RNA–Protein interactions for RNA: ENST00000496327.1

CNOT3-207, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-207ENST00000496327 XAGE2Q96GT9 111 aa20.59■□□□□ 0.89
CNOT3-207ENST00000496327 NEUROD6Q96NK8 337 aa20.59■□□□□ 0.89
CNOT3-207ENST00000496327 GNL3LQ9NVN8 582 aaKnown RBP20.59■□□□□ 0.89
CNOT3-207ENST00000496327 IQSEC3Q9UPP2 1182 aaPredicted RBP20.59■□□□□ 0.89
CNOT3-207ENST00000496327 JAG2Q9Y219 1238 aa20.59■□□□□ 0.89
CNOT3-207ENST00000496327 ZNF280AP59817 542 aaPredicted RBP20.58■□□□□ 0.89
CNOT3-207ENST00000496327 TNNI3KQ59H18 835 aa20.58■□□□□ 0.89
CNOT3-207ENST00000496327 TRPM4Q8TD43 1214 aa20.58■□□□□ 0.89
CNOT3-207ENST00000496327 CLEC11AQ9Y240 323 aa20.58■□□□□ 0.89
CNOT3-207ENST00000496327 FPGT-TNNI3KV9GXZ4 949 aa20.58■□□□□ 0.89
CNOT3-207ENST00000496327 PHKA1P46020 1223 aa20.57■□□□□ 0.88
CNOT3-207ENST00000496327 MMP14P50281 582 aa20.57■□□□□ 0.88
CNOT3-207ENST00000496327 CHAF1AQ13111 956 aaPredicted RBP20.57■□□□□ 0.88
CNOT3-207ENST00000496327 CCDC102BQ68D86 513 aa20.57■□□□□ 0.88
CNOT3-207ENST00000496327 CHADLQ6NUI6 762 aa20.57■□□□□ 0.88
CNOT3-207ENST00000496327 SAMD7Q7Z3H4 446 aa20.57■□□□□ 0.88
CNOT3-207ENST00000496327 OGFOD1Q8N543 542 aa20.57■□□□□ 0.88
CNOT3-207ENST00000496327 CERS5Q8N5B7 392 aa20.57■□□□□ 0.88
CNOT3-207ENST00000496327 ZBTB22O15209 634 aa20.56■□□□□ 0.88
CNOT3-207ENST00000496327 RAB11FIP3O75154 756 aa20.56■□□□□ 0.88
CNOT3-207ENST00000496327 AAMPQ13685 434 aa20.56■□□□□ 0.88
CNOT3-207ENST00000496327 TBC1D10BQ4KMP7 808 aaPredicted RBP20.56■□□□□ 0.88
CNOT3-207ENST00000496327 MFSD14BQ5SR56 506 aa20.56■□□□□ 0.88
CNOT3-207ENST00000496327 GORABQ5T7V8 394 aa20.56■□□□□ 0.88
CNOT3-207ENST00000496327 KIAA0825Q8IV33 1275 aa20.56■□□□□ 0.88
CNOT3-207ENST00000496327 TBC1D22AQ8WUA7 517 aa20.56■□□□□ 0.88
CNOT3-207ENST00000496327 HDAC9Q9UKV0 1011 aa20.56■□□□□ 0.88
CNOT3-207ENST00000496327 PCDHB15Q9Y5E8 787 aa20.56■□□□□ 0.88
CNOT3-207ENST00000496327 SEMA3EO15041 775 aa20.55■□□□□ 0.88
CNOT3-207ENST00000496327 KIF4BQ2VIQ3 1234 aa20.55■□□□□ 0.88
CNOT3-207ENST00000496327 RBM26Q5T8P6 1007 aaKnown RBP20.55■□□□□ 0.88
CNOT3-207ENST00000496327 RHPN1Q8TCX5 695 aa20.55■□□□□ 0.88
CNOT3-207ENST00000496327 KIF1BPQ96EK5 621 aa20.55■□□□□ 0.88
CNOT3-207ENST00000496327 HIRAP54198 1017 aaPredicted RBP20.54■□□□□ 0.88
CNOT3-207ENST00000496327 ZC3H15Q8WU90 426 aaKnown RBP20.54■□□□□ 0.88
CNOT3-207ENST00000496327 MYOZ2Q9NPC6 264 aa20.54■□□□□ 0.88
CNOT3-207ENST00000496327 DENND2AQ9ULE3 1009 aa20.54■□□□□ 0.88
CNOT3-207ENST00000496327 PSME4Q14997 1843 aa20.54■□□□□ 0.88
CNOT3-207ENST00000496327 EGFRP00533 1210 aa20.53■□□□□ 0.88
CNOT3-207ENST00000496327 WDR66Q8TBY9 1149 aa20.53■□□□□ 0.88
CNOT3-207ENST00000496327 DBNDD2Q9BQY9 259 aa20.53■□□□□ 0.88
CNOT3-207ENST00000496327 COL1A1P02452 1464 aaPredicted RBP20.52■□□□□ 0.88
CNOT3-207ENST00000496327 F8W031 263 aaPredicted RBP20.52■□□□□ 0.88
CNOT3-207ENST00000496327 APBB1O00213 710 aa20.52■□□□□ 0.88
CNOT3-207ENST00000496327 EXOC6Q8TAG9 804 aa20.52■□□□□ 0.88
CNOT3-207ENST00000496327 EAF2Q96CJ1 260 aaPredicted RBP20.52■□□□□ 0.88
CNOT3-207ENST00000496327 IL1RAPL2Q9NP60 686 aa20.52■□□□□ 0.88
CNOT3-207ENST00000496327 UQCRFS1P1P0C7P4 283 aa20.51■□□□□ 0.87
CNOT3-207ENST00000496327 RASGRF1Q13972 1273 aa20.51■□□□□ 0.87
CNOT3-207ENST00000496327 MAP1SQ66K74 1059 aaPredicted RBP20.51■□□□□ 0.87
CNOT3-207ENST00000496327 AACSQ86V21 672 aa20.51■□□□□ 0.87
CNOT3-207ENST00000496327 CLASRPQ8N2M8 674 aaKnown RBP20.51■□□□□ 0.87
CNOT3-207ENST00000496327 CCDC8Q9H0W5 538 aaPredicted RBP20.51■□□□□ 0.87
CNOT3-207ENST00000496327 PGAP2Q9UHJ9 254 aa20.51■□□□□ 0.87
CNOT3-207ENST00000496327 DBNLQ9UJU6 430 aaKnown RBP20.51■□□□□ 0.87
CNOT3-207ENST00000496327 SUGT1Q9Y2Z0 365 aa20.51■□□□□ 0.87
CNOT3-207ENST00000496327 ADAMTSL1Q8N6G6 1762 aa20.51■□□□□ 0.87
CNOT3-207ENST00000496327 PDS5AQ29RF7 1337 aaKnown RBP20.51■□□□□ 0.87
CNOT3-207ENST00000496327 ARID4AP29374 1257 aaPredicted RBP20.5■□□□□ 0.87
CNOT3-207ENST00000496327 CCDC158Q5M9N0 1113 aa20.5■□□□□ 0.87
CNOT3-207ENST00000496327 CNTROBQ8N137 903 aa20.5■□□□□ 0.87
CNOT3-207ENST00000496327 DCTPP1Q9H773 170 aa20.5■□□□□ 0.87
CNOT3-207ENST00000496327 TTF2Q9UNY4 1162 aaKnown RBP20.5■□□□□ 0.87
CNOT3-207ENST00000496327 ZNF646O15015 1829 aaPredicted RBP20.5■□□□□ 0.87
CNOT3-207ENST00000496327 ARAP2Q8WZ64 1704 aa20.5■□□□□ 0.87
CNOT3-207ENST00000496327 TTC39AQ5SRH9 613 aa20.49■□□□□ 0.87
CNOT3-207ENST00000496327 TLR7Q9NYK1 1049 aaKnown RBP20.49■□□□□ 0.87
CNOT3-207ENST00000496327 SALL1Q9NSC2 1324 aa20.49■□□□□ 0.87
CNOT3-207ENST00000496327 SCARF1Q14162 830 aa20.48■□□□□ 0.87
CNOT3-207ENST00000496327 DLGAP5Q15398 846 aa20.48■□□□□ 0.87
CNOT3-207ENST00000496327 GRIK5Q16478 980 aa20.48■□□□□ 0.87
CNOT3-207ENST00000496327 ZGPATQ8N5A5 531 aaKnown RBP20.48■□□□□ 0.87
CNOT3-207ENST00000496327 LRRCC1Q9C099 1032 aa20.48■□□□□ 0.87
CNOT3-207ENST00000496327 GGA3Q9NZ52 723 aa20.48■□□□□ 0.87
CNOT3-207ENST00000496327 WNT10BO00744 389 aa20.47■□□□□ 0.87
CNOT3-207ENST00000496327 ITGBL1O95965 494 aaPredicted RBP20.47■□□□□ 0.87
CNOT3-207ENST00000496327 CFAP100Q494V2 611 aa20.47■□□□□ 0.87
CNOT3-207ENST00000496327 MTMR14Q8NCE2 650 aa20.47■□□□□ 0.87
CNOT3-207ENST00000496327 ZBED3Q96IU2 234 aaPredicted RBP20.47■□□□□ 0.87
CNOT3-207ENST00000496327 ZNF512BQ96KM6 892 aaPredicted RBP20.47■□□□□ 0.87
CNOT3-207ENST00000496327 HMG20BQ9P0W2 317 aa20.47■□□□□ 0.87
CNOT3-207ENST00000496327 MAST3O60307 1309 aa20.47■□□□□ 0.87
CNOT3-207ENST00000496327 IFIT2P09913 472 aaKnown RBP20.46■□□□□ 0.87
CNOT3-207ENST00000496327 HSPA6P17066 643 aa20.46■□□□□ 0.87
CNOT3-207ENST00000496327 IRX6P78412 446 aaPredicted RBP20.46■□□□□ 0.87
CNOT3-207ENST00000496327 HDAC1Q13547 482 aaPredicted RBP20.46■□□□□ 0.87
CNOT3-207ENST00000496327 NBPF9Q3BBW0 867 aa20.46■□□□□ 0.87
CNOT3-207ENST00000496327 SPATA5Q8NB90 893 aa20.46■□□□□ 0.87
CNOT3-207ENST00000496327 DCPSQ96C86 337 aaKnown RBP20.46■□□□□ 0.87
CNOT3-207ENST00000496327 SERPINA10Q9UK55 444 aa20.46■□□□□ 0.87
CNOT3-207ENST00000496327 ASTN2O75129 1339 aaPredicted RBP20.46■□□□□ 0.87
CNOT3-207ENST00000496327 MCAMP43121 646 aa20.45■□□□□ 0.86
CNOT3-207ENST00000496327 RBM5P52756 815 aaKnown RBP eCLIP20.45■□□□□ 0.86
CNOT3-207ENST00000496327 HDLBPQ00341 1268 aaKnown RBP20.45■□□□□ 0.86
CNOT3-207ENST00000496327 ANGEL2Q5VTE6 544 aaKnown RBP20.45■□□□□ 0.86
CNOT3-207ENST00000496327 CDC37L1Q7L3B6 337 aa20.45■□□□□ 0.86
CNOT3-207ENST00000496327 GLIS2Q9BZE0 524 aaPredicted RBP20.45■□□□□ 0.86
CNOT3-207ENST00000496327 PASKQ96RG2 1323 aa20.45■□□□□ 0.86
CNOT3-207ENST00000496327 SPDYE2BA6NHP3 402 aa20.44■□□□□ 0.86
CNOT3-207ENST00000496327 LDHBP07195 334 aaKnown RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms