RNA–Protein interactions for RNA: ENST00000496427.5

CHCHD3-206, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5

Gene CHCHD3, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-206ENST00000496427 GPSM2P81274 684 aa9.09□□□□□ -0.95
CHCHD3-206ENST00000496427 KIF23Q02241 960 aaPredicted RBP9.09□□□□□ -0.95
CHCHD3-206ENST00000496427 KCNC4Q03721 635 aa9.09□□□□□ -0.95
CHCHD3-206ENST00000496427 TCIRG1Q13488 830 aa9.09□□□□□ -0.95
CHCHD3-206ENST00000496427 WASHC4Q2M389 1173 aa9.09□□□□□ -0.95
CHCHD3-206ENST00000496427 PROX2Q3B8N5 592 aa9.09□□□□□ -0.95
CHCHD3-206ENST00000496427 HSP90AB3PQ58FF7 597 aa9.09□□□□□ -0.95
CHCHD3-206ENST00000496427 ZFRQ96KR1 1074 aaKnown RBP9.09□□□□□ -0.95
CHCHD3-206ENST00000496427 GGA3Q9NZ52 723 aa9.09□□□□□ -0.95
CHCHD3-206ENST00000496427 POLLQ9UGP5 575 aa9.09□□□□□ -0.95
CHCHD3-206ENST00000496427 ATP5J2-PTCD1G3V325 749 aa9.08□□□□□ -0.96
CHCHD3-206ENST00000496427 C6orf229H3BNL8 230 aa9.08□□□□□ -0.96
CHCHD3-206ENST00000496427 TRPA1O75762 1119 aa9.08□□□□□ -0.96
CHCHD3-206ENST00000496427 ZNF157P51786 506 aaPredicted RBP9.08□□□□□ -0.96
CHCHD3-206ENST00000496427 RIPK4P57078 832 aa9.08□□□□□ -0.96
CHCHD3-206ENST00000496427 KIF4BQ2VIQ3 1234 aa9.08□□□□□ -0.96
CHCHD3-206ENST00000496427 FAM89AQ96GI7 184 aa9.08□□□□□ -0.96
CHCHD3-206ENST00000496427 CHPF2Q9P2E5 772 aa9.08□□□□□ -0.96
CHCHD3-206ENST00000496427 NSFL1CQ9UNZ2 370 aaKnown RBP9.08□□□□□ -0.96
CHCHD3-206ENST00000496427 SCAF8Q9UPN6 1271 aaKnown RBP9.08□□□□□ -0.96
CHCHD3-206ENST00000496427 OTOFQ9HC10 1997 aa9.07□□□□□ -0.96
CHCHD3-206ENST00000496427 GTPBP6O43824 516 aaPredicted RBP9.07□□□□□ -0.96
CHCHD3-206ENST00000496427 SLC10A3P09131 477 aa9.07□□□□□ -0.96
CHCHD3-206ENST00000496427 COL9A1P20849 921 aa9.07□□□□□ -0.96
CHCHD3-206ENST00000496427 BCAMP50895 628 aa9.07□□□□□ -0.96
CHCHD3-206ENST00000496427 LAPTM4AQ15012 233 aa9.07□□□□□ -0.96
CHCHD3-206ENST00000496427 Q6ZNB5 142 aa9.07□□□□□ -0.96
CHCHD3-206ENST00000496427 C2orf69Q8N8R5 385 aa9.07□□□□□ -0.96
CHCHD3-206ENST00000496427 DPF2Q92785 391 aa9.07□□□□□ -0.96
CHCHD3-206ENST00000496427 DCPSQ96C86 337 aaKnown RBP9.07□□□□□ -0.96
CHCHD3-206ENST00000496427 EPAS1Q99814 870 aa9.07□□□□□ -0.96
CHCHD3-206ENST00000496427 EMILIN3Q9NT22 766 aa9.07□□□□□ -0.96
CHCHD3-206ENST00000496427 RNF186Q9NXI6 227 aa9.07□□□□□ -0.96
CHCHD3-206ENST00000496427 LAS1LQ9Y4W2 734 aaKnown RBP9.07□□□□□ -0.96
CHCHD3-206ENST00000496427 RBBP6Q7Z6E9 1792 aaKnown RBP9.07□□□□□ -0.96
CHCHD3-206ENST00000496427 TMPOP42166 694 aaKnown RBP9.06□□□□□ -0.96
CHCHD3-206ENST00000496427 NEUROD2Q15784 382 aa9.06□□□□□ -0.96
CHCHD3-206ENST00000496427 RASAL3Q86YV0 1011 aa9.06□□□□□ -0.96
CHCHD3-206ENST00000496427 CCDC146Q8IYE0 955 aa9.06□□□□□ -0.96
CHCHD3-206ENST00000496427 TBC1D16Q8TBP0 767 aa9.06□□□□□ -0.96
CHCHD3-206ENST00000496427 CDCA5Q96FF9 252 aa9.06□□□□□ -0.96
CHCHD3-206ENST00000496427 CSRNP1Q96S65 589 aa9.06□□□□□ -0.96
CHCHD3-206ENST00000496427 SEC31BQ9NQW1 1179 aa9.06□□□□□ -0.96
CHCHD3-206ENST00000496427 SAGE1Q9NXZ1 904 aa9.06□□□□□ -0.96
CHCHD3-206ENST00000496427 ANGEL2Q5VTE6 544 aaKnown RBP9.05□□□□□ -0.96
CHCHD3-206ENST00000496427 MOB2Q70IA6 237 aa9.05□□□□□ -0.96
CHCHD3-206ENST00000496427 TMC4Q7Z404 712 aa9.05□□□□□ -0.96
CHCHD3-206ENST00000496427 ISCA1Q9BUE6 129 aa9.05□□□□□ -0.96
CHCHD3-206ENST00000496427 KIAA1468Q9P260 1216 aa9.05□□□□□ -0.96
CHCHD3-206ENST00000496427 IRS4O14654 1257 aaPredicted RBP9.04□□□□□ -0.96
CHCHD3-206ENST00000496427 UFL1O94874 794 aa9.04□□□□□ -0.96
CHCHD3-206ENST00000496427 RPS12P25398 132 aaKnown RBP9.04□□□□□ -0.96
CHCHD3-206ENST00000496427 SF3B3Q15393 1217 aaKnown RBP9.04□□□□□ -0.96
CHCHD3-206ENST00000496427 HDGFL1Q5TGJ6 251 aa9.04□□□□□ -0.96
CHCHD3-206ENST00000496427 SULF1Q8IWU6 871 aa9.04□□□□□ -0.96
CHCHD3-206ENST00000496427 PLBD2Q8NHP8 589 aa9.04□□□□□ -0.96
CHCHD3-206ENST00000496427 JARID2Q92833 1246 aaPredicted RBP9.04□□□□□ -0.96
CHCHD3-206ENST00000496427 CCDC102AQ96A19 550 aa9.04□□□□□ -0.96
CHCHD3-206ENST00000496427 CCDC85AQ96PX6 553 aaPredicted RBP9.04□□□□□ -0.96
CHCHD3-206ENST00000496427 EYA3Q99504 573 aa9.04□□□□□ -0.96
CHCHD3-206ENST00000496427 VIL1P09327 827 aaKnown RBP9.03□□□□□ -0.96
CHCHD3-206ENST00000496427 SCARF1Q14162 830 aa9.03□□□□□ -0.96
CHCHD3-206ENST00000496427 PRAMEF18Q5VWM3 479 aa9.03□□□□□ -0.96
CHCHD3-206ENST00000496427 CTU1Q7Z7A3 348 aaKnown RBP9.03□□□□□ -0.96
CHCHD3-206ENST00000496427 PNNQ9H307 717 aaKnown RBP9.03□□□□□ -0.96
CHCHD3-206ENST00000496427 HPS5Q9UPZ3 1129 aa9.03□□□□□ -0.96
CHCHD3-206ENST00000496427 ZNF609O15014 1411 aa9.03□□□□□ -0.96
CHCHD3-206ENST00000496427 ZSWIM8A7E2V4 1837 aa9.03□□□□□ -0.96
CHCHD3-206ENST00000496427 WTIPA6NIX2 430 aaPredicted RBP9.02□□□□□ -0.97
CHCHD3-206ENST00000496427 TRIM6-TRIM34B2RNG4 842 aa9.02□□□□□ -0.97
CHCHD3-206ENST00000496427 CHL1O00533 1208 aa9.02□□□□□ -0.97
CHCHD3-206ENST00000496427 TBC1D8O95759 1140 aa9.02□□□□□ -0.97
CHCHD3-206ENST00000496427 RPS8P62241 208 aaKnown RBP9.02□□□□□ -0.97
CHCHD3-206ENST00000496427 LMOD3Q0VAK6 560 aa9.02□□□□□ -0.97
CHCHD3-206ENST00000496427 C6orf132Q5T0Z8 1188 aa9.02□□□□□ -0.97
CHCHD3-206ENST00000496427 RSBN1LQ6PCB5 846 aaPredicted RBP9.02□□□□□ -0.97
CHCHD3-206ENST00000496427 MXD3Q9BW11 206 aa9.02□□□□□ -0.97
CHCHD3-206ENST00000496427 ZC3H12CQ9C0D7 883 aaKnown RBP9.02□□□□□ -0.97
CHCHD3-206ENST00000496427 PHAXQ9H814 394 aaKnown RBP9.02□□□□□ -0.97
CHCHD3-206ENST00000496427 BABAM1Q9NWV8 329 aa9.02□□□□□ -0.97
CHCHD3-206ENST00000496427 ANKIB1Q9P2G1 1089 aa9.02□□□□□ -0.97
CHCHD3-206ENST00000496427 TSR3Q9UJK0 312 aaKnown RBP9.02□□□□□ -0.97
CHCHD3-206ENST00000496427 GGA1Q9UJY5 639 aa9.02□□□□□ -0.97
CHCHD3-206ENST00000496427 UBE2Q2LH0YL09 131 aa9.01□□□□□ -0.97
CHCHD3-206ENST00000496427 ZNF296Q8WUU4 475 aaPredicted RBP9.01□□□□□ -0.97
CHCHD3-206ENST00000496427 ARAP2Q8WZ64 1704 aa9.01□□□□□ -0.97
CHCHD3-206ENST00000496427 MYD88Q99836 296 aa9.01□□□□□ -0.97
CHCHD3-206ENST00000496427 MYOZ2Q9NPC6 264 aa9.01□□□□□ -0.97
CHCHD3-206ENST00000496427 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.01□□□□□ -0.97
CHCHD3-206ENST00000496427 PODXL2Q9NZ53 605 aa9.01□□□□□ -0.97
CHCHD3-206ENST00000496427 ZNF280AP59817 542 aaPredicted RBP9□□□□□ -0.97
CHCHD3-206ENST00000496427 PRKG1Q13976 671 aa9□□□□□ -0.97
CHCHD3-206ENST00000496427 NBPF9Q3BBW0 867 aa9□□□□□ -0.97
CHCHD3-206ENST00000496427 PRPF38BQ5VTL8 546 aaKnown RBP9□□□□□ -0.97
CHCHD3-206ENST00000496427 DUSP27Q5VZP5 1158 aa9□□□□□ -0.97
CHCHD3-206ENST00000496427 RIC3Q7Z5B4 369 aa9□□□□□ -0.97
CHCHD3-206ENST00000496427 LRCH3Q96II8 777 aa9□□□□□ -0.97
CHCHD3-206ENST00000496427 ZBTB4Q9P1Z0 1013 aaPredicted RBP9□□□□□ -0.97
CHCHD3-206ENST00000496427 DBF4Q9UBU7 674 aaPredicted RBP9□□□□□ -0.97
CHCHD3-206ENST00000496427 HDAC9Q9UKV0 1011 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms