RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 OGFOD1Q8N543 542 aa13.66□□□□□ -0.22
CPSF7-212ENST00000489728 SUGT1Q9Y2Z0 365 aa13.66□□□□□ -0.22
CPSF7-212ENST00000489728 FRAT2O75474 233 aaPredicted RBP13.65□□□□□ -0.22
CPSF7-212ENST00000489728 BCAMP50895 628 aa13.65□□□□□ -0.22
CPSF7-212ENST00000489728 C1QTNF8P60827 252 aa13.65□□□□□ -0.22
CPSF7-212ENST00000489728 TNNI3KQ59H18 835 aa13.65□□□□□ -0.22
CPSF7-212ENST00000489728 CHADLQ6NUI6 762 aa13.65□□□□□ -0.22
CPSF7-212ENST00000489728 KIF1BPQ96EK5 621 aa13.65□□□□□ -0.22
CPSF7-212ENST00000489728 CRBNQ96SW2 442 aa13.65□□□□□ -0.22
CPSF7-212ENST00000489728 HDAC9Q9UKV0 1011 aa13.65□□□□□ -0.22
CPSF7-212ENST00000489728 SUPT16HQ9Y5B9 1047 aaKnown RBP13.65□□□□□ -0.22
CPSF7-212ENST00000489728 FPGT-TNNI3KV9GXZ4 949 aa13.65□□□□□ -0.22
CPSF7-212ENST00000489728 CCDC102BQ68D86 513 aa13.64□□□□□ -0.23
CPSF7-212ENST00000489728 WDR66Q8TBY9 1149 aa13.64□□□□□ -0.23
CPSF7-212ENST00000489728 FBXW7Q969H0 707 aa13.64□□□□□ -0.23
CPSF7-212ENST00000489728 XAGE2Q96GT9 111 aa13.64□□□□□ -0.23
CPSF7-212ENST00000489728 PGAP2Q9UHJ9 254 aa13.64□□□□□ -0.23
CPSF7-212ENST00000489728 DENND2AQ9ULE3 1009 aa13.64□□□□□ -0.23
CPSF7-212ENST00000489728 EXOC6BQ9Y2D4 811 aa13.64□□□□□ -0.23
CPSF7-212ENST00000489728 SALL1Q9NSC2 1324 aa13.64□□□□□ -0.23
CPSF7-212ENST00000489728 UQCRFS1P1P0C7P4 283 aa13.63□□□□□ -0.23
CPSF7-212ENST00000489728 TIMM10P62072 90 aa13.63□□□□□ -0.23
CPSF7-212ENST00000489728 KIF4BQ2VIQ3 1234 aa13.63□□□□□ -0.23
CPSF7-212ENST00000489728 EAPPQ56P03 285 aaPredicted RBP13.63□□□□□ -0.23
CPSF7-212ENST00000489728 MFSD14BQ5SR56 506 aa13.63□□□□□ -0.23
CPSF7-212ENST00000489728 ZNF512BQ96KM6 892 aaPredicted RBP13.63□□□□□ -0.23
CPSF7-212ENST00000489728 MYOZ2Q9NPC6 264 aa13.63□□□□□ -0.23
CPSF7-212ENST00000489728 MAST3O60307 1309 aa13.63□□□□□ -0.23
CPSF7-212ENST00000489728 IGSF3O75054 1194 aa13.62□□□□□ -0.23
CPSF7-212ENST00000489728 ARID4AP29374 1257 aaPredicted RBP13.62□□□□□ -0.23
CPSF7-212ENST00000489728 ADORA1P30542 326 aa13.62□□□□□ -0.23
CPSF7-212ENST00000489728 PHKA1P46020 1223 aa13.62□□□□□ -0.23
CPSF7-212ENST00000489728 GORABQ5T7V8 394 aa13.62□□□□□ -0.23
CPSF7-212ENST00000489728 CLASRPQ8N2M8 674 aaKnown RBP13.62□□□□□ -0.23
CPSF7-212ENST00000489728 ZGPATQ8N5A5 531 aaKnown RBP13.62□□□□□ -0.23
CPSF7-212ENST00000489728 CERS5Q8N5B7 392 aa13.62□□□□□ -0.23
CPSF7-212ENST00000489728 MTMR14Q8NCE2 650 aa13.62□□□□□ -0.23
CPSF7-212ENST00000489728 RHPN1Q8TCX5 695 aa13.62□□□□□ -0.23
CPSF7-212ENST00000489728 TRPM4Q8TD43 1214 aa13.62□□□□□ -0.23
CPSF7-212ENST00000489728 NEUROD6Q96NK8 337 aa13.62□□□□□ -0.23
CPSF7-212ENST00000489728 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.62□□□□□ -0.23
CPSF7-212ENST00000489728 PITPNM2Q9BZ72 1349 aa13.62□□□□□ -0.23
CPSF7-212ENST00000489728 COL1A1P02452 1464 aaPredicted RBP13.61□□□□□ -0.23
CPSF7-212ENST00000489728 POTEIP0CG38 1075 aa13.61□□□□□ -0.23
CPSF7-212ENST00000489728 POTEJP0CG39 1038 aa13.61□□□□□ -0.23
CPSF7-212ENST00000489728 HDLBPQ00341 1268 aaKnown RBP13.61□□□□□ -0.23
CPSF7-212ENST00000489728 HDAC1Q13547 482 aaPredicted RBP13.61□□□□□ -0.23
CPSF7-212ENST00000489728 CCDC158Q5M9N0 1113 aa13.61□□□□□ -0.23
CPSF7-212ENST00000489728 MRIQ9BWK5 157 aa13.61□□□□□ -0.23
CPSF7-212ENST00000489728 DCTPP1Q9H773 170 aa13.61□□□□□ -0.23
CPSF7-212ENST00000489728 SERPINA10Q9UK55 444 aa13.61□□□□□ -0.23
CPSF7-212ENST00000489728 PCDHB15Q9Y5E8 787 aa13.61□□□□□ -0.23
CPSF7-212ENST00000489728 ECM29Q5VYK3 1845 aa13.6□□□□□ -0.23
CPSF7-212ENST00000489728 SHTN1A0MZ66 631 aa13.6□□□□□ -0.23
CPSF7-212ENST00000489728 HIRAP54198 1017 aaPredicted RBP13.6□□□□□ -0.23
CPSF7-212ENST00000489728 RASGRF1Q13972 1273 aa13.6□□□□□ -0.23
CPSF7-212ENST00000489728 TBC1D10BQ4KMP7 808 aaPredicted RBP13.6□□□□□ -0.23
CPSF7-212ENST00000489728 SAMD7Q7Z3H4 446 aa13.6□□□□□ -0.23
CPSF7-212ENST00000489728 KIAA0825Q8IV33 1275 aa13.6□□□□□ -0.23
CPSF7-212ENST00000489728 MXD3Q9BW11 206 aa13.6□□□□□ -0.23
CPSF7-212ENST00000489728 LRRCC1Q9C099 1032 aa13.6□□□□□ -0.23
CPSF7-212ENST00000489728 IQSEC3Q9UPP2 1182 aaPredicted RBP13.6□□□□□ -0.23
CPSF7-212ENST00000489728 CLEC11AQ9Y240 323 aa13.6□□□□□ -0.23
CPSF7-212ENST00000489728 CHAF1AQ13111 956 aaPredicted RBP13.59□□□□□ -0.23
CPSF7-212ENST00000489728 EAF2Q96CJ1 260 aaPredicted RBP13.59□□□□□ -0.23
CPSF7-212ENST00000489728 ZBED3Q96IU2 234 aaPredicted RBP13.59□□□□□ -0.23
CPSF7-212ENST00000489728 DBNLQ9UJU6 430 aaKnown RBP13.59□□□□□ -0.23
CPSF7-212ENST00000489728 ITGBL1O95965 494 aaPredicted RBP13.58□□□□□ -0.24
CPSF7-212ENST00000489728 EGFRP00533 1210 aa13.58□□□□□ -0.24
CPSF7-212ENST00000489728 HSPA6P17066 643 aa13.58□□□□□ -0.24
CPSF7-212ENST00000489728 DLGAP5Q15398 846 aa13.58□□□□□ -0.24
CPSF7-212ENST00000489728 TTC39AQ5SRH9 613 aa13.58□□□□□ -0.24
CPSF7-212ENST00000489728 SPTY2D1Q68D10 685 aaPredicted RBP13.58□□□□□ -0.24
CPSF7-212ENST00000489728 CDC37L1Q7L3B6 337 aa13.58□□□□□ -0.24
CPSF7-212ENST00000489728 AACSQ86V21 672 aa13.58□□□□□ -0.24
CPSF7-212ENST00000489728 CNTROBQ8N137 903 aa13.58□□□□□ -0.24
CPSF7-212ENST00000489728 SPATA5Q8NB90 893 aa13.58□□□□□ -0.24
CPSF7-212ENST00000489728 DBNDD2Q9BQY9 259 aa13.58□□□□□ -0.24
CPSF7-212ENST00000489728 TTF2Q9UNY4 1162 aaKnown RBP13.58□□□□□ -0.24
CPSF7-212ENST00000489728 PASKQ96RG2 1323 aa13.58□□□□□ -0.24
CPSF7-212ENST00000489728 WNT10BO00744 389 aa13.57□□□□□ -0.24
CPSF7-212ENST00000489728 MYO1BO43795 1136 aa13.57□□□□□ -0.24
CPSF7-212ENST00000489728 SCARF1Q14162 830 aa13.57□□□□□ -0.24
CPSF7-212ENST00000489728 TMED8Q6PL24 325 aaPredicted RBP13.57□□□□□ -0.24
CPSF7-212ENST00000489728 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.57□□□□□ -0.24
CPSF7-212ENST00000489728 TEKT1Q969V4 418 aa13.57□□□□□ -0.24
CPSF7-212ENST00000489728 DCPSQ96C86 337 aaKnown RBP13.57□□□□□ -0.24
CPSF7-212ENST00000489728 GCC1Q96CN9 775 aa13.57□□□□□ -0.24
CPSF7-212ENST00000489728 GGA3Q9NZ52 723 aa13.57□□□□□ -0.24
CPSF7-212ENST00000489728 HMG20BQ9P0W2 317 aa13.57□□□□□ -0.24
CPSF7-212ENST00000489728 JAG2Q9Y219 1238 aa13.57□□□□□ -0.24
CPSF7-212ENST00000489728 AKAP11Q9UKA4 1901 aa13.56□□□□□ -0.24
CPSF7-212ENST00000489728 MAST2Q6P0Q8 1798 aa13.56□□□□□ -0.24
CPSF7-212ENST00000489728 SPDYE2BA6NHP3 402 aa13.56□□□□□ -0.24
CPSF7-212ENST00000489728 LDHBP07195 334 aaKnown RBP13.56□□□□□ -0.24
CPSF7-212ENST00000489728 IFIT2P09913 472 aaKnown RBP13.56□□□□□ -0.24
CPSF7-212ENST00000489728 SPDYE6P0CI01 402 aa13.56□□□□□ -0.24
CPSF7-212ENST00000489728 APLP1P51693 650 aa13.56□□□□□ -0.24
CPSF7-212ENST00000489728 CFAP100Q494V2 611 aa13.56□□□□□ -0.24
CPSF7-212ENST00000489728 RBM26Q5T8P6 1007 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms