RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 K7ELQ4 463 aaPredicted RBP7.67□□□□□ -1.18
SF3A3-208ENST00000489537 IGSF3O75054 1194 aa7.67□□□□□ -1.18
SF3A3-208ENST00000489537 A1BGP04217 495 aa7.67□□□□□ -1.18
SF3A3-208ENST00000489537 ZKSCAN1P17029 563 aaPredicted RBP7.67□□□□□ -1.18
SF3A3-208ENST00000489537 ATP5JP18859 108 aa7.67□□□□□ -1.18
SF3A3-208ENST00000489537 CASP7P55210 303 aa7.67□□□□□ -1.18
SF3A3-208ENST00000489537 PTGDRQ13258 359 aa7.67□□□□□ -1.18
SF3A3-208ENST00000489537 IFIT5Q13325 482 aaKnown RBP7.67□□□□□ -1.18
SF3A3-208ENST00000489537 ITPK1Q13572 414 aa7.67□□□□□ -1.18
SF3A3-208ENST00000489537 TAF7LQ5H9L4 462 aa7.67□□□□□ -1.18
SF3A3-208ENST00000489537 SLC27A3Q5K4L6 730 aa7.67□□□□□ -1.18
SF3A3-208ENST00000489537 RC3H1Q5TC82 1133 aaKnown RBP7.67□□□□□ -1.18
SF3A3-208ENST00000489537 SMYD5Q6GMV2 418 aa7.67□□□□□ -1.18
SF3A3-208ENST00000489537 LMBR1LQ6UX01 489 aa7.67□□□□□ -1.18
SF3A3-208ENST00000489537 DZIP3Q86Y13 1208 aaKnown RBP7.67□□□□□ -1.18
SF3A3-208ENST00000489537 C16orf71Q8IYS4 520 aaPredicted RBP7.67□□□□□ -1.18
SF3A3-208ENST00000489537 LINC00116Q8NCU8 138 aa7.67□□□□□ -1.18
SF3A3-208ENST00000489537 TBC1D2Q9BYX2 928 aa7.67□□□□□ -1.18
SF3A3-208ENST00000489537 IL1RAPL2Q9NP60 686 aa7.67□□□□□ -1.18
SF3A3-208ENST00000489537 TFCP2L1Q9NZI6 479 aa7.67□□□□□ -1.18
SF3A3-208ENST00000489537 PALLDQ8WX93 1383 aa7.67□□□□□ -1.18
SF3A3-208ENST00000489537 C5P01031 1676 aa7.67□□□□□ -1.18
SF3A3-208ENST00000489537 LOC102724428A0A0B4J2F2 783 aa7.66□□□□□ -1.18
SF3A3-208ENST00000489537 ATP5J2-PTCD1G3V325 749 aa7.66□□□□□ -1.18
SF3A3-208ENST00000489537 GOLGA6L22H0YM25 854 aa7.66□□□□□ -1.18
SF3A3-208ENST00000489537 EYA2O00167 538 aa7.66□□□□□ -1.18
SF3A3-208ENST00000489537 PDE8AO60658 829 aa7.66□□□□□ -1.18
SF3A3-208ENST00000489537 YBX3P16989 372 aaKnown RBP eCLIP7.66□□□□□ -1.181e-7■■■□□ 16.2
SF3A3-208ENST00000489537 DNAJB2P25686 324 aa7.66□□□□□ -1.18
SF3A3-208ENST00000489537 PSMA5P28066 241 aa7.66□□□□□ -1.18
SF3A3-208ENST00000489537 GGCXP38435 758 aa7.66□□□□□ -1.18
SF3A3-208ENST00000489537 ATP6V1AP38606 617 aa7.66□□□□□ -1.18
SF3A3-208ENST00000489537 SIK1P57059 783 aa7.66□□□□□ -1.18
SF3A3-208ENST00000489537 NUCB2P80303 420 aa7.66□□□□□ -1.18
SF3A3-208ENST00000489537 PLCB2Q00722 1185 aa7.66□□□□□ -1.18
SF3A3-208ENST00000489537 PTPN12Q05209 780 aaKnown RBP7.66□□□□□ -1.18
SF3A3-208ENST00000489537 CCDC158Q5M9N0 1113 aa7.66□□□□□ -1.18
SF3A3-208ENST00000489537 TMED8Q6PL24 325 aaPredicted RBP7.66□□□□□ -1.18
SF3A3-208ENST00000489537 PI4K2BQ8TCG2 481 aa7.66□□□□□ -1.18
SF3A3-208ENST00000489537 ZBTB3Q9H5J0 574 aa7.66□□□□□ -1.18
SF3A3-208ENST00000489537 HMG20BQ9P0W2 317 aa7.66□□□□□ -1.18
SF3A3-208ENST00000489537 CHMP3Q9Y3E7 222 aa7.66□□□□□ -1.18
SF3A3-208ENST00000489537 CICQ96RK0 1608 aaPredicted RBP7.66□□□□□ -1.18
SF3A3-208ENST00000489537 ZNF831Q5JPB2 1677 aa7.66□□□□□ -1.18
SF3A3-208ENST00000489537 ANKRD18BA2A2Z9 1011 aa7.65□□□□□ -1.18
SF3A3-208ENST00000489537 SGSM2O43147 1006 aa7.65□□□□□ -1.18
SF3A3-208ENST00000489537 CSF1RP07333 972 aa7.65□□□□□ -1.18
SF3A3-208ENST00000489537 ZFYP08048 801 aaPredicted RBP7.65□□□□□ -1.18
SF3A3-208ENST00000489537 RFX5P48382 616 aaPredicted RBP7.65□□□□□ -1.18
SF3A3-208ENST00000489537 EIF5P55010 431 aaKnown RBP7.65□□□□□ -1.18
SF3A3-208ENST00000489537 FOXO4P98177 505 aa7.65□□□□□ -1.18
SF3A3-208ENST00000489537 KRT32Q14532 448 aa7.65□□□□□ -1.18
SF3A3-208ENST00000489537 TTF1Q15361 905 aaPredicted RBP7.65□□□□□ -1.18
SF3A3-208ENST00000489537 TNNI3KQ59H18 835 aa7.65□□□□□ -1.18
SF3A3-208ENST00000489537 ZSCAN25Q6NSZ9 544 aa7.65□□□□□ -1.18
SF3A3-208ENST00000489537 TTLL7Q6ZT98 887 aa7.65□□□□□ -1.18
SF3A3-208ENST00000489537 NUTM1Q86Y26 1132 aa7.65□□□□□ -1.18
SF3A3-208ENST00000489537 ZNF784Q8NCA9 323 aaPredicted RBP7.65□□□□□ -1.18
SF3A3-208ENST00000489537 KAZALD1Q96I82 304 aa7.65□□□□□ -1.18
SF3A3-208ENST00000489537 GBP4Q96PP9 640 aa7.65□□□□□ -1.18
SF3A3-208ENST00000489537 CNTNAP4Q9C0A0 1308 aa7.65□□□□□ -1.18
SF3A3-208ENST00000489537 NYXQ9GZU5 481 aa7.65□□□□□ -1.18
SF3A3-208ENST00000489537 ANO2Q9NQ90 1003 aa7.65□□□□□ -1.18
SF3A3-208ENST00000489537 TRMT112Q9UI30 125 aaKnown RBP7.65□□□□□ -1.18
SF3A3-208ENST00000489537 WWC3Q9ULE0 1092 aa7.65□□□□□ -1.18
SF3A3-208ENST00000489537 FPGT-TNNI3KV9GXZ4 949 aa7.65□□□□□ -1.18
SF3A3-208ENST00000489537 UBR3Q6ZT12 1888 aa7.64□□□□□ -1.19
SF3A3-208ENST00000489537 C4BP0C0L5 1744 aa7.64□□□□□ -1.19
SF3A3-208ENST00000489537 MROH5Q6ZUA9 1318 aa7.64□□□□□ -1.19
SF3A3-208ENST00000489537 SH3TC1Q8TE82 1336 aa7.64□□□□□ -1.19
SF3A3-208ENST00000489537 SASH1O94885 1247 aa7.64□□□□□ -1.19
SF3A3-208ENST00000489537 CRKLP46109 303 aaKnown RBP7.64□□□□□ -1.19
SF3A3-208ENST00000489537 APLP1P51693 650 aa7.64□□□□□ -1.19
SF3A3-208ENST00000489537 ANKRD1Q15327 319 aa7.64□□□□□ -1.19
SF3A3-208ENST00000489537 GORABQ5T7V8 394 aa7.64□□□□□ -1.19
SF3A3-208ENST00000489537 NLRP10Q86W26 655 aa7.64□□□□□ -1.19
SF3A3-208ENST00000489537 ZNF34Q8IZ26 560 aa7.64□□□□□ -1.19
SF3A3-208ENST00000489537 OTUD7AQ8TE49 926 aaPredicted RBP7.64□□□□□ -1.19
SF3A3-208ENST00000489537 INTS4Q96HW7 963 aaKnown RBP7.64□□□□□ -1.19
SF3A3-208ENST00000489537 ZNF512BQ96KM6 892 aaPredicted RBP7.64□□□□□ -1.19
SF3A3-208ENST00000489537 CDC5LQ99459 802 aaKnown RBP7.64□□□□□ -1.19
SF3A3-208ENST00000489537 UTP14AQ9BVJ6 771 aaKnown RBP7.64□□□□□ -1.19
SF3A3-208ENST00000489537 TM6SF1Q9BZW5 370 aa7.64□□□□□ -1.19
SF3A3-208ENST00000489537 SNRKQ9NRH2 765 aa7.64□□□□□ -1.19
SF3A3-208ENST00000489537 ZNF330Q9Y3S2 320 aaPredicted RBP7.64□□□□□ -1.19
SF3A3-208ENST00000489537 ARFGEF2Q9Y6D5 1785 aa7.64□□□□□ -1.19
SF3A3-208ENST00000489537 RTL9Q8NET4 1388 aa7.63□□□□□ -1.19
SF3A3-208ENST00000489537 DDX11L8A8MPP1 907 aa7.63□□□□□ -1.19
SF3A3-208ENST00000489537 IRS4O14654 1257 aaPredicted RBP7.63□□□□□ -1.19
SF3A3-208ENST00000489537 SEMA3EO15041 775 aa7.63□□□□□ -1.19
SF3A3-208ENST00000489537 HMGB1P09429 215 aaKnown RBP7.63□□□□□ -1.19
SF3A3-208ENST00000489537 UQCRFS1P1P0C7P4 283 aa7.63□□□□□ -1.19
SF3A3-208ENST00000489537 HSPA4P34932 840 aa7.63□□□□□ -1.19
SF3A3-208ENST00000489537 CTSWP56202 376 aa7.63□□□□□ -1.19
SF3A3-208ENST00000489537 LAPTM4AQ15012 233 aa7.63□□□□□ -1.19
SF3A3-208ENST00000489537 SKOR2Q2VWA4 1001 aaPredicted RBP7.63□□□□□ -1.19
SF3A3-208ENST00000489537 CCDC152Q4G0S7 254 aa7.63□□□□□ -1.19
SF3A3-208ENST00000489537 EAF2Q96CJ1 260 aaPredicted RBP7.63□□□□□ -1.19
SF3A3-208ENST00000489537 ZSCAN31Q96LW9 406 aaPredicted RBP7.63□□□□□ -1.19
SF3A3-208ENST00000489537 HAUS7Q99871 368 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms