENST00000497149 GPN3Q9UHW5 284 aaPredicted RBP7.89□□□□□ -1.15
VPS36-206ENST00000497149 LOC100996750A0A140TA64 210 aa7.88□□□□□ -1.15
VPS36-206ENST00000497149 ENC1O14682 589 aa7.88□□□□□ -1.15
VPS36-206ENST00000497149 PIP4K2BP78356 416 aa7.88□□□□□ -1.15
VPS36-206ENST00000497149 PPP2R3AQ06190 1150 aa7.88□□□□□ -1.15
VPS36-206ENST00000497149 TRAPPC3LQ5T215 181 aa7.88□□□□□ -1.15
VPS36-206ENST00000497149 C9orf131Q5VYM1 1079 aa7.88□□□□□ -1.15
VPS36-206ENST00000497149 HGSNATQ68CP4 663 aa7.88□□□□□ -1.15
VPS36-206ENST00000497149 WNT8BQ93098 351 aa7.88□□□□□ -1.15
VPS36-206ENST00000497149 KRTAP4-6Q9BYQ5 205 aa7.88□□□□□ -1.15
VPS36-206ENST00000497149 FSCN2O14926 492 aa7.87□□□□□ -1.15
VPS36-206ENST00000497149 SETDB1Q15047 1291 aa7.87□□□□□ -1.15
VPS36-206ENST00000497149 HS2ST1Q7LGA3 356 aa7.87□□□□□ -1.15
VPS36-206ENST00000497149 SLC7A3Q8WY07 619 aa7.87□□□□□ -1.15
VPS36-206ENST00000497149 TRIM11Q96F44 468 aa7.87□□□□□ -1.15
VPS36-206ENST00000497149 SOX17Q9H6I2 414 aaPredicted RBP7.87□□□□□ -1.15
VPS36-206ENST00000497149 OSGEPQ9NPF4 335 aa7.87□□□□□ -1.15
VPS36-206ENST00000497149 GGT7Q9UJ14 662 aa7.87□□□□□ -1.15
VPS36-206ENST00000497149 GNB5O14775 395 aa7.86□□□□□ -1.15
VPS36-206ENST00000497149 CELA3AP09093 270 aa7.86□□□□□ -1.15
VPS36-206ENST00000497149 ARL4DP49703 201 aa7.86□□□□□ -1.15
VPS36-206ENST00000497149 C19orf57Q0VDD7 668 aa7.86□□□□□ -1.15
VPS36-206ENST00000497149 ERMP1Q7Z2K6 904 aa7.86□□□□□ -1.15
VPS36-206ENST00000497149 NT5DC4Q86YG4 428 aa7.86□□□□□ -1.15
VPS36-206ENST00000497149 MAP4K3Q8IVH8 894 aa7.86□□□□□ -1.15
VPS36-206ENST00000497149 DTWD1Q8N5C7 304 aa7.86□□□□□ -1.15
VPS36-206ENST00000497149 DDX54Q8TDD1 881 aaKnown RBP7.86□□□□□ -1.15
VPS36-206ENST00000497149 TRIM56Q9BRZ2 755 aaKnown RBP7.86□□□□□ -1.15
VPS36-206ENST00000497149 PLVAPQ9BX97 442 aa7.86□□□□□ -1.15
VPS36-206ENST00000497149 MKL2Q9ULH7 1088 aa7.86□□□□□ -1.15
VPS36-206ENST00000497149 TM4SF5O14894 197 aa7.85□□□□□ -1.15
VPS36-206ENST00000497149 DEAF1O75398 565 aaPredicted RBP7.85□□□□□ -1.15
VPS36-206ENST00000497149 PAGE1O75459 146 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms