RNA–Protein interactions for RNA: ENST00000490692.1

PCSK9-202, Transcript of proprotein convertase subtilisin/kexin type 9, humanhuman

TSL 2

Gene PCSK9, Length 3,891 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9-202ENST00000490692 FAM204AQ9H8W3 233 aa13.17□□□□□ -0.3
PCSK9-202ENST00000490692 KIAA1468Q9P260 1216 aa13.17□□□□□ -0.3
PCSK9-202ENST00000490692 PTCH1Q13635 1447 aa13.17□□□□□ -0.3
PCSK9-202ENST00000490692 A0A0D9SFI3 127 aa13.17□□□□□ -0.3
PCSK9-202ENST00000490692 WASLO00401 505 aaPredicted RBP13.17□□□□□ -0.3
PCSK9-202ENST00000490692 ZNF202O95125 648 aa13.17□□□□□ -0.3
PCSK9-202ENST00000490692 CCDC102BQ68D86 513 aa13.17□□□□□ -0.3
PCSK9-202ENST00000490692 OTUD6BQ8N6M0 293 aa13.17□□□□□ -0.3
PCSK9-202ENST00000490692 TTC14Q96N46 770 aa13.17□□□□□ -0.3
PCSK9-202ENST00000490692 ARHGAP6O43182 974 aa13.16□□□□□ -0.3
PCSK9-202ENST00000490692 NF2P35240 595 aa13.16□□□□□ -0.3
PCSK9-202ENST00000490692 CCT5P48643 541 aa13.16□□□□□ -0.3
PCSK9-202ENST00000490692 CWF19L2Q2TBE0 894 aaKnown RBP13.16□□□□□ -0.3
PCSK9-202ENST00000490692 EXOC4Q96A65 974 aa13.16□□□□□ -0.3
PCSK9-202ENST00000490692 ODF2Q5BJF6 829 aa13.16□□□□□ -0.3
PCSK9-202ENST00000490692 KCNG4Q8TDN1 519 aa13.16□□□□□ -0.3
PCSK9-202ENST00000490692 U3KPZ7 1027 aaPredicted RBP13.16□□□□□ -0.3
PCSK9-202ENST00000490692 SSH2Q76I76 1423 aa13.16□□□□□ -0.3
PCSK9-202ENST00000490692 MYOM1P52179 1685 aa13.16□□□□□ -0.3
PCSK9-202ENST00000490692 CSB-PGBD3P0DP91 1061 aa13.16□□□□□ -0.3
PCSK9-202ENST00000490692 INPP5BP32019 993 aa13.16□□□□□ -0.3
PCSK9-202ENST00000490692 ATRIPQ8WXE1 791 aa13.16□□□□□ -0.3
PCSK9-202ENST00000490692 JADE2Q9NQC1 790 aa13.16□□□□□ -0.3
PCSK9-202ENST00000490692 DACH1Q9UI36 760 aa13.16□□□□□ -0.3
PCSK9-202ENST00000490692 RXRAP19793 462 aa13.15□□□□□ -0.3
PCSK9-202ENST00000490692 HMG20BQ9P0W2 317 aa13.15□□□□□ -0.3
PCSK9-202ENST00000490692 MAP3K2Q9Y2U5 619 aa13.15□□□□□ -0.3
PCSK9-202ENST00000490692 NRXN1Q9ULB1 1477 aa13.15□□□□□ -0.3
PCSK9-202ENST00000490692 ZMYND10O75800 440 aa13.15□□□□□ -0.3
PCSK9-202ENST00000490692 NYAP1Q6ZVC0 841 aa13.15□□□□□ -0.3
PCSK9-202ENST00000490692 FANCLQ9NW38 375 aa13.15□□□□□ -0.3
PCSK9-202ENST00000490692 PCDHA7Q9UN72 937 aa13.15□□□□□ -0.3
PCSK9-202ENST00000490692 ADGRB1O14514 1584 aa13.15□□□□□ -0.3
PCSK9-202ENST00000490692 KLF18A0A0U1RQI7 1052 aa13.15□□□□□ -0.3
PCSK9-202ENST00000490692 ZNF853P0CG23 659 aa13.15□□□□□ -0.3
PCSK9-202ENST00000490692 AFMP43652 599 aa13.15□□□□□ -0.3
PCSK9-202ENST00000490692 ARMCX5Q6P1M9 558 aa13.15□□□□□ -0.3
PCSK9-202ENST00000490692 CCDC85AQ96PX6 553 aaPredicted RBP13.15□□□□□ -0.3
PCSK9-202ENST00000490692 SNRKQ9NRH2 765 aa13.15□□□□□ -0.3
PCSK9-202ENST00000490692 STAP2Q9UGK3 403 aa13.15□□□□□ -0.3
PCSK9-202ENST00000490692 RIMBP3CA6NJZ7 1639 aa13.15□□□□□ -0.31
PCSK9-202ENST00000490692 RIMBP3BA6NNM3 1639 aa13.15□□□□□ -0.31
PCSK9-202ENST00000490692 RIMBP3Q9UFD9 1639 aa13.15□□□□□ -0.31
PCSK9-202ENST00000490692 CALRP27797 417 aaKnown RBP13.14□□□□□ -0.31
PCSK9-202ENST00000490692 TXLNAP40222 546 aa13.14□□□□□ -0.31
PCSK9-202ENST00000490692 SF3A3Q12874 501 aaKnown RBP eCLIP13.14□□□□□ -0.313e-8■■■□□ 16
PCSK9-202ENST00000490692 FAM76AQ8TAV0 307 aa13.14□□□□□ -0.31
PCSK9-202ENST00000490692 ATP6V1AP38606 617 aa13.14□□□□□ -0.31
PCSK9-202ENST00000490692 PNOCQ13519 176 aa13.14□□□□□ -0.31
PCSK9-202ENST00000490692 ZNF827Q17R98 1081 aa13.14□□□□□ -0.31
PCSK9-202ENST00000490692 SCLT1Q96NL6 688 aa13.14□□□□□ -0.31
PCSK9-202ENST00000490692 TM6SF1Q9BZW5 370 aa13.14□□□□□ -0.31
PCSK9-202ENST00000490692 TULP4Q9NRJ4 1543 aa13.14□□□□□ -0.31
PCSK9-202ENST00000490692 FRMD3A2A2Y4 597 aa13.14□□□□□ -0.31
PCSK9-202ENST00000490692 IQCB1Q15051 598 aa13.14□□□□□ -0.31
PCSK9-202ENST00000490692 MICU3Q86XE3 530 aa13.14□□□□□ -0.31
PCSK9-202ENST00000490692 FAM212AQ96EL1 285 aa13.14□□□□□ -0.31
PCSK9-202ENST00000490692 VIRMAQ69YN4 1812 aaKnown RBP13.14□□□□□ -0.31
PCSK9-202ENST00000490692 KIAA1210Q9ULL0 1709 aa13.14□□□□□ -0.31
PCSK9-202ENST00000490692 NDUFAB1O14561 156 aa13.14□□□□□ -0.31
PCSK9-202ENST00000490692 MAGEA9P43362 315 aa13.14□□□□□ -0.31
PCSK9-202ENST00000490692 RABGGTAQ92696 567 aa13.14□□□□□ -0.31
PCSK9-202ENST00000490692 IRX2Q9BZI1 471 aaPredicted RBP13.14□□□□□ -0.31
PCSK9-202ENST00000490692 GOLPH3LQ9H4A5 285 aa13.14□□□□□ -0.31
PCSK9-202ENST00000490692 MKRN1Q9UHC7 482 aaKnown RBP13.14□□□□□ -0.31
PCSK9-202ENST00000490692 CAPN7Q9Y6W3 813 aa13.14□□□□□ -0.31
PCSK9-202ENST00000490692 TTC41PQ6P2S7 1318 aa13.13□□□□□ -0.31
PCSK9-202ENST00000490692 NEXMIFQ5QGS0 1516 aa13.13□□□□□ -0.31
PCSK9-202ENST00000490692 NFE2L3Q9Y4A8 694 aa13.13□□□□□ -0.31
PCSK9-202ENST00000490692 SAMM50Q9Y512 469 aa13.13□□□□□ -0.31
PCSK9-202ENST00000490692 SIGLEC1Q9BZZ2 1709 aa13.13□□□□□ -0.31
PCSK9-202ENST00000490692 N4BP3O15049 544 aa13.13□□□□□ -0.31
PCSK9-202ENST00000490692 NLRP12P59046 1061 aa13.13□□□□□ -0.31
PCSK9-202ENST00000490692 SUGCTQ9HAC7 445 aa13.13□□□□□ -0.31
PCSK9-202ENST00000490692 PPLO60437 1756 aa13.13□□□□□ -0.31
PCSK9-202ENST00000490692 METP08581 1390 aa13.13□□□□□ -0.31
PCSK9-202ENST00000490692 BTBD11A6QL63 1104 aa13.13□□□□□ -0.31
PCSK9-202ENST00000490692 TADA3O75528 432 aa13.13□□□□□ -0.31
PCSK9-202ENST00000490692 H2AFXP16104 143 aaPredicted RBP13.13□□□□□ -0.31
PCSK9-202ENST00000490692 BRD3Q15059 726 aa13.13□□□□□ -0.31
PCSK9-202ENST00000490692 GPIHBP1Q8IV16 184 aa13.13□□□□□ -0.31
PCSK9-202ENST00000490692 WDR24Q96S15 920 aa13.13□□□□□ -0.31
PCSK9-202ENST00000490692 ABCB6Q9NP58 842 aa13.13□□□□□ -0.31
PCSK9-202ENST00000490692 PIK3R4Q99570 1358 aa13.12□□□□□ -0.31
PCSK9-202ENST00000490692 CCT6AP40227 531 aaKnown RBP13.12□□□□□ -0.31
PCSK9-202ENST00000490692 BCAS4Q8TDM0 211 aa13.12□□□□□ -0.31
PCSK9-202ENST00000490692 ZNHIT6Q9NWK9 470 aaKnown RBP13.12□□□□□ -0.31
PCSK9-202ENST00000490692 GOLGA6CA6NDK9 693 aa13.12□□□□□ -0.31
PCSK9-202ENST00000490692 GOLGA6DP0CG33 693 aa13.12□□□□□ -0.31
PCSK9-202ENST00000490692 EIF5P55010 431 aaKnown RBP13.12□□□□□ -0.31
PCSK9-202ENST00000490692 SARM1Q6SZW1 724 aa13.12□□□□□ -0.31
PCSK9-202ENST00000490692 NUP133Q8WUM0 1156 aa13.12□□□□□ -0.31
PCSK9-202ENST00000490692 JPH2Q9BR39 696 aaPredicted RBP13.12□□□□□ -0.31
PCSK9-202ENST00000490692 GOLGA6AQ9NYA3 693 aa13.12□□□□□ -0.31
PCSK9-202ENST00000490692 ARHGAP31Q2M1Z3 1444 aa13.12□□□□□ -0.31
PCSK9-202ENST00000490692 GOLGA6L7A0A1B0GV03 622 aa13.12□□□□□ -0.31
PCSK9-202ENST00000490692 GBP2P32456 591 aaPredicted RBP13.12□□□□□ -0.31
PCSK9-202ENST00000490692 IQSEC2Q5JU85 1478 aa13.11□□□□□ -0.31
PCSK9-202ENST00000490692 PIK3C2BO00750 1634 aa13.11□□□□□ -0.31
PCSK9-202ENST00000490692 GOLGA6L10A6NI86 522 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms