RNA–Protein interactions for RNA: ENST00000490416.2

NF1-214, Transcript of neurofibromin 1, humanhuman

TSL 3 BASIC

Gene NF1, Length 1,329 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-214ENST00000490416 CITED4Q96RK1 184 aa8.64□□□□□ -1.03
NF1-214ENST00000490416 TMC1Q8TDI8 760 aa8.63□□□□□ -1.03
NF1-214ENST00000490416 UBL7Q96S82 380 aaPredicted RBP8.63□□□□□ -1.03
NF1-214ENST00000490416 DHX15O43143 795 aaKnown RBP8.62□□□□□ -1.03
NF1-214ENST00000490416 UVSSAQ2YD98 709 aa8.62□□□□□ -1.03
NF1-214ENST00000490416 VN1R5Q7Z5H4 357 aa8.62□□□□□ -1.03
NF1-214ENST00000490416 SLC51AQ86UW1 340 aa8.62□□□□□ -1.03
NF1-214ENST00000490416 GALNT12Q8IXK2 581 aa8.62□□□□□ -1.03
NF1-214ENST00000490416 RUSC1Q9BVN2 902 aa8.62□□□□□ -1.03
NF1-214ENST00000490416 RAXQ9Y2V3 346 aa8.62□□□□□ -1.03
NF1-214ENST00000490416 SOX1O00570 391 aaPredicted RBP8.61□□□□□ -1.03
NF1-214ENST00000490416 SART1O43290 800 aaKnown RBP8.61□□□□□ -1.03
NF1-214ENST00000490416 UTP4Q969X6 686 aaKnown RBP8.61□□□□□ -1.03
NF1-214ENST00000490416 RNF208Q9H0X6 261 aa8.61□□□□□ -1.03
NF1-214ENST00000490416 EIF4EBP3O60516 100 aaPredicted RBP8.6□□□□□ -1.03
NF1-214ENST00000490416 CPNE3O75131 537 aaKnown RBP8.6□□□□□ -1.03
NF1-214ENST00000490416 FSTP19883 344 aa8.6□□□□□ -1.03
NF1-214ENST00000490416 ANKRD34AQ69YU3 496 aa8.6□□□□□ -1.03
NF1-214ENST00000490416 FAM129BQ96TA1 746 aa8.6□□□□□ -1.03
NF1-214ENST00000490416 SOX17Q9H6I2 414 aaPredicted RBP8.6□□□□□ -1.03
NF1-214ENST00000490416 LIN7BQ9HAP6 207 aa8.6□□□□□ -1.03
NF1-214ENST00000490416 STOML1Q9UBI4 398 aa8.6□□□□□ -1.03
NF1-214ENST00000490416 A0A1W2PP55 124 aa8.59□□□□□ -1.03
NF1-214ENST00000490416 HGSNATQ68CP4 663 aa8.59□□□□□ -1.03
NF1-214ENST00000490416 FDX2Q6P4F2 183 aa8.59□□□□□ -1.03
NF1-214ENST00000490416 FAM46AQ96IP4 442 aaKnown RBP8.59□□□□□ -1.03
NF1-214ENST00000490416 A0A096LPE4 126 aa8.58□□□□□ -1.04
NF1-214ENST00000490416 A0A1W2PPZ6 126 aa8.58□□□□□ -1.04
NF1-214ENST00000490416 METTL12A8MUP2 240 aa8.58□□□□□ -1.04
NF1-214ENST00000490416 GSC2O15499 205 aa8.58□□□□□ -1.04
NF1-214ENST00000490416 BRD1O95696 1058 aa8.58□□□□□ -1.04
NF1-214ENST00000490416 ESRRAP11474 423 aaPredicted RBP8.58□□□□□ -1.04
NF1-214ENST00000490416 ORC1Q13415 861 aa8.58□□□□□ -1.04
NF1-214ENST00000490416 ARTNQ5T4W7 220 aa8.58□□□□□ -1.04
NF1-214ENST00000490416 USPL1Q5W0Q7 1092 aa8.58□□□□□ -1.04
NF1-214ENST00000490416 CCNJLQ8IV13 435 aa8.58□□□□□ -1.04
NF1-214ENST00000490416 ARMC10Q8N2F6 343 aa8.58□□□□□ -1.04
NF1-214ENST00000490416 USP26Q9BXU7 913 aa8.58□□□□□ -1.04
NF1-214ENST00000490416 ZFP64Q9NPA5 681 aa8.58□□□□□ -1.04
NF1-214ENST00000490416 SOWAHDA6NJG2 315 aa8.57□□□□□ -1.04
NF1-214ENST00000490416 GSTM4Q03013 218 aa8.57□□□□□ -1.04
NF1-214ENST00000490416 NIF3L1Q9GZT8 377 aa8.57□□□□□ -1.04
NF1-214ENST00000490416 BIN2Q9UBW5 565 aaPredicted RBP8.57□□□□□ -1.04
NF1-214ENST00000490416 MEGF11A6BM72 1044 aa8.56□□□□□ -1.04
NF1-214ENST00000490416 PCDH1Q08174 1060 aa8.56□□□□□ -1.04
NF1-214ENST00000490416 LRP8Q14114 963 aa8.56□□□□□ -1.04
NF1-214ENST00000490416 KIAA0319Q5VV43 1072 aa8.56□□□□□ -1.04
NF1-214ENST00000490416 MYRFLQ96LU7 910 aa8.56□□□□□ -1.04
NF1-214ENST00000490416 DMRTB1Q96MA1 342 aa8.56□□□□□ -1.04
NF1-214ENST00000490416 TCF12Q99081 682 aa8.56□□□□□ -1.04
NF1-214ENST00000490416 DNAJC25Q9H1X3 360 aa8.56□□□□□ -1.04
NF1-214ENST00000490416 EHD4Q9H223 541 aa8.56□□□□□ -1.04
NF1-214ENST00000490416 CLEC4MQ9H2X3 399 aaPredicted RBP8.56□□□□□ -1.04
NF1-214ENST00000490416 RNF112Q9ULX5 631 aa8.56□□□□□ -1.04
NF1-214ENST00000490416 GAS2O43903 313 aaKnown RBP8.55□□□□□ -1.04
NF1-214ENST00000490416 SPRED3Q2MJR0 410 aa8.55□□□□□ -1.04
NF1-214ENST00000490416 NUTM2GQ5VZR2 741 aa8.55□□□□□ -1.04
NF1-214ENST00000490416 GNEQ9Y223 722 aaKnown RBP8.55□□□□□ -1.04
NF1-214ENST00000490416 LOC100289279A0A1B0GTE1 492 aa8.54□□□□□ -1.04
NF1-214ENST00000490416 EIF1AYO14602 144 aaKnown RBP8.54□□□□□ -1.04
NF1-214ENST00000490416 GPR182O15218 404 aa8.54□□□□□ -1.04
NF1-214ENST00000490416 IGLV1-40P01703 118 aa8.54□□□□□ -1.04
NF1-214ENST00000490416 BMP3P12645 472 aa8.54□□□□□ -1.04
NF1-214ENST00000490416 GRIA4P48058 902 aa8.54□□□□□ -1.04
NF1-214ENST00000490416 PREPP48147 710 aa8.54□□□□□ -1.04
NF1-214ENST00000490416 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.54□□□□□ -1.04
NF1-214ENST00000490416 DDX54Q8TDD1 881 aaKnown RBP8.54□□□□□ -1.04
NF1-214ENST00000490416 RBCK1Q9BYM8 510 aa8.54□□□□□ -1.04
NF1-214ENST00000490416 KCNF1Q9H3M0 494 aa8.54□□□□□ -1.04
NF1-214ENST00000490416 CYP4F12Q9HCS2 524 aa8.54□□□□□ -1.04
NF1-214ENST00000490416 NPHS2Q9NP85 383 aa8.54□□□□□ -1.04
NF1-214ENST00000490416 NBPF11Q86T75 865 aa8.54□□□□□ -1.04
NF1-214ENST00000490416 FAM20CQ8IXL6 584 aa8.54□□□□□ -1.04
NF1-214ENST00000490416 C12orf50Q8NA57 414 aaPredicted RBP8.54□□□□□ -1.04
NF1-214ENST00000490416 CCDC74AQ96AQ1 378 aa8.54□□□□□ -1.04
NF1-214ENST00000490416 C7orf69Q9H7B7 122 aa8.54□□□□□ -1.04
NF1-214ENST00000490416 HIF3AQ9Y2N7 669 aa8.54□□□□□ -1.04
NF1-214ENST00000490416 GADD45BO75293 160 aaPredicted RBP8.53□□□□□ -1.04
NF1-214ENST00000490416 EXOSC6Q5RKV6 272 aaKnown RBP8.53□□□□□ -1.04
NF1-214ENST00000490416 CLEC10AQ8IUN9 316 aa8.53□□□□□ -1.04
NF1-214ENST00000490416 TRIM42Q8IWZ5 723 aa8.53□□□□□ -1.04
NF1-214ENST00000490416 ALKBH8Q96BT7 664 aaKnown RBP8.53□□□□□ -1.04
NF1-214ENST00000490416 CSRNP1Q96S65 589 aa8.53□□□□□ -1.04
NF1-214ENST00000490416 TMPRSS13Q9BYE2 586 aa8.53□□□□□ -1.04
NF1-214ENST00000490416 IGHA2P01877 340 aa8.52□□□□□ -1.05
NF1-214ENST00000490416 CYP11A1P05108 521 aa8.52□□□□□ -1.05
NF1-214ENST00000490416 ZNF423Q2M1K9 1284 aa8.52□□□□□ -1.05
NF1-214ENST00000490416 HP1BP3Q5SSJ5 553 aaPredicted RBP8.52□□□□□ -1.05
NF1-214ENST00000490416 BEND4Q6ZU67 534 aa8.52□□□□□ -1.05
NF1-214ENST00000490416 SMG8Q8ND04 991 aaKnown RBP8.52□□□□□ -1.05
NF1-214ENST00000490416 FAM83CQ9BQN1 747 aa8.52□□□□□ -1.05
NF1-214ENST00000490416 SUGCTQ9HAC7 445 aa8.52□□□□□ -1.05
NF1-214ENST00000490416 ZFYVE1Q9HBF4 777 aa8.52□□□□□ -1.05
NF1-214ENST00000490416 DCTN4Q9UJW0 460 aa8.52□□□□□ -1.05
NF1-214ENST00000490416 HMX2A2RU54 273 aa8.51□□□□□ -1.05
NF1-214ENST00000490416 HYAL3O43820 417 aaPredicted RBP8.51□□□□□ -1.05
NF1-214ENST00000490416 NFIAQ12857 509 aa8.51□□□□□ -1.05
NF1-214ENST00000490416 RNF43Q68DV7 783 aa8.51□□□□□ -1.05
NF1-214ENST00000490416 TRAK1Q9UPV9 953 aa8.51□□□□□ -1.05
NF1-214ENST00000490416 ITPKAP23677 461 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms