RNA–Protein interactions for RNA: ENST00000494195.1

HMGB3P14-201, Transcript of high mobility group box 3 pseudogene 14, humanhuman

BASIC

Gene HMGB3P14, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P14-201ENST00000494195 ITPKAP23677 461 aa12.57□□□□□ -0.4
HMGB3P14-201ENST00000494195 PIP4K2BP78356 416 aa12.57□□□□□ -0.4
HMGB3P14-201ENST00000494195 GRIK4Q16099 956 aa12.57□□□□□ -0.4
HMGB3P14-201ENST00000494195 WNT8BQ93098 351 aa12.57□□□□□ -0.4
HMGB3P14-201ENST00000494195 SPG7Q9UQ90 795 aa12.57□□□□□ -0.4
HMGB3P14-201ENST00000494195 DLL1O00548 723 aa12.56□□□□□ -0.4
HMGB3P14-201ENST00000494195 GIPC1O14908 333 aa12.56□□□□□ -0.4
HMGB3P14-201ENST00000494195 APBA3O96018 575 aa12.56□□□□□ -0.4
HMGB3P14-201ENST00000494195 PTPN12Q05209 780 aaKnown RBP12.56□□□□□ -0.4
HMGB3P14-201ENST00000494195 IKBKEQ14164 716 aa12.56□□□□□ -0.4
HMGB3P14-201ENST00000494195 NACC1Q96RE7 527 aa12.56□□□□□ -0.4
HMGB3P14-201ENST00000494195 NXPE4Q6UWF7 544 aa12.55□□□□□ -0.4
HMGB3P14-201ENST00000494195 KLHL23Q8NBE8 558 aa12.55□□□□□ -0.4
HMGB3P14-201ENST00000494195 FRMD6Q96NE9 622 aa12.55□□□□□ -0.4
HMGB3P14-201ENST00000494195 CLEC4MQ9H2X3 399 aaPredicted RBP12.55□□□□□ -0.4
HMGB3P14-201ENST00000494195 OSGEPQ9NPF4 335 aa12.55□□□□□ -0.4
HMGB3P14-201ENST00000494195 SEC31BQ9NQW1 1179 aa12.55□□□□□ -0.4
HMGB3P14-201ENST00000494195 GALNT11Q8NCW6 608 aa12.54□□□□□ -0.4
HMGB3P14-201ENST00000494195 DUSP9Q99956 384 aaKnown RBP12.54□□□□□ -0.4
HMGB3P14-201ENST00000494195 CARD10Q9BWT7 1032 aa12.54□□□□□ -0.4
HMGB3P14-201ENST00000494195 SRCIN1Q9C0H9 1055 aa12.54□□□□□ -0.4
HMGB3P14-201ENST00000494195 ESRRAP11474 423 aaPredicted RBP12.53□□□□□ -0.4
HMGB3P14-201ENST00000494195 GNA15P30679 374 aa12.53□□□□□ -0.4
HMGB3P14-201ENST00000494195 ARL4DP49703 201 aa12.53□□□□□ -0.4
HMGB3P14-201ENST00000494195 PCDH1Q08174 1060 aa12.53□□□□□ -0.4
HMGB3P14-201ENST00000494195 SLC7A3Q8WY07 619 aa12.53□□□□□ -0.4
HMGB3P14-201ENST00000494195 ZNF576Q9H609 170 aa12.53□□□□□ -0.4
HMGB3P14-201ENST00000494195 SOX1O00570 391 aaPredicted RBP12.52□□□□□ -0.41
HMGB3P14-201ENST00000494195 TM4SF5O14894 197 aa12.52□□□□□ -0.41
HMGB3P14-201ENST00000494195 XRCC5P13010 732 aaKnown RBP12.52□□□□□ -0.41
HMGB3P14-201ENST00000494195 SELPP16109 830 aa12.52□□□□□ -0.41
HMGB3P14-201ENST00000494195 FCGRTP55899 365 aa12.52□□□□□ -0.41
HMGB3P14-201ENST00000494195 IGF2-ASQ6U949 168 aa12.52□□□□□ -0.41
HMGB3P14-201ENST00000494195 OSBPL7Q9BZF2 842 aa12.52□□□□□ -0.41
HMGB3P14-201ENST00000494195 ZFYVE1Q9HBF4 777 aa12.52□□□□□ -0.41
HMGB3P14-201ENST00000494195 C9orf172C9J069 976 aa12.51□□□□□ -0.41
HMGB3P14-201ENST00000494195 CD68P34810 354 aaPredicted RBP12.51□□□□□ -0.41
HMGB3P14-201ENST00000494195 C19orf57Q0VDD7 668 aa12.51□□□□□ -0.41
HMGB3P14-201ENST00000494195 SHISA2Q6UWI4 295 aa12.51□□□□□ -0.41
HMGB3P14-201ENST00000494195 DTHD1Q6ZMT9 781 aa12.51□□□□□ -0.41
HMGB3P14-201ENST00000494195 LENG1Q96BZ8 264 aaPredicted RBP12.51□□□□□ -0.41
HMGB3P14-201ENST00000494195 SOX17Q9H6I2 414 aaPredicted RBP12.51□□□□□ -0.41
HMGB3P14-201ENST00000494195 SUZ12Q15022 739 aaKnown RBP12.5□□□□□ -0.41
HMGB3P14-201ENST00000494195 RPS26P11Q5JNZ5 115 aaPredicted RBP12.5□□□□□ -0.41
HMGB3P14-201ENST00000494195 KLHDC7BQ96G42 594 aa12.5□□□□□ -0.41
HMGB3P14-201ENST00000494195 BCL2L13Q9BXK5 485 aa12.5□□□□□ -0.41
HMGB3P14-201ENST00000494195 C12orf49Q9H741 205 aa12.5□□□□□ -0.41
HMGB3P14-201ENST00000494195 CHRNA4P43681 627 aa12.49□□□□□ -0.41
HMGB3P14-201ENST00000494195 NRG1Q02297 640 aaPredicted RBP12.49□□□□□ -0.41
HMGB3P14-201ENST00000494195 ZNF423Q2M1K9 1284 aa12.49□□□□□ -0.41
HMGB3P14-201ENST00000494195 PLA2G4EQ3MJ16 856 aa12.49□□□□□ -0.41
HMGB3P14-201ENST00000494195 FOXD4L6Q3SYB3 417 aaPredicted RBP12.49□□□□□ -0.41
HMGB3P14-201ENST00000494195 HGSNATQ68CP4 663 aa12.49□□□□□ -0.41
HMGB3P14-201ENST00000494195 FOXD4L3Q6VB84 417 aaPredicted RBP12.49□□□□□ -0.41
HMGB3P14-201ENST00000494195 CD163Q86VB7 1156 aa12.49□□□□□ -0.41
HMGB3P14-201ENST00000494195 C1QTNF9BB2RNN3 333 aa12.48□□□□□ -0.41
HMGB3P14-201ENST00000494195 GSTT1P30711 240 aa12.48□□□□□ -0.41
HMGB3P14-201ENST00000494195 RNF19AQ9NV58 838 aa12.48□□□□□ -0.41
HMGB3P14-201ENST00000494195 FAM8A1Q9UBU6 413 aa12.48□□□□□ -0.41
HMGB3P14-201ENST00000494195 PARP2Q9UGN5 583 aa12.48□□□□□ -0.41
HMGB3P14-201ENST00000494195 USP21Q9UK80 565 aa12.48□□□□□ -0.41
HMGB3P14-201ENST00000494195 EIF4EBP3O60516 100 aaPredicted RBP12.47□□□□□ -0.41
HMGB3P14-201ENST00000494195 B3GALT4O96024 378 aa12.47□□□□□ -0.41
HMGB3P14-201ENST00000494195 TAGLNQ01995 201 aaKnown RBP12.47□□□□□ -0.41
HMGB3P14-201ENST00000494195 MRPL18Q9H0U6 180 aaKnown RBP12.47□□□□□ -0.41
HMGB3P14-201ENST00000494195 KCNK4Q9NYG8 393 aa12.47□□□□□ -0.41
HMGB3P14-201ENST00000494195 ITGB2P05107 769 aa12.46□□□□□ -0.41
HMGB3P14-201ENST00000494195 EIF4BP23588 611 aaKnown RBP12.46□□□□□ -0.41
HMGB3P14-201ENST00000494195 XPCQ01831 940 aaPredicted RBP12.46□□□□□ -0.41
HMGB3P14-201ENST00000494195 C3orf58Q8NDZ4 430 aa12.46□□□□□ -0.41
HMGB3P14-201ENST00000494195 AK5Q9Y6K8 562 aa12.46□□□□□ -0.41
HMGB3P14-201ENST00000494195 ADAM11O75078 769 aa12.45□□□□□ -0.42
HMGB3P14-201ENST00000494195 DAB2P98082 770 aa12.45□□□□□ -0.42
HMGB3P14-201ENST00000494195 GIPC2Q8TF65 315 aa12.45□□□□□ -0.42
HMGB3P14-201ENST00000494195 FOXD4L4Q8WXT5 416 aaPredicted RBP12.45□□□□□ -0.42
HMGB3P14-201ENST00000494195 AKAP2Q9Y2D5 859 aa12.45□□□□□ -0.42
HMGB3P14-201ENST00000494195 DDX3YO15523 660 aaKnown RBP12.44□□□□□ -0.42
HMGB3P14-201ENST00000494195 GSTM4Q03013 218 aa12.44□□□□□ -0.42
HMGB3P14-201ENST00000494195 PSMD2Q13200 908 aa12.44□□□□□ -0.42
HMGB3P14-201ENST00000494195 ADGRE1Q14246 886 aa12.44□□□□□ -0.42
HMGB3P14-201ENST00000494195 MBTPS1Q14703 1052 aa12.44□□□□□ -0.42
HMGB3P14-201ENST00000494195 DDX54Q8TDD1 881 aaKnown RBP12.44□□□□□ -0.42
HMGB3P14-201ENST00000494195 USP17L7P0C7H9 530 aa12.43□□□□□ -0.42
HMGB3P14-201ENST00000494195 NLRP12P59046 1061 aa12.43□□□□□ -0.42
HMGB3P14-201ENST00000494195 FAAP100Q0VG06 881 aa12.43□□□□□ -0.42
HMGB3P14-201ENST00000494195 ZNF326Q5BKZ1 582 aaKnown RBP12.43□□□□□ -0.42
HMGB3P14-201ENST00000494195 TMC4Q7Z404 712 aa12.43□□□□□ -0.42
HMGB3P14-201ENST00000494195 TMEM130Q8N3G9 435 aa12.43□□□□□ -0.42
HMGB3P14-201ENST00000494195 PPM1HQ9ULR3 514 aa12.43□□□□□ -0.42
HMGB3P14-201ENST00000494195 CCDC9Q9Y3X0 531 aaKnown RBP12.43□□□□□ -0.42
HMGB3P14-201ENST00000494195 DUOXA2Q1HG44 320 aa12.42□□□□□ -0.42
HMGB3P14-201ENST00000494195 WISP1O95388 367 aa12.41□□□□□ -0.42
HMGB3P14-201ENST00000494195 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.41□□□□□ -0.42
HMGB3P14-201ENST00000494195 UBASH3BQ8TF42 649 aa12.41□□□□□ -0.42
HMGB3P14-201ENST00000494195 F8W735 103 aaPredicted RBP12.4□□□□□ -0.42
HMGB3P14-201ENST00000494195 ACAD11Q709F0 780 aa12.4□□□□□ -0.42
HMGB3P14-201ENST00000494195 ANKRD24Q8TF21 1146 aa12.4□□□□□ -0.42
HMGB3P14-201ENST00000494195 FAM161BQ96MY7 647 aa12.4□□□□□ -0.42
HMGB3P14-201ENST00000494195 AKTIPQ9H8T0 292 aa12.4□□□□□ -0.42
HMGB3P14-201ENST00000494195 GPN3Q9UHW5 284 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms