RNA–Protein interactions for RNA: ENST00000493521.5

SOX2-OT-215, SOX2 overlapping transcript, humanhuman

TSL 3 BASIC

Gene SOX2-OT, Length 1,239 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-215ENST00000493521 MPHOSPH8Q99549 860 aa12.92□□□□□ -0.34
SOX2-OT-215ENST00000493521 R3HDMLQ9H3Y0 253 aa12.92□□□□□ -0.34
SOX2-OT-215ENST00000493521 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.92□□□□□ -0.34
SOX2-OT-215ENST00000493521 LEMD3Q9Y2U8 911 aa12.92□□□□□ -0.34
SOX2-OT-215ENST00000493521 ANKRD18BA2A2Z9 1011 aa12.91□□□□□ -0.34
SOX2-OT-215ENST00000493521 NBPF7P0C2Y1 421 aaPredicted RBP12.91□□□□□ -0.34
SOX2-OT-215ENST00000493521 SLC4A10Q6U841 1118 aa12.91□□□□□ -0.34
SOX2-OT-215ENST00000493521 PITPNM2Q9BZ72 1349 aa12.9□□□□□ -0.34
SOX2-OT-215ENST00000493521 GRM8O00222 908 aa12.9□□□□□ -0.34
SOX2-OT-215ENST00000493521 PTPN12Q05209 780 aaKnown RBP12.9□□□□□ -0.34
SOX2-OT-215ENST00000493521 CDAN1Q8IWY9 1227 aa12.9□□□□□ -0.34
SOX2-OT-215ENST00000493521 AKAP11Q9UKA4 1901 aa12.9□□□□□ -0.35
SOX2-OT-215ENST00000493521 CLRN2A0PK11 232 aa12.89□□□□□ -0.35
SOX2-OT-215ENST00000493521 RRP1P56182 461 aaKnown RBP12.89□□□□□ -0.35
SOX2-OT-215ENST00000493521 IFIT5Q13325 482 aaKnown RBP12.89□□□□□ -0.35
SOX2-OT-215ENST00000493521 MRPL50Q8N5N7 158 aaKnown RBP12.89□□□□□ -0.35
SOX2-OT-215ENST00000493521 KLHDC4Q8TBB5 520 aa12.89□□□□□ -0.35
SOX2-OT-215ENST00000493521 ANKRD2Q9GZV1 360 aa12.89□□□□□ -0.35
SOX2-OT-215ENST00000493521 TBC1D8O95759 1140 aa12.88□□□□□ -0.35
SOX2-OT-215ENST00000493521 GYG1P46976 350 aa12.88□□□□□ -0.35
SOX2-OT-215ENST00000493521 KCNJ4P48050 445 aa12.88□□□□□ -0.35
SOX2-OT-215ENST00000493521 LRRC24Q50LG9 513 aa12.88□□□□□ -0.35
SOX2-OT-215ENST00000493521 ANKRD44Q8N8A2 993 aa12.88□□□□□ -0.35
SOX2-OT-215ENST00000493521 CCDC102AQ96A19 550 aa12.88□□□□□ -0.35
SOX2-OT-215ENST00000493521 CLMNQ96JQ2 1002 aa12.88□□□□□ -0.35
SOX2-OT-215ENST00000493521 PRMT6Q96LA8 375 aaPredicted RBP12.88□□□□□ -0.35
SOX2-OT-215ENST00000493521 HTTP42858 3142 aa12.88□□□□□ -0.35
SOX2-OT-215ENST00000493521 IL1R1P14778 569 aa12.87□□□□□ -0.35
SOX2-OT-215ENST00000493521 TTLL12Q14166 644 aaPredicted RBP12.87□□□□□ -0.35
SOX2-OT-215ENST00000493521 C15orf52Q6ZUT6 534 aaKnown RBP12.87□□□□□ -0.35
SOX2-OT-215ENST00000493521 CHMP4AQ9BY43 222 aa12.87□□□□□ -0.35
SOX2-OT-215ENST00000493521 BICC1Q9H694 974 aaKnown RBP12.87□□□□□ -0.35
SOX2-OT-215ENST00000493521 IQSEC3Q9UPP2 1182 aaPredicted RBP12.87□□□□□ -0.35
SOX2-OT-215ENST00000493521 ECM29Q5VYK3 1845 aa12.86□□□□□ -0.35
SOX2-OT-215ENST00000493521 CA12O43570 354 aa12.86□□□□□ -0.35
SOX2-OT-215ENST00000493521 CFAP100Q494V2 611 aa12.86□□□□□ -0.35
SOX2-OT-215ENST00000493521 LDHAL6AQ6ZMR3 332 aa12.86□□□□□ -0.35
SOX2-OT-215ENST00000493521 SSH1Q8WYL5 1049 aa12.86□□□□□ -0.35
SOX2-OT-215ENST00000493521 MYO3BQ8WXR4 1341 aa12.86□□□□□ -0.35
SOX2-OT-215ENST00000493521 GJA5P36382 358 aa12.85□□□□□ -0.35
SOX2-OT-215ENST00000493521 SOX10P56693 466 aa12.85□□□□□ -0.35
SOX2-OT-215ENST00000493521 CAP1Q01518 475 aa12.85□□□□□ -0.35
SOX2-OT-215ENST00000493521 NBPF12Q5TAG4 269 aaPredicted RBP12.85□□□□□ -0.35
SOX2-OT-215ENST00000493521 OGFOD1Q8N543 542 aa12.85□□□□□ -0.35
SOX2-OT-215ENST00000493521 FAM84BQ96KN1 310 aaPredicted RBP12.85□□□□□ -0.35
SOX2-OT-215ENST00000493521 SRCIN1Q9C0H9 1055 aa12.85□□□□□ -0.35
SOX2-OT-215ENST00000493521 CNNM1Q9NRU3 951 aa12.85□□□□□ -0.35
SOX2-OT-215ENST00000493521 C9orf78Q9NZ63 289 aaPredicted RBP12.85□□□□□ -0.35
SOX2-OT-215ENST00000493521 ANGEL1Q9UNK9 670 aaKnown RBP12.85□□□□□ -0.35
SOX2-OT-215ENST00000493521 RIPOR2Q9Y4F9 1068 aa12.85□□□□□ -0.35
SOX2-OT-215ENST00000493521 OTOFQ9HC10 1997 aa12.85□□□□□ -0.35
SOX2-OT-215ENST00000493521 CENPFP49454 3210 aa12.84□□□□□ -0.35
SOX2-OT-215ENST00000493521 SPDYE2BA6NHP3 402 aa12.84□□□□□ -0.35
SOX2-OT-215ENST00000493521 ALDH1L1O75891 902 aa12.84□□□□□ -0.35
SOX2-OT-215ENST00000493521 SPDYE6P0CI01 402 aa12.84□□□□□ -0.35
SOX2-OT-215ENST00000493521 CCDC57Q2TAC2 916 aa12.84□□□□□ -0.35
SOX2-OT-215ENST00000493521 LDLRAD1Q5T700 205 aa12.84□□□□□ -0.35
SOX2-OT-215ENST00000493521 DEFB129Q9H1M3 183 aa12.84□□□□□ -0.35
SOX2-OT-215ENST00000493521 SAGE1Q9NXZ1 904 aa12.84□□□□□ -0.35
SOX2-OT-215ENST00000493521 UTYO14607 1347 aa12.84□□□□□ -0.35
SOX2-OT-215ENST00000493521 ARAP2Q8WZ64 1704 aa12.83□□□□□ -0.36
SOX2-OT-215ENST00000493521 BCAR3O75815 825 aa12.83□□□□□ -0.36
SOX2-OT-215ENST00000493521 CT47B1P0C2W7 299 aaPredicted RBP12.83□□□□□ -0.36
SOX2-OT-215ENST00000493521 RGS19P49795 217 aa12.83□□□□□ -0.36
SOX2-OT-215ENST00000493521 FKBP1BP68106 108 aa12.83□□□□□ -0.36
SOX2-OT-215ENST00000493521 DLGAP5Q15398 846 aa12.83□□□□□ -0.36
SOX2-OT-215ENST00000493521 TAF7LQ5H9L4 462 aa12.83□□□□□ -0.36
SOX2-OT-215ENST00000493521 ERICH6BQ5W0A0 696 aa12.83□□□□□ -0.36
SOX2-OT-215ENST00000493521 TDRD7Q8NHU6 1098 aaKnown RBP12.83□□□□□ -0.36
SOX2-OT-215ENST00000493521 ZNF296Q8WUU4 475 aaPredicted RBP12.83□□□□□ -0.36
SOX2-OT-215ENST00000493521 CNKSR2Q8WXI2 1034 aa12.83□□□□□ -0.36
SOX2-OT-215ENST00000493521 VEZTQ9HBM0 779 aa12.83□□□□□ -0.36
SOX2-OT-215ENST00000493521 RARSP54136 660 aaKnown RBP12.82□□□□□ -0.36
SOX2-OT-215ENST00000493521 CACNB3P54284 484 aa12.82□□□□□ -0.36
SOX2-OT-215ENST00000493521 RABL6Q3YEC7 729 aaPredicted RBP12.82□□□□□ -0.36
SOX2-OT-215ENST00000493521 ZNF804AQ7Z570 1209 aa12.82□□□□□ -0.36
SOX2-OT-215ENST00000493521 VGLL2Q8N8G2 317 aa12.82□□□□□ -0.36
SOX2-OT-215ENST00000493521 MTMR14Q8NCE2 650 aa12.82□□□□□ -0.36
SOX2-OT-215ENST00000493521 USP44Q9H0E7 712 aa12.82□□□□□ -0.36
SOX2-OT-215ENST00000493521 TDRD3Q9H7E2 651 aaKnown RBP12.82□□□□□ -0.36
SOX2-OT-215ENST00000493521 HDAC9Q9UKV0 1011 aa12.82□□□□□ -0.36
SOX2-OT-215ENST00000493521 MKI67P46013 3256 aaKnown RBP12.81□□□□□ -0.36
SOX2-OT-215ENST00000493521 COL1A1P02452 1464 aaPredicted RBP12.81□□□□□ -0.36
SOX2-OT-215ENST00000493521 IGF2BP3O00425 579 aaKnown RBP eCLIP12.81□□□□□ -0.36
SOX2-OT-215ENST00000493521 USP2O75604 605 aaPredicted RBP12.81□□□□□ -0.36
SOX2-OT-215ENST00000493521 TM4SF4P48230 202 aa12.81□□□□□ -0.36
SOX2-OT-215ENST00000493521 RFX5P48382 616 aaPredicted RBP12.81□□□□□ -0.36
SOX2-OT-215ENST00000493521 BCAMP50895 628 aa12.81□□□□□ -0.36
SOX2-OT-215ENST00000493521 RBM5P52756 815 aaKnown RBP eCLIP12.81□□□□□ -0.36
SOX2-OT-215ENST00000493521 CHAF1AQ13111 956 aaPredicted RBP12.81□□□□□ -0.36
SOX2-OT-215ENST00000493521 RASA3Q14644 834 aa12.81□□□□□ -0.36
SOX2-OT-215ENST00000493521 MFSD14BQ5SR56 506 aa12.81□□□□□ -0.36
SOX2-OT-215ENST00000493521 SPRYD7Q5W111 196 aa12.81□□□□□ -0.36
SOX2-OT-215ENST00000493521 APOBEC3FQ8IUX4 373 aaKnown RBP12.81□□□□□ -0.36
SOX2-OT-215ENST00000493521 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.81□□□□□ -0.36
SOX2-OT-215ENST00000493521 FAM205AQ6ZU69 1335 aa12.81□□□□□ -0.36
SOX2-OT-215ENST00000493521 BRCA2P51587 3418 aa12.81□□□□□ -0.36
SOX2-OT-215ENST00000493521 HIBADHP31937 336 aaKnown RBP12.8□□□□□ -0.36
SOX2-OT-215ENST00000493521 UBE4AQ14139 1066 aa12.8□□□□□ -0.36
SOX2-OT-215ENST00000493521 FBXO33Q7Z6M2 555 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms