RNA–Protein interactions for RNA: ENST00000496441.5

CDCA7-208, Transcript of cell division cycle associated 7, humanhuman

TSL 2

Gene CDCA7, Length 2,943 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-208ENST00000496441 CSF1RP07333 972 aa13.53□□□□□ -0.24
CDCA7-208ENST00000496441 UVSSAQ2YD98 709 aa13.53□□□□□ -0.24
CDCA7-208ENST00000496441 CCDC102BQ68D86 513 aa13.53□□□□□ -0.24
CDCA7-208ENST00000496441 CCDC82Q8N4S0 544 aa13.53□□□□□ -0.24
CDCA7-208ENST00000496441 ZNF532Q9HCE3 1301 aa13.53□□□□□ -0.24
CDCA7-208ENST00000496441 FDPSP14324 419 aaKnown RBP13.53□□□□□ -0.24
CDCA7-208ENST00000496441 ATP6V1AP38606 617 aa13.53□□□□□ -0.24
CDCA7-208ENST00000496441 RRP12Q5JTH9 1297 aaKnown RBP13.53□□□□□ -0.24
CDCA7-208ENST00000496441 SMARCC2Q8TAQ2 1214 aa13.53□□□□□ -0.24
CDCA7-208ENST00000496441 TRIM5Q9C035 493 aa13.53□□□□□ -0.24
CDCA7-208ENST00000496441 CBX8Q9HC52 389 aa13.53□□□□□ -0.24
CDCA7-208ENST00000496441 SENP2Q9HC62 589 aa13.53□□□□□ -0.24
CDCA7-208ENST00000496441 FAM13BQ9NYF5 915 aa13.53□□□□□ -0.24
CDCA7-208ENST00000496441 TOGARAM1Q9Y4F4 1720 aa13.53□□□□□ -0.24
CDCA7-208ENST00000496441 ELP1O95163 1332 aa13.52□□□□□ -0.24
CDCA7-208ENST00000496441 B4E1Z4 1266 aa13.52□□□□□ -0.24
CDCA7-208ENST00000496441 MCM5P33992 734 aa13.52□□□□□ -0.24
CDCA7-208ENST00000496441 MICU3Q86XE3 530 aa13.52□□□□□ -0.24
CDCA7-208ENST00000496441 FAM200AQ8TCP9 573 aa13.52□□□□□ -0.24
CDCA7-208ENST00000496441 MPHOSPH8Q99549 860 aa13.52□□□□□ -0.24
CDCA7-208ENST00000496441 GOLPH3LQ9H4A5 285 aa13.52□□□□□ -0.24
CDCA7-208ENST00000496441 CTNNA3Q9UI47 895 aa13.52□□□□□ -0.24
CDCA7-208ENST00000496441 PDE8BO95263 885 aa13.52□□□□□ -0.25
CDCA7-208ENST00000496441 ADD1P35611 737 aaKnown RBP13.52□□□□□ -0.25
CDCA7-208ENST00000496441 ZNF165P49910 485 aa13.52□□□□□ -0.25
CDCA7-208ENST00000496441 TRDNQ13061 729 aa13.52□□□□□ -0.25
CDCA7-208ENST00000496441 SF3A1Q15459 793 aaKnown RBP13.52□□□□□ -0.25
CDCA7-208ENST00000496441 TSC1Q92574 1164 aa13.52□□□□□ -0.25
CDCA7-208ENST00000496441 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.52□□□□□ -0.25
CDCA7-208ENST00000496441 ZSCAN16Q9H4T2 348 aaPredicted RBP13.52□□□□□ -0.25
CDCA7-208ENST00000496441 ORC3Q9UBD5 711 aaPredicted RBP13.52□□□□□ -0.25
CDCA7-208ENST00000496441 UBR2Q8IWV8 1755 aa13.52□□□□□ -0.25
CDCA7-208ENST00000496441 RFX7Q2KHR2 1363 aa13.52□□□□□ -0.25
CDCA7-208ENST00000496441 TNS2Q63HR2 1409 aa13.51□□□□□ -0.25
CDCA7-208ENST00000496441 UQCRHLA0A096LP55 91 aa13.51□□□□□ -0.25
CDCA7-208ENST00000496441 A0A1B0GVL5 298 aa13.51□□□□□ -0.25
CDCA7-208ENST00000496441 WTIPA6NIX2 430 aaPredicted RBP13.51□□□□□ -0.25
CDCA7-208ENST00000496441 UQCRHP07919 91 aa13.51□□□□□ -0.25
CDCA7-208ENST00000496441 ANTXR2P58335 489 aa13.51□□□□□ -0.25
CDCA7-208ENST00000496441 LRRFIP1Q32MZ4 808 aaKnown RBP13.51□□□□□ -0.25
CDCA7-208ENST00000496441 SUSD4Q5VX71 490 aa13.51□□□□□ -0.25
CDCA7-208ENST00000496441 BICDL1Q6ZP65 573 aa13.51□□□□□ -0.25
CDCA7-208ENST00000496441 NCOA7Q8NI08 942 aa13.51□□□□□ -0.25
CDCA7-208ENST00000496441 PHKBQ93100 1093 aa13.51□□□□□ -0.25
CDCA7-208ENST00000496441 ZKSCAN3Q9BRR0 538 aa13.51□□□□□ -0.25
CDCA7-208ENST00000496441 NRBP1Q9UHY1 535 aa13.51□□□□□ -0.25
CDCA7-208ENST00000496441 CARMIL3Q8ND23 1372 aa13.51□□□□□ -0.25
CDCA7-208ENST00000496441 MYO5AQ9Y4I1 1855 aaKnown RBP13.51□□□□□ -0.25
CDCA7-208ENST00000496441 UBE2Q2LH0YL09 131 aa13.51□□□□□ -0.25
CDCA7-208ENST00000496441 HMGN5P82970 282 aaKnown RBP13.51□□□□□ -0.25
CDCA7-208ENST00000496441 CTDSPL2Q05D32 466 aa13.51□□□□□ -0.25
CDCA7-208ENST00000496441 TRIM28Q13263 835 aaKnown RBP13.51□□□□□ -0.25
CDCA7-208ENST00000496441 AIDAQ96BJ3 306 aa13.51□□□□□ -0.25
CDCA7-208ENST00000496441 C8orf76Q96K31 380 aa13.51□□□□□ -0.25
CDCA7-208ENST00000496441 CLSTN2Q9H4D0 955 aa13.51□□□□□ -0.25
CDCA7-208ENST00000496441 PTGS1P23219 599 aa13.5□□□□□ -0.25
CDCA7-208ENST00000496441 HSP90AA2PQ14568 343 aaPredicted RBP13.5□□□□□ -0.25
CDCA7-208ENST00000496441 ISM2Q6H9L7 571 aa13.5□□□□□ -0.25
CDCA7-208ENST00000496441 NFXL1Q6ZNB6 911 aa13.5□□□□□ -0.25
CDCA7-208ENST00000496441 ILDR1Q86SU0 546 aaPredicted RBP13.5□□□□□ -0.25
CDCA7-208ENST00000496441 TBC1D10CQ8IV04 446 aa13.5□□□□□ -0.25
CDCA7-208ENST00000496441 MAGEB6Q8N7X4 407 aa13.5□□□□□ -0.25
CDCA7-208ENST00000496441 FSIP1Q8NA03 581 aa13.5□□□□□ -0.25
CDCA7-208ENST00000496441 MIGA1Q8NAN2 632 aa13.5□□□□□ -0.25
CDCA7-208ENST00000496441 SHANK3Q9BYB0 1731 aa13.5□□□□□ -0.25
CDCA7-208ENST00000496441 PDE8AO60658 829 aa13.5□□□□□ -0.25
CDCA7-208ENST00000496441 ZFYP08048 801 aaPredicted RBP13.5□□□□□ -0.25
CDCA7-208ENST00000496441 CCDC73Q6ZRK6 1079 aa13.5□□□□□ -0.25
CDCA7-208ENST00000496441 VSIG10Q8N0Z9 540 aa13.5□□□□□ -0.25
CDCA7-208ENST00000496441 DDX19AQ9NUU7 478 aaKnown RBP13.5□□□□□ -0.25
CDCA7-208ENST00000496441 KIF3AQ9Y496 699 aa13.5□□□□□ -0.25
CDCA7-208ENST00000496441 CLIC4Q9Y696 253 aa13.5□□□□□ -0.25
CDCA7-208ENST00000496441 RIC1Q4ADV7 1423 aa13.5□□□□□ -0.25
CDCA7-208ENST00000496441 BCAMP50895 628 aa13.5□□□□□ -0.25
CDCA7-208ENST00000496441 CYB5R4Q7L1T6 521 aa13.5□□□□□ -0.25
CDCA7-208ENST00000496441 CCDC24Q8N4L8 307 aa13.5□□□□□ -0.25
CDCA7-208ENST00000496441 LLPHQ9BRT6 129 aaKnown RBP13.5□□□□□ -0.25
CDCA7-208ENST00000496441 ARMT1Q9H993 441 aa13.5□□□□□ -0.25
CDCA7-208ENST00000496441 PRKAB2O43741 272 aa13.49□□□□□ -0.25
CDCA7-208ENST00000496441 LRMPQ12912 555 aa13.49□□□□□ -0.25
CDCA7-208ENST00000496441 NOLC1Q14978 699 aaKnown RBP eCLIP13.49□□□□□ -0.25
CDCA7-208ENST00000496441 ZNF274Q96GC6 653 aaPredicted RBP13.49□□□□□ -0.25
CDCA7-208ENST00000496441 DNAJC5Q9H3Z4 198 aa13.49□□□□□ -0.25
CDCA7-208ENST00000496441 PYCARDQ9ULZ3 195 aa13.49□□□□□ -0.25
CDCA7-208ENST00000496441 BIN1O00499 593 aa13.49□□□□□ -0.25
CDCA7-208ENST00000496441 KINO60870 393 aaKnown RBP13.49□□□□□ -0.25
CDCA7-208ENST00000496441 PDE6AP16499 860 aa13.49□□□□□ -0.25
CDCA7-208ENST00000496441 MARCKSP29966 332 aaPredicted RBP13.49□□□□□ -0.25
CDCA7-208ENST00000496441 ADD2P35612 726 aa13.49□□□□□ -0.25
CDCA7-208ENST00000496441 STK38Q15208 465 aa13.49□□□□□ -0.25
CDCA7-208ENST00000496441 DDB1Q16531 1140 aa13.49□□□□□ -0.25
CDCA7-208ENST00000496441 C11orf57Q6ZUT1 292 aaPredicted RBP13.49□□□□□ -0.25
CDCA7-208ENST00000496441 CMTR1Q8N1G2 835 aaKnown RBP13.49□□□□□ -0.25
CDCA7-208ENST00000496441 SDF4Q9BRK5 362 aa13.49□□□□□ -0.25
CDCA7-208ENST00000496441 NBPF3Q9H094 633 aa13.49□□□□□ -0.25
CDCA7-208ENST00000496441 ABCF2Q9UG63 623 aa13.49□□□□□ -0.25
CDCA7-208ENST00000496441 NIP7Q9Y221 180 aaKnown RBP eCLIP13.49□□□□□ -0.25
CDCA7-208ENST00000496441 STRCQ7RTU9 1775 aa13.48□□□□□ -0.25
CDCA7-208ENST00000496441 KCNQ2O43526 872 aa13.48□□□□□ -0.25
CDCA7-208ENST00000496441 CRKLP46109 303 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms