RNA–Protein interactions for RNA: ENST00000492556.5

CHKB-CPT1B-203, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 2

Gene CHKB-CPT1B, Length 4,906 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-203ENST00000492556 ARHGAP6O43182 974 aa24.05■■□□□ 1.44
CHKB-CPT1B-203ENST00000492556 UQCRFS1P1P0C7P4 283 aa24.05■■□□□ 1.44
CHKB-CPT1B-203ENST00000492556 RNF187Q5TA31 235 aaPredicted RBP24.05■■□□□ 1.44
CHKB-CPT1B-203ENST00000492556 TRMT112Q9UI30 125 aaKnown RBP24.05■■□□□ 1.44
CHKB-CPT1B-203ENST00000492556 RHOXF2BP0C7M4 288 aa24.05■■□□□ 1.44
CHKB-CPT1B-203ENST00000492556 DHX58Q96C10 678 aa24.05■■□□□ 1.44
CHKB-CPT1B-203ENST00000492556 TSG101Q99816 390 aa24.05■■□□□ 1.44
CHKB-CPT1B-203ENST00000492556 RHOXF2Q9BQY4 288 aa24.05■■□□□ 1.44
CHKB-CPT1B-203ENST00000492556 GTF2A1P52655 376 aaPredicted RBP24.05■■□□□ 1.44
CHKB-CPT1B-203ENST00000492556 C10orf67Q8IYJ2 551 aa24.05■■□□□ 1.44
CHKB-CPT1B-203ENST00000492556 SYCP1Q15431 976 aa24.04■■□□□ 1.44
CHKB-CPT1B-203ENST00000492556 ATP2B3Q16720 1220 aa24.04■■□□□ 1.44
CHKB-CPT1B-203ENST00000492556 SUCLG2Q96I99 432 aa24.04■■□□□ 1.44
CHKB-CPT1B-203ENST00000492556 LRRC59Q96AG4 307 aaKnown RBP24.04■■□□□ 1.44
CHKB-CPT1B-203ENST00000492556 TRIM47Q96LD4 638 aa24.04■■□□□ 1.44
CHKB-CPT1B-203ENST00000492556 NRBP1Q9UHY1 535 aa24.04■■□□□ 1.44
CHKB-CPT1B-203ENST00000492556 CDC25BP30305 580 aa24.04■■□□□ 1.44
CHKB-CPT1B-203ENST00000492556 TDRD12Q587J7 1177 aaKnown RBP24.04■■□□□ 1.44
CHKB-CPT1B-203ENST00000492556 TRIM21P19474 475 aaKnown RBP24.03■■□□□ 1.44
CHKB-CPT1B-203ENST00000492556 DBNDD2Q9BQY9 259 aa24.03■■□□□ 1.44
CHKB-CPT1B-203ENST00000492556 TMOD3Q9NYL9 352 aa24.03■■□□□ 1.44
CHKB-CPT1B-203ENST00000492556 TRIM75PA6NK02 468 aa24.03■■□□□ 1.44
CHKB-CPT1B-203ENST00000492556 SLC9C2Q5TAH2 1124 aa24.03■■□□□ 1.44
CHKB-CPT1B-203ENST00000492556 CNGA4Q8IV77 575 aa24.03■■□□□ 1.44
CHKB-CPT1B-203ENST00000492556 KLHDC4Q8TBB5 520 aa24.03■■□□□ 1.44
CHKB-CPT1B-203ENST00000492556 UBA7P41226 1012 aa24.03■■□□□ 1.44
CHKB-CPT1B-203ENST00000492556 CFAP65Q6ZU64 1925 aaKnown RBP24.03■■□□□ 1.44
CHKB-CPT1B-203ENST00000492556 ADCK5Q3MIX3 580 aa24.03■■□□□ 1.44
CHKB-CPT1B-203ENST00000492556 KIF1BO60333 1816 aa24.03■■□□□ 1.44
CHKB-CPT1B-203ENST00000492556 MATR3P43243 847 aaKnown RBP eCLIP24.02■■□□□ 1.44
CHKB-CPT1B-203ENST00000492556 ERCC6LQ2NKX8 1250 aa24.02■■□□□ 1.44
CHKB-CPT1B-203ENST00000492556 LRRIQ1Q96JM4 1722 aa24.02■■□□□ 1.44
CHKB-CPT1B-203ENST00000492556 HSF2BPO75031 334 aa24.02■■□□□ 1.44
CHKB-CPT1B-203ENST00000492556 PHACTR2O75167 634 aa24.02■■□□□ 1.44
CHKB-CPT1B-203ENST00000492556 ZDHHC9Q9Y397 364 aa24.02■■□□□ 1.44
CHKB-CPT1B-203ENST00000492556 STX17P56962 302 aa24.02■■□□□ 1.44
CHKB-CPT1B-203ENST00000492556 TUBB2AQ13885 445 aa24.02■■□□□ 1.44
CHKB-CPT1B-203ENST00000492556 TUBB2BQ9BVA1 445 aa24.02■■□□□ 1.44
CHKB-CPT1B-203ENST00000492556 DNA2P51530 1060 aa24.02■■□□□ 1.44
CHKB-CPT1B-203ENST00000492556 ADALQ6DHV7 355 aa24.01■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 KBTBD3Q8NAB2 608 aa24.01■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 CHMP4BP1P59074 171 aa24.01■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 OTUD7BQ6GQQ9 843 aa24.01■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 IP6K1Q92551 441 aa24.01■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 KIAA1468Q9P260 1216 aa24.01■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 A0A0D9SFI3 127 aa24.01■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 KRT83P78385 493 aa24.01■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 KCNH3Q9ULD8 1083 aa24.01■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 CEBPAP49715 358 aaPredicted RBP24.01■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 TAX1BP1Q86VP1 789 aa24.01■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 EIF4A1P60842 406 aaKnown RBP24■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 TCP11L1Q9NUJ3 509 aa24■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 MADDQ8WXG6 1647 aa24■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 MAP3K4Q9Y6R4 1608 aa24■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 MNAT1P51948 309 aa24■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 CYP2E1P05181 493 aaPredicted RBP24■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 KRT86O43790 486 aa24■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 AMPD3Q01432 767 aa24■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 USP28Q96RU2 1077 aa24■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 GPTP24298 496 aa23.99■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 MAP4K1Q92918 833 aa23.99■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 AKR1B10O60218 316 aa23.99■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 CAVIN4Q5BKX8 364 aa23.99■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 GUCA1BQ9UMX6 200 aa23.99■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 MYO1BO43795 1136 aa23.99■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 OPA1O60313 960 aa23.99■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 TTC31Q49AM3 519 aaPredicted RBP23.99■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 LGR6Q9HBX8 967 aa23.99■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 IKQ13123 557 aaPredicted RBP23.99■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 CCDC178Q5BJE1 867 aa23.99■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 CACTINQ8WUQ7 758 aaKnown RBP23.99■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 ATP5JP18859 108 aa23.98■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 OAS2P29728 719 aaKnown RBP23.98■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 HLTFQ14527 1009 aaKnown RBP eCLIP23.98■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 METTL22Q9BUU2 404 aaPredicted RBP23.98■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 ZFYVE27Q5T4F4 411 aa23.98■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 ATP7BP35670 1465 aa23.98■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 CCDC96Q2M329 555 aa23.98■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 CUTAO60888 179 aa23.98■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 ETF1P62495 437 aaKnown RBP23.98■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 KRT28Q7Z3Y7 464 aa23.98■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 IGSF22Q8N9C0 903 aa23.98■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 RXRAP19793 462 aa23.97■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 KIF5BP33176 963 aa23.97■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 BEND3Q5T5X7 828 aa23.97■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 GPATCH11Q8N954 259 aa23.97■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 CPSF1Q10570 1443 aaKnown RBP23.97■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 TET3O43151 1660 aa23.97■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 MLKLQ8NB16 471 aa23.97■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 EAF2Q96CJ1 260 aaPredicted RBP23.97■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 RAB34Q9BZG1 259 aa23.97■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 SEC63Q9UGP8 760 aaKnown RBP23.97■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 PFKFB2O60825 505 aa23.97■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 WDHD1O75717 1129 aaPredicted RBP23.97■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 CLTCL1P53675 1640 aa23.97■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 EBAG9O00559 213 aa23.96■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 STAT6P42226 847 aa23.96■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 TIMM10P62072 90 aa23.96■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 IFFO1Q0D2I5 559 aa23.96■■□□□ 1.43
CHKB-CPT1B-203ENST00000492556 GPR161Q8N6U8 529 aaKnown RBP23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms