RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 ANP32EQ9BTT0 268 aa11.17□□□□□ -0.62
GAPVD1-219ENST00000495955 BACH2Q9BYV9 841 aa11.17□□□□□ -0.62
GAPVD1-219ENST00000495955 ARMT1Q9H993 441 aa11.17□□□□□ -0.62
GAPVD1-219ENST00000495955 MCM2P49736 904 aa11.16□□□□□ -0.62
GAPVD1-219ENST00000495955 CSPP1Q1MSJ5 1256 aa11.16□□□□□ -0.62
GAPVD1-219ENST00000495955 UPF3BQ9BZI7 483 aaKnown RBP11.16□□□□□ -0.62
GAPVD1-219ENST00000495955 ATP6V1DQ9Y5K8 247 aa11.16□□□□□ -0.62
GAPVD1-219ENST00000495955 TEKT1Q969V4 418 aa11.16□□□□□ -0.62
GAPVD1-219ENST00000495955 PLEKHG2Q9H7P9 1386 aa11.16□□□□□ -0.62
GAPVD1-219ENST00000495955 IBTKQ9P2D0 1353 aaPredicted RBP11.16□□□□□ -0.62
GAPVD1-219ENST00000495955 ATRNO75882 1429 aa11.16□□□□□ -0.62
GAPVD1-219ENST00000495955 TCP10Q12799 353 aa11.16□□□□□ -0.62
GAPVD1-219ENST00000495955 LRRC4BQ9NT99 713 aa11.16□□□□□ -0.62
GAPVD1-219ENST00000495955 HMGB1P09429 215 aaKnown RBP11.15□□□□□ -0.62
GAPVD1-219ENST00000495955 ZNF827Q17R98 1081 aa11.15□□□□□ -0.62
GAPVD1-219ENST00000495955 MINPP1Q9UNW1 487 aa11.15□□□□□ -0.62
GAPVD1-219ENST00000495955 NTSR2O95665 410 aa11.15□□□□□ -0.62
GAPVD1-219ENST00000495955 PRKG1Q13976 671 aa11.15□□□□□ -0.62
GAPVD1-219ENST00000495955 ESYT1Q9BSJ8 1104 aa11.15□□□□□ -0.62
GAPVD1-219ENST00000495955 STX8Q9UNK0 236 aa11.15□□□□□ -0.62
GAPVD1-219ENST00000495955 ATP10DQ9P241 1426 aa11.15□□□□□ -0.62
GAPVD1-219ENST00000495955 ATP5JP18859 108 aa11.15□□□□□ -0.62
GAPVD1-219ENST00000495955 NCOA7Q8NI08 942 aa11.15□□□□□ -0.62
GAPVD1-219ENST00000495955 ZNF277Q9NRM2 450 aaPredicted RBP11.15□□□□□ -0.62
GAPVD1-219ENST00000495955 SLC12A7Q9Y666 1083 aa11.15□□□□□ -0.62
GAPVD1-219ENST00000495955 DPEP1P16444 411 aa11.15□□□□□ -0.63
GAPVD1-219ENST00000495955 EDC3Q96F86 508 aaKnown RBP11.15□□□□□ -0.63
GAPVD1-219ENST00000495955 CCDC34Q96HJ3 373 aa11.15□□□□□ -0.63
GAPVD1-219ENST00000495955 ZNF532Q9HCE3 1301 aa11.14□□□□□ -0.63
GAPVD1-219ENST00000495955 WDR78Q5VTH9 848 aa11.14□□□□□ -0.63
GAPVD1-219ENST00000495955 CCDC129Q6ZRS4 1044 aa11.14□□□□□ -0.63
GAPVD1-219ENST00000495955 SLC4A9Q96Q91 983 aa11.14□□□□□ -0.63
GAPVD1-219ENST00000495955 AOC3Q16853 763 aa11.14□□□□□ -0.63
GAPVD1-219ENST00000495955 TMEM67Q5HYA8 995 aa11.14□□□□□ -0.63
GAPVD1-219ENST00000495955 TTC6Q86TZ1 520 aa11.14□□□□□ -0.63
GAPVD1-219ENST00000495955 CTCFLQ8NI51 663 aaPredicted RBP11.14□□□□□ -0.63
GAPVD1-219ENST00000495955 KAT14Q9H8E8 782 aa11.14□□□□□ -0.63
GAPVD1-219ENST00000495955 HELLSQ9NRZ9 838 aa11.14□□□□□ -0.63
GAPVD1-219ENST00000495955 USP40Q9NVE5 1235 aa11.14□□□□□ -0.63
GAPVD1-219ENST00000495955 PEAK1Q9H792 1746 aa11.14□□□□□ -0.63
GAPVD1-219ENST00000495955 FOXO4P98177 505 aa11.14□□□□□ -0.63
GAPVD1-219ENST00000495955 KBTBD3Q8NAB2 608 aa11.14□□□□□ -0.63
GAPVD1-219ENST00000495955 TLR7Q9NYK1 1049 aaKnown RBP11.14□□□□□ -0.63
GAPVD1-219ENST00000495955 RBM8AQ9Y5S9 174 aaKnown RBP11.14□□□□□ -0.63
GAPVD1-219ENST00000495955 CCDC171Q6TFL3 1326 aa11.14□□□□□ -0.63
GAPVD1-219ENST00000495955 CDKL5O76039 1030 aa11.14□□□□□ -0.63
GAPVD1-219ENST00000495955 ATP2B1P20020 1258 aa11.14□□□□□ -0.63
GAPVD1-219ENST00000495955 CATIPQ7Z7H3 387 aa11.14□□□□□ -0.63
GAPVD1-219ENST00000495955 RNF181Q9P0P0 153 aa11.14□□□□□ -0.63
GAPVD1-219ENST00000495955 GPSM2P81274 684 aa11.13□□□□□ -0.63
GAPVD1-219ENST00000495955 APPBP2Q92624 585 aa11.13□□□□□ -0.63
GAPVD1-219ENST00000495955 PLCB2Q00722 1185 aa11.13□□□□□ -0.63
GAPVD1-219ENST00000495955 ESR2Q92731 530 aa11.13□□□□□ -0.63
GAPVD1-219ENST00000495955 KRT23Q9C075 422 aa11.13□□□□□ -0.63
GAPVD1-219ENST00000495955 SEC63Q9UGP8 760 aaKnown RBP11.13□□□□□ -0.63
GAPVD1-219ENST00000495955 DBNLQ9UJU6 430 aaKnown RBP11.13□□□□□ -0.63
GAPVD1-219ENST00000495955 CCDC82Q8N4S0 544 aa11.13□□□□□ -0.63
GAPVD1-219ENST00000495955 NEK1Q96PY6 1258 aa11.13□□□□□ -0.63
GAPVD1-219ENST00000495955 GPR108Q9NPR9 543 aa11.13□□□□□ -0.63
GAPVD1-219ENST00000495955 HMG20BQ9P0W2 317 aa11.13□□□□□ -0.63
GAPVD1-219ENST00000495955 AOX1Q06278 1338 aa11.13□□□□□ -0.63
GAPVD1-219ENST00000495955 UBN2Q6ZU65 1347 aa11.13□□□□□ -0.63
GAPVD1-219ENST00000495955 CIAPIN1Q6FI81 312 aa11.13□□□□□ -0.63
GAPVD1-219ENST00000495955 MAPKAPK5Q8IW41 473 aa11.13□□□□□ -0.63
GAPVD1-219ENST00000495955 SP8Q8IXZ3 490 aa11.13□□□□□ -0.63
GAPVD1-219ENST00000495955 TGFBRAP1Q8WUH2 860 aa11.13□□□□□ -0.63
GAPVD1-219ENST00000495955 ANO8Q9HCE9 1232 aaPredicted RBP11.13□□□□□ -0.63
GAPVD1-219ENST00000495955 SNAP23O00161 211 aa11.12□□□□□ -0.63
GAPVD1-219ENST00000495955 CRAMP1Q96RY5 1269 aa11.12□□□□□ -0.63
GAPVD1-219ENST00000495955 CHMLP26374 656 aa11.12□□□□□ -0.63
GAPVD1-219ENST00000495955 COA1Q9GZY4 146 aa11.12□□□□□ -0.63
GAPVD1-219ENST00000495955 STRCP1A6NGW2 1772 aa11.12□□□□□ -0.63
GAPVD1-219ENST00000495955 TCP10L2B9ZVM9 353 aa11.12□□□□□ -0.63
GAPVD1-219ENST00000495955 GPAA1O43292 621 aa11.12□□□□□ -0.63
GAPVD1-219ENST00000495955 POLA2Q14181 598 aa11.12□□□□□ -0.63
GAPVD1-219ENST00000495955 GRIPAP1Q4V328 841 aa11.12□□□□□ -0.63
GAPVD1-219ENST00000495955 DCPSQ96C86 337 aaKnown RBP11.12□□□□□ -0.63
GAPVD1-219ENST00000495955 CNNM2Q9H8M5 875 aa11.12□□□□□ -0.63
GAPVD1-219ENST00000495955 LRP6O75581 1613 aa11.12□□□□□ -0.63
GAPVD1-219ENST00000495955 USP17L3A6NCW0 530 aa11.12□□□□□ -0.63
GAPVD1-219ENST00000495955 USP17L4A6NCW7 530 aa11.12□□□□□ -0.63
GAPVD1-219ENST00000495955 USP17L1Q7RTZ2 530 aa11.12□□□□□ -0.63
GAPVD1-219ENST00000495955 CERS3Q8IU89 383 aa11.12□□□□□ -0.63
GAPVD1-219ENST00000495955 CCDC144CPQ8IYA2 1237 aa11.12□□□□□ -0.63
GAPVD1-219ENST00000495955 SEMA3EO15041 775 aa11.11□□□□□ -0.63
GAPVD1-219ENST00000495955 ZSCAN31Q96LW9 406 aaPredicted RBP11.11□□□□□ -0.63
GAPVD1-219ENST00000495955 FAM227BQ96M60 508 aa11.11□□□□□ -0.63
GAPVD1-219ENST00000495955 ABCC6O95255 1503 aa11.11□□□□□ -0.63
GAPVD1-219ENST00000495955 MCM5P33992 734 aa11.11□□□□□ -0.63
GAPVD1-219ENST00000495955 SF3B3Q15393 1217 aaKnown RBP11.11□□□□□ -0.63
GAPVD1-219ENST00000495955 LARP6Q9BRS8 491 aaKnown RBP11.11□□□□□ -0.63
GAPVD1-219ENST00000495955 GOLGA8BA8MQT2 603 aa11.11□□□□□ -0.63
GAPVD1-219ENST00000495955 ECE2O60344 883 aa11.11□□□□□ -0.63
GAPVD1-219ENST00000495955 CCDC43Q96MW1 224 aaKnown RBP11.11□□□□□ -0.63
GAPVD1-219ENST00000495955 VAT1LQ9HCJ6 419 aa11.11□□□□□ -0.63
GAPVD1-219ENST00000495955 GOLGA8AA7E2F4 631 aa11.11□□□□□ -0.63
GAPVD1-219ENST00000495955 SASH1O94885 1247 aa11.11□□□□□ -0.63
GAPVD1-219ENST00000495955 BTDP43251 543 aa11.11□□□□□ -0.63
GAPVD1-219ENST00000495955 RAB3GAP1Q15042 981 aa11.11□□□□□ -0.63
GAPVD1-219ENST00000495955 RAB11FIP4Q86YS3 637 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms