RNA–Protein interactions for RNA: ENST00000493609.1

SMG7-208, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG7, Length 624 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-208ENST00000493609 FAM8A1Q9UBU6 413 aa9.83□□□□□ -0.84
SMG7-208ENST00000493609 CTSHP09668 335 aa9.82□□□□□ -0.84
SMG7-208ENST00000493609 LINC00114Q6XXX2 140 aa9.82□□□□□ -0.84
SMG7-208ENST00000493609 BACH2Q9BYV9 841 aa9.82□□□□□ -0.84
SMG7-208ENST00000493609 SRCIN1Q9C0H9 1055 aa9.82□□□□□ -0.84
SMG7-208ENST00000493609 MUC3BQ9H195 1237 aa9.82□□□□□ -0.84
SMG7-208ENST00000493609 E9PSI1 815 aa9.81□□□□□ -0.84
SMG7-208ENST00000493609 PTPRAP18433 802 aa9.81□□□□□ -0.84
SMG7-208ENST00000493609 TSNAXIP1Q2TAA8 658 aa9.81□□□□□ -0.84
SMG7-208ENST00000493609 DTHD1Q6ZMT9 781 aa9.81□□□□□ -0.84
SMG7-208ENST00000493609 IL22RA1Q8N6P7 574 aa9.81□□□□□ -0.84
SMG7-208ENST00000493609 BSNDQ8WZ55 320 aa9.81□□□□□ -0.84
SMG7-208ENST00000493609 AKAP2Q9Y2D5 859 aa9.81□□□□□ -0.84
SMG7-208ENST00000493609 CDC25BP30305 580 aa9.8□□□□□ -0.84
SMG7-208ENST00000493609 GSTT1P30711 240 aa9.8□□□□□ -0.84
SMG7-208ENST00000493609 COL9A3Q14050 684 aaPredicted RBP9.8□□□□□ -0.84
SMG7-208ENST00000493609 C3orf58Q8NDZ4 430 aa9.8□□□□□ -0.84
SMG7-208ENST00000493609 ADAM19Q9H013 955 aa9.8□□□□□ -0.84
SMG7-208ENST00000493609 RECKO95980 971 aa9.79□□□□□ -0.84
SMG7-208ENST00000493609 ITPKAP23677 461 aa9.79□□□□□ -0.84
SMG7-208ENST00000493609 VAMP1P23763 118 aa9.79□□□□□ -0.84
SMG7-208ENST00000493609 CDC27P30260 824 aa9.79□□□□□ -0.84
SMG7-208ENST00000493609 BAG6P46379 1132 aa9.79□□□□□ -0.84
SMG7-208ENST00000493609 DGKGP49619 791 aa9.79□□□□□ -0.84
SMG7-208ENST00000493609 LDLRAD1Q5T700 205 aa9.79□□□□□ -0.84
SMG7-208ENST00000493609 MEI1Q5TIA1 1274 aa9.79□□□□□ -0.84
SMG7-208ENST00000493609 SOX13Q9UN79 622 aa9.79□□□□□ -0.84
SMG7-208ENST00000493609 EPHA1P21709 976 aa9.78□□□□□ -0.84
SMG7-208ENST00000493609 VN1R5Q7Z5H4 357 aa9.78□□□□□ -0.84
SMG7-208ENST00000493609 PRDM6Q9NQX0 595 aa9.78□□□□□ -0.84
SMG7-208ENST00000493609 NID1P14543 1247 aa9.77□□□□□ -0.85
SMG7-208ENST00000493609 ITGAEP38570 1179 aa9.77□□□□□ -0.85
SMG7-208ENST00000493609 MSL1Q68DK7 614 aa9.77□□□□□ -0.85
SMG7-208ENST00000493609 TXNDC11Q6PKC3 985 aa9.77□□□□□ -0.85
SMG7-208ENST00000493609 TMEM87AQ8NBN3 555 aa9.77□□□□□ -0.85
SMG7-208ENST00000493609 CRELD1Q96HD1 420 aa9.77□□□□□ -0.85
SMG7-208ENST00000493609 ZNF576Q9H609 170 aa9.77□□□□□ -0.85
SMG7-208ENST00000493609 FAM177BA6PVY3 158 aa9.76□□□□□ -0.85
SMG7-208ENST00000493609 XRCC5P13010 732 aaKnown RBP9.76□□□□□ -0.85
SMG7-208ENST00000493609 WFDC8Q8IUA0 241 aa9.76□□□□□ -0.85
SMG7-208ENST00000493609 DMRTC2Q8IXT2 367 aaPredicted RBP9.76□□□□□ -0.85
SMG7-208ENST00000493609 PPME1Q9Y570 386 aa9.76□□□□□ -0.85
SMG7-208ENST00000493609 LINC01387J3KSC0 135 aa9.75□□□□□ -0.85
SMG7-208ENST00000493609 FBXO24O75426 580 aa9.75□□□□□ -0.85
SMG7-208ENST00000493609 PTPN12Q05209 780 aaKnown RBP9.75□□□□□ -0.85
SMG7-208ENST00000493609 FAAP100Q0VG06 881 aa9.75□□□□□ -0.85
SMG7-208ENST00000493609 ALYREFQ86V81 257 aaKnown RBP9.75□□□□□ -0.85
SMG7-208ENST00000493609 CACTIN-AS1Q8N1I8 211 aa9.75□□□□□ -0.85
SMG7-208ENST00000493609 CLEC4MQ9H2X3 399 aaPredicted RBP9.75□□□□□ -0.85
SMG7-208ENST00000493609 TTF2Q9UNY4 1162 aaKnown RBP9.75□□□□□ -0.85
SMG7-208ENST00000493609 ZNF157P51786 506 aaPredicted RBP9.74□□□□□ -0.85
SMG7-208ENST00000493609 PCDH1Q08174 1060 aa9.74□□□□□ -0.85
SMG7-208ENST00000493609 TAF1CQ15572 869 aaPredicted RBP9.74□□□□□ -0.85
SMG7-208ENST00000493609 ZNF423Q2M1K9 1284 aa9.74□□□□□ -0.85
SMG7-208ENST00000493609 HGSNATQ68CP4 663 aa9.74□□□□□ -0.85
SMG7-208ENST00000493609 TPTE2Q6XPS3 522 aa9.74□□□□□ -0.85
SMG7-208ENST00000493609 USP31Q70CQ4 1352 aa9.74□□□□□ -0.85
SMG7-208ENST00000493609 SOX1O00570 391 aaPredicted RBP9.73□□□□□ -0.85
SMG7-208ENST00000493609 GNB5O14775 395 aa9.73□□□□□ -0.85
SMG7-208ENST00000493609 ESRRAP11474 423 aaPredicted RBP9.73□□□□□ -0.85
SMG7-208ENST00000493609 CABP4P57796 275 aa9.73□□□□□ -0.85
SMG7-208ENST00000493609 IKBKEQ14164 716 aa9.73□□□□□ -0.85
SMG7-208ENST00000493609 TRIM11Q96F44 468 aa9.73□□□□□ -0.85
SMG7-208ENST00000493609 SEC31BQ9NQW1 1179 aa9.73□□□□□ -0.85
SMG7-208ENST00000493609 H3BRJ5 948 aa9.72□□□□□ -0.85
SMG7-208ENST00000493609 K7ELQ4 463 aaPredicted RBP9.72□□□□□ -0.85
SMG7-208ENST00000493609 TRAPPC3LQ5T215 181 aa9.72□□□□□ -0.85
SMG7-208ENST00000493609 ILDR2Q71H61 639 aa9.72□□□□□ -0.85
SMG7-208ENST00000493609 SLC7A3Q8WY07 619 aa9.72□□□□□ -0.85
SMG7-208ENST00000493609 ZFYVE1Q9HBF4 777 aa9.72□□□□□ -0.85
SMG7-208ENST00000493609 FURINP09958 794 aa9.71□□□□□ -0.86
SMG7-208ENST00000493609 RPS26P11Q5JNZ5 115 aaPredicted RBP9.71□□□□□ -0.86
SMG7-208ENST00000493609 CARD10Q9BWT7 1032 aa9.71□□□□□ -0.86
SMG7-208ENST00000493609 PLVAPQ9BX97 442 aa9.71□□□□□ -0.86
SMG7-208ENST00000493609 KRTAP4-8Q9BYQ9 185 aa9.71□□□□□ -0.86
SMG7-208ENST00000493609 PPM1HQ9ULR3 514 aa9.71□□□□□ -0.86
SMG7-208ENST00000493609 C1QTNF9BB2RNN3 333 aa9.7□□□□□ -0.86
SMG7-208ENST00000493609 GPN3Q9UHW5 284 aaPredicted RBP9.7□□□□□ -0.86
SMG7-208ENST00000493609 FSCN2O14926 492 aa9.69□□□□□ -0.86
SMG7-208ENST00000493609 B3GALT4O96024 378 aa9.69□□□□□ -0.86
SMG7-208ENST00000493609 ST13P50502 369 aaKnown RBP9.69□□□□□ -0.86
SMG7-208ENST00000493609 SETDB1Q15047 1291 aa9.69□□□□□ -0.86
SMG7-208ENST00000493609 FAM117BQ6P1L5 589 aa9.69□□□□□ -0.86
SMG7-208ENST00000493609 CD163Q86VB7 1156 aa9.69□□□□□ -0.86
SMG7-208ENST00000493609 PIK3R2O00459 728 aa9.68□□□□□ -0.86
SMG7-208ENST00000493609 SCAMP3O14828 347 aaKnown RBP9.68□□□□□ -0.86
SMG7-208ENST00000493609 DEAF1O75398 565 aaPredicted RBP9.68□□□□□ -0.86
SMG7-208ENST00000493609 CELA3AP09093 270 aa9.68□□□□□ -0.86
SMG7-208ENST00000493609 CCDC85BQ15834 202 aaPredicted RBP9.68□□□□□ -0.86
SMG7-208ENST00000493609 C9orf131Q5VYM1 1079 aa9.68□□□□□ -0.86
SMG7-208ENST00000493609 GALNT11Q8NCW6 608 aa9.68□□□□□ -0.86
SMG7-208ENST00000493609 NECAB3Q96P71 396 aaPredicted RBP9.68□□□□□ -0.86
SMG7-208ENST00000493609 TRIM56Q9BRZ2 755 aaKnown RBP9.68□□□□□ -0.86
SMG7-208ENST00000493609 TMEM39AQ9NV64 488 aa9.68□□□□□ -0.86
SMG7-208ENST00000493609 FAM229AH3BQW9 127 aa9.67□□□□□ -0.86
SMG7-208ENST00000493609 ENC1O14682 589 aa9.67□□□□□ -0.86
SMG7-208ENST00000493609 PAGE1O75459 146 aa9.67□□□□□ -0.86
SMG7-208ENST00000493609 CHRNA4P43681 627 aa9.67□□□□□ -0.86
SMG7-208ENST00000493609 PIP4K2BP78356 416 aa9.67□□□□□ -0.86
SMG7-208ENST00000493609 FANCCQ00597 558 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms