RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 ATRNO75882 1429 aa13.01□□□□□ -0.33
CMSS1-208ENST00000496116 FOXP2O15409 715 aa13.01□□□□□ -0.33
CMSS1-208ENST00000496116 LIG1P18858 919 aa13.01□□□□□ -0.33
CMSS1-208ENST00000496116 ARID4AP29374 1257 aaPredicted RBP13.01□□□□□ -0.33
CMSS1-208ENST00000496116 EIF5P55010 431 aaKnown RBP13.01□□□□□ -0.33
CMSS1-208ENST00000496116 HAND2P61296 217 aa13.01□□□□□ -0.33
CMSS1-208ENST00000496116 UBE3CQ15386 1083 aa13.01□□□□□ -0.33
CMSS1-208ENST00000496116 SLC9C2Q5TAH2 1124 aa13.01□□□□□ -0.33
CMSS1-208ENST00000496116 CCDC102BQ68D86 513 aa13.01□□□□□ -0.33
CMSS1-208ENST00000496116 BICD2Q8TD16 824 aa13.01□□□□□ -0.33
CMSS1-208ENST00000496116 TNMDQ9H2S6 317 aa13.01□□□□□ -0.33
CMSS1-208ENST00000496116 CCDC87Q9NVE4 849 aa13.01□□□□□ -0.33
CMSS1-208ENST00000496116 USP25Q9UHP3 1055 aa13.01□□□□□ -0.33
CMSS1-208ENST00000496116 SPATA31A1Q5TZJ5 1347 aa13.01□□□□□ -0.33
CMSS1-208ENST00000496116 WDR19Q8NEZ3 1342 aa13.01□□□□□ -0.33
CMSS1-208ENST00000496116 MYH15Q9Y2K3 1946 aa13.01□□□□□ -0.33
CMSS1-208ENST00000496116 LRP5O75197 1615 aa13□□□□□ -0.33
CMSS1-208ENST00000496116 ATP6V1AP38606 617 aa13□□□□□ -0.33
CMSS1-208ENST00000496116 TRDNQ13061 729 aa13□□□□□ -0.33
CMSS1-208ENST00000496116 ZNF396Q96N95 335 aaPredicted RBP13□□□□□ -0.33
CMSS1-208ENST00000496116 DACT1Q9NYF0 836 aa13□□□□□ -0.33
CMSS1-208ENST00000496116 A0A0G2JS52 829 aa13□□□□□ -0.33
CMSS1-208ENST00000496116 PRC1O43663 620 aa13□□□□□ -0.33
CMSS1-208ENST00000496116 KDM4AO75164 1064 aa13□□□□□ -0.33
CMSS1-208ENST00000496116 IDH1O75874 414 aaKnown RBP13□□□□□ -0.33
CMSS1-208ENST00000496116 PARP10Q53GL7 1025 aa13□□□□□ -0.33
CMSS1-208ENST00000496116 PDZRN4Q6ZMN7 1036 aaPredicted RBP13□□□□□ -0.33
CMSS1-208ENST00000496116 MB21D2Q8IYB1 491 aaPredicted RBP13□□□□□ -0.33
CMSS1-208ENST00000496116 MPHOSPH8Q99549 860 aa13□□□□□ -0.33
CMSS1-208ENST00000496116 UTP14AQ9BVJ6 771 aaKnown RBP13□□□□□ -0.33
CMSS1-208ENST00000496116 NCOA5Q9HCD5 579 aaKnown RBP13□□□□□ -0.33
CMSS1-208ENST00000496116 ARAP2Q8WZ64 1704 aa12.99□□□□□ -0.33
CMSS1-208ENST00000496116 CARMIL3Q8ND23 1372 aa12.99□□□□□ -0.33
CMSS1-208ENST00000496116 ADCY5O95622 1261 aa12.99□□□□□ -0.33
CMSS1-208ENST00000496116 SLC5A1P13866 664 aa12.99□□□□□ -0.33
CMSS1-208ENST00000496116 CAMK4Q16566 473 aa12.99□□□□□ -0.33
CMSS1-208ENST00000496116 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.99□□□□□ -0.33
CMSS1-208ENST00000496116 PHKA1P46020 1223 aa12.98□□□□□ -0.33
CMSS1-208ENST00000496116 CRKLP46109 303 aaKnown RBP12.98□□□□□ -0.33
CMSS1-208ENST00000496116 SUSD4Q5VX71 490 aa12.98□□□□□ -0.33
CMSS1-208ENST00000496116 INTS5Q6P9B9 1019 aaKnown RBP12.98□□□□□ -0.33
CMSS1-208ENST00000496116 FAM200AQ8TCP9 573 aa12.98□□□□□ -0.33
CMSS1-208ENST00000496116 CLSTN2Q9H4D0 955 aa12.98□□□□□ -0.33
CMSS1-208ENST00000496116 NRAPQ86VF7 1730 aa12.98□□□□□ -0.33
CMSS1-208ENST00000496116 ZNF532Q9HCE3 1301 aa12.98□□□□□ -0.33
CMSS1-208ENST00000496116 LOC102724428A0A0B4J2F2 783 aa12.98□□□□□ -0.33
CMSS1-208ENST00000496116 ADAMTS2O95450 1211 aa12.98□□□□□ -0.33
CMSS1-208ENST00000496116 FGFR2P21802 821 aa12.98□□□□□ -0.33
CMSS1-208ENST00000496116 SIK1P57059 783 aa12.98□□□□□ -0.33
CMSS1-208ENST00000496116 CCDC152Q4G0S7 254 aa12.98□□□□□ -0.33
CMSS1-208ENST00000496116 PGBD1Q96JS3 809 aa12.98□□□□□ -0.33
CMSS1-208ENST00000496116 KLF18A0A0U1RQI7 1052 aa12.97□□□□□ -0.33
CMSS1-208ENST00000496116 GOLGA8BA8MQT2 603 aa12.97□□□□□ -0.33
CMSS1-208ENST00000496116 CPLX1O14810 134 aa12.97□□□□□ -0.33
CMSS1-208ENST00000496116 OFD1O75665 1012 aa12.97□□□□□ -0.33
CMSS1-208ENST00000496116 APPP05067 770 aa12.97□□□□□ -0.33
CMSS1-208ENST00000496116 TYRO3Q06418 890 aa12.97□□□□□ -0.33
CMSS1-208ENST00000496116 RBM43Q6ZSC3 357 aaKnown RBP12.97□□□□□ -0.33
CMSS1-208ENST00000496116 AIDAQ96BJ3 306 aa12.97□□□□□ -0.33
CMSS1-208ENST00000496116 ACSBG1Q96GR2 724 aa12.97□□□□□ -0.33
CMSS1-208ENST00000496116 PIH1D3Q9NQM4 214 aaKnown RBP12.97□□□□□ -0.33
CMSS1-208ENST00000496116 NR1I2O75469 434 aa12.97□□□□□ -0.33
CMSS1-208ENST00000496116 PDE6AP16499 860 aa12.97□□□□□ -0.33
CMSS1-208ENST00000496116 IGHMBP2P38935 993 aaKnown RBP12.97□□□□□ -0.33
CMSS1-208ENST00000496116 FOSBP53539 338 aa12.97□□□□□ -0.33
CMSS1-208ENST00000496116 MAP3K12Q12852 859 aa12.97□□□□□ -0.33
CMSS1-208ENST00000496116 SPATA5Q8NB90 893 aa12.97□□□□□ -0.33
CMSS1-208ENST00000496116 RCOR1Q9UKL0 485 aa12.97□□□□□ -0.33
CMSS1-208ENST00000496116 CICQ96RK0 1608 aaPredicted RBP12.97□□□□□ -0.33
CMSS1-208ENST00000496116 DDX60Q8IY21 1712 aaKnown RBP12.96□□□□□ -0.33
CMSS1-208ENST00000496116 SLIT2O94813 1529 aa12.96□□□□□ -0.33
CMSS1-208ENST00000496116 RREB1Q92766 1687 aa12.96□□□□□ -0.33
CMSS1-208ENST00000496116 CAMTA2O94983 1202 aa12.96□□□□□ -0.33
CMSS1-208ENST00000496116 ADD1P35611 737 aaKnown RBP12.96□□□□□ -0.33
CMSS1-208ENST00000496116 PLCB2Q00722 1185 aa12.96□□□□□ -0.33
CMSS1-208ENST00000496116 CEBPZQ03701 1054 aaKnown RBP12.96□□□□□ -0.33
CMSS1-208ENST00000496116 SASS6Q6UVJ0 657 aa12.96□□□□□ -0.33
CMSS1-208ENST00000496116 HELBQ8NG08 1087 aaPredicted RBP12.96□□□□□ -0.33
CMSS1-208ENST00000496116 PHLPP1O60346 1717 aa12.96□□□□□ -0.34
CMSS1-208ENST00000496116 MYO5AQ9Y4I1 1855 aaKnown RBP12.96□□□□□ -0.34
CMSS1-208ENST00000496116 ZMYM6O95789 1325 aa12.96□□□□□ -0.34
CMSS1-208ENST00000496116 FAM177BA6PVY3 158 aa12.95□□□□□ -0.34
CMSS1-208ENST00000496116 CTAGE5O15320 804 aa12.95□□□□□ -0.34
CMSS1-208ENST00000496116 CAVIN2O95810 425 aa12.95□□□□□ -0.34
CMSS1-208ENST00000496116 FDPSP14324 419 aaKnown RBP12.95□□□□□ -0.34
CMSS1-208ENST00000496116 ANTXR2P58335 489 aa12.95□□□□□ -0.34
CMSS1-208ENST00000496116 CKAP2LQ8IYA6 745 aa12.95□□□□□ -0.34
CMSS1-208ENST00000496116 MARCH10Q8NA82 808 aaPredicted RBP12.95□□□□□ -0.34
CMSS1-208ENST00000496116 RGS22Q8NE09 1264 aa12.95□□□□□ -0.34
CMSS1-208ENST00000496116 SMARCC1Q92922 1105 aaPredicted RBP12.95□□□□□ -0.34
CMSS1-208ENST00000496116 C8orf76Q96K31 380 aa12.95□□□□□ -0.34
CMSS1-208ENST00000496116 ANGEL1Q9UNK9 670 aaKnown RBP12.95□□□□□ -0.34
CMSS1-208ENST00000496116 NIP7Q9Y221 180 aaKnown RBP eCLIP12.95□□□□□ -0.34
CMSS1-208ENST00000496116 ZNF652Q9Y2D9 606 aa12.95□□□□□ -0.34
CMSS1-208ENST00000496116 MRVI1Q9Y6F6 885 aa12.95□□□□□ -0.34
CMSS1-208ENST00000496116 RTL9Q8NET4 1388 aa12.95□□□□□ -0.34
CMSS1-208ENST00000496116 KIAA2012Q0VF49 1180 aa12.95□□□□□ -0.34
CMSS1-208ENST00000496116 BARGINQ6ZT62 677 aa12.95□□□□□ -0.34
CMSS1-208ENST00000496116 GPHNQ9NQX3 736 aaPredicted RBP12.95□□□□□ -0.34
CMSS1-208ENST00000496116 WWC3Q9ULE0 1092 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms