RNA–Protein interactions for RNA: ENST00000489169.1

CACUL1-204, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 2

Gene CACUL1, Length 517 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-204ENST00000489169 C1orf216Q8TAB5 229 aa9.53□□□□□ -0.88
CACUL1-204ENST00000489169 IGSF5Q9NSI5 407 aa9.53□□□□□ -0.88
CACUL1-204ENST00000489169 EP400Q96L91 3159 aa9.53□□□□□ -0.88
CACUL1-204ENST00000489169 CAMTA1Q9Y6Y1 1673 aa9.52□□□□□ -0.89
CACUL1-204ENST00000489169 SOWAHDA6NJG2 315 aa9.52□□□□□ -0.89
CACUL1-204ENST00000489169 DHX9Q08211 1270 aaKnown RBP9.52□□□□□ -0.89
CACUL1-204ENST00000489169 ZBTB33Q86T24 672 aa9.52□□□□□ -0.89
CACUL1-204ENST00000489169 LRRC59Q96AG4 307 aaKnown RBP9.52□□□□□ -0.89
CACUL1-204ENST00000489169 HSPA6P17066 643 aa9.51□□□□□ -0.89
CACUL1-204ENST00000489169 GNAI1P63096 354 aa9.51□□□□□ -0.89
CACUL1-204ENST00000489169 R3HDM1Q15032 1099 aaKnown RBP9.51□□□□□ -0.89
CACUL1-204ENST00000489169 AMOTQ4VCS5 1084 aa9.51□□□□□ -0.89
CACUL1-204ENST00000489169 IFT57Q9NWB7 429 aa9.51□□□□□ -0.89
CACUL1-204ENST00000489169 PPP1R1BQ9UD71 204 aaPredicted RBP9.51□□□□□ -0.89
CACUL1-204ENST00000489169 RRP7AQ9Y3A4 280 aaKnown RBP9.51□□□□□ -0.89
CACUL1-204ENST00000489169 ATP2B4P23634 1241 aa9.5□□□□□ -0.89
CACUL1-204ENST00000489169 PTSQ03393 145 aa9.5□□□□□ -0.89
CACUL1-204ENST00000489169 INTS6LQ5JSJ4 861 aaKnown RBP9.5□□□□□ -0.89
CACUL1-204ENST00000489169 OGFOD1Q8N543 542 aa9.5□□□□□ -0.89
CACUL1-204ENST00000489169 ANKRD24Q8TF21 1146 aa9.5□□□□□ -0.89
CACUL1-204ENST00000489169 PHACTR3Q96KR7 559 aa9.5□□□□□ -0.89
CACUL1-204ENST00000489169 C8orf37Q96NL8 207 aa9.5□□□□□ -0.89
CACUL1-204ENST00000489169 BABAM1Q9NWV8 329 aa9.5□□□□□ -0.89
CACUL1-204ENST00000489169 PPP4R2Q9NY27 417 aa9.5□□□□□ -0.89
CACUL1-204ENST00000489169 COL18A1P39060 1754 aa9.5□□□□□ -0.89
CACUL1-204ENST00000489169 COL22A1Q8NFW1 1626 aaPredicted RBP9.49□□□□□ -0.89
CACUL1-204ENST00000489169 LMO7Q8WWI1 1683 aa9.49□□□□□ -0.89
CACUL1-204ENST00000489169 RRP1P56182 461 aaKnown RBP9.49□□□□□ -0.89
CACUL1-204ENST00000489169 DPYDQ12882 1025 aa9.49□□□□□ -0.89
CACUL1-204ENST00000489169 EML3Q32P44 896 aa9.49□□□□□ -0.89
CACUL1-204ENST00000489169 NOM1Q5C9Z4 860 aaKnown RBP9.49□□□□□ -0.89
CACUL1-204ENST00000489169 TRIM50Q86XT4 487 aa9.49□□□□□ -0.89
CACUL1-204ENST00000489169 ADAM32Q8TC27 787 aa9.49□□□□□ -0.89
CACUL1-204ENST00000489169 RTF1Q92541 710 aaKnown RBP9.49□□□□□ -0.89
CACUL1-204ENST00000489169 DDX17Q92841 729 aaKnown RBP9.49□□□□□ -0.89
CACUL1-204ENST00000489169 PCDHB9Q9Y5E1 797 aa9.49□□□□□ -0.89
CACUL1-204ENST00000489169 OVOS2A0A0G2JMS6 1433 aa9.48□□□□□ -0.89
CACUL1-204ENST00000489169 ABCA3Q99758 1704 aa9.48□□□□□ -0.89
CACUL1-204ENST00000489169 DKK1O94907 266 aa9.48□□□□□ -0.89
CACUL1-204ENST00000489169 PLEKHO1Q53GL0 409 aaPredicted RBP9.48□□□□□ -0.89
CACUL1-204ENST00000489169 LARGE2Q8N3Y3 721 aa9.48□□□□□ -0.89
CACUL1-204ENST00000489169 NANOS1Q8WY41 292 aaKnown RBP9.48□□□□□ -0.89
CACUL1-204ENST00000489169 PRDM11Q9NQV5 511 aa9.48□□□□□ -0.89
CACUL1-204ENST00000489169 SOS1Q07889 1333 aaPredicted RBP9.48□□□□□ -0.89
CACUL1-204ENST00000489169 FANCIQ9NVI1 1328 aa9.48□□□□□ -0.89
CACUL1-204ENST00000489169 KIAA0232Q92628 1395 aa9.48□□□□□ -0.89
CACUL1-204ENST00000489169 MAP3K5Q99683 1374 aa9.48□□□□□ -0.89
CACUL1-204ENST00000489169 DLG5Q8TDM6 1919 aa9.47□□□□□ -0.89
CACUL1-204ENST00000489169 GNAT3A8MTJ3 354 aa9.47□□□□□ -0.89
CACUL1-204ENST00000489169 ZBTB7BO15156 539 aaPredicted RBP9.47□□□□□ -0.89
CACUL1-204ENST00000489169 ZNF853P0CG23 659 aa9.47□□□□□ -0.89
CACUL1-204ENST00000489169 ATP1A2P50993 1020 aa9.47□□□□□ -0.89
CACUL1-204ENST00000489169 ZC3H6P61129 1189 aaKnown RBP9.47□□□□□ -0.89
CACUL1-204ENST00000489169 CLDN10P78369 228 aa9.47□□□□□ -0.89
CACUL1-204ENST00000489169 KRT76Q01546 638 aa9.47□□□□□ -0.89
CACUL1-204ENST00000489169 NBPF6Q5VWK0 638 aa9.47□□□□□ -0.89
CACUL1-204ENST00000489169 GPR161Q8N6U8 529 aaKnown RBP9.47□□□□□ -0.89
CACUL1-204ENST00000489169 LTV1Q96GA3 475 aaPredicted RBP9.47□□□□□ -0.89
CACUL1-204ENST00000489169 NBPF4Q96M43 638 aa9.47□□□□□ -0.89
CACUL1-204ENST00000489169 FIGNL2A6NMB9 653 aa9.46□□□□□ -0.9
CACUL1-204ENST00000489169 SERPINB4P48594 390 aa9.46□□□□□ -0.9
CACUL1-204ENST00000489169 MTHFSDQ2M296 383 aaKnown RBP9.46□□□□□ -0.9
CACUL1-204ENST00000489169 NBPF20Q3BBV1 942 aa9.46□□□□□ -0.9
CACUL1-204ENST00000489169 CHMP4AQ9BY43 222 aa9.46□□□□□ -0.9
CACUL1-204ENST00000489169 DNAAF2Q9NVR5 837 aaKnown RBP9.46□□□□□ -0.9
CACUL1-204ENST00000489169 SLC35F4A4IF30 521 aa9.45□□□□□ -0.9
CACUL1-204ENST00000489169 AAMPQ13685 434 aa9.45□□□□□ -0.9
CACUL1-204ENST00000489169 TSGA10IPQ3SY00 556 aa9.45□□□□□ -0.9
CACUL1-204ENST00000489169 ALDH1L2Q3SY69 923 aa9.45□□□□□ -0.9
CACUL1-204ENST00000489169 AKAP4Q5JQC9 854 aa9.45□□□□□ -0.9
CACUL1-204ENST00000489169 TAS1R3Q7RTX0 852 aa9.45□□□□□ -0.9
CACUL1-204ENST00000489169 SIX5Q8N196 739 aa9.45□□□□□ -0.9
CACUL1-204ENST00000489169 CCDC155Q8N6L0 562 aa9.45□□□□□ -0.9
CACUL1-204ENST00000489169 RAPGEF4Q8WZA2 1011 aa9.45□□□□□ -0.9
CACUL1-204ENST00000489169 KIAA1522Q9P206 1035 aaPredicted RBP9.45□□□□□ -0.9
CACUL1-204ENST00000489169 NOD1Q9Y239 953 aa9.45□□□□□ -0.9
CACUL1-204ENST00000489169 WDR17Q8IZU2 1322 aa9.45□□□□□ -0.9
CACUL1-204ENST00000489169 LRRC37A3O60309 1634 aa9.45□□□□□ -0.9
CACUL1-204ENST00000489169 CHL1O00533 1208 aa9.44□□□□□ -0.9
CACUL1-204ENST00000489169 ZNF16P17020 682 aaPredicted RBP9.44□□□□□ -0.9
CACUL1-204ENST00000489169 TATP17735 454 aaPredicted RBP9.44□□□□□ -0.9
CACUL1-204ENST00000489169 CTSOP43234 321 aaPredicted RBP9.44□□□□□ -0.9
CACUL1-204ENST00000489169 RARSP54136 660 aaKnown RBP9.44□□□□□ -0.9
CACUL1-204ENST00000489169 MARSP56192 900 aaKnown RBP9.44□□□□□ -0.9
CACUL1-204ENST00000489169 PDE3AQ14432 1141 aa9.44□□□□□ -0.9
CACUL1-204ENST00000489169 C1orf141Q5JVX7 400 aa9.44□□□□□ -0.9
CACUL1-204ENST00000489169 AGBL1Q96MI9 1066 aa9.44□□□□□ -0.9
CACUL1-204ENST00000489169 EGFL7Q9UHF1 273 aa9.44□□□□□ -0.9
CACUL1-204ENST00000489169 WWC3Q9ULE0 1092 aa9.44□□□□□ -0.9
CACUL1-204ENST00000489169 CEMIPQ8WUJ3 1361 aa9.44□□□□□ -0.9
CACUL1-204ENST00000489169 CRB1P82279 1406 aa9.44□□□□□ -0.9
CACUL1-204ENST00000489169 COL14A1Q05707 1796 aaKnown RBP9.44□□□□□ -0.9
CACUL1-204ENST00000489169 COL5A2P05997 1499 aaPredicted RBP9.43□□□□□ -0.9
CACUL1-204ENST00000489169 KIF16BQ96L93 1317 aa9.43□□□□□ -0.9
CACUL1-204ENST00000489169 ESPNB1AK53 854 aa9.43□□□□□ -0.9
CACUL1-204ENST00000489169 HSP90AB1P08238 724 aaKnown RBP9.43□□□□□ -0.9
CACUL1-204ENST00000489169 BAG6P46379 1132 aa9.43□□□□□ -0.9
CACUL1-204ENST00000489169 CARD10Q9BWT7 1032 aa9.43□□□□□ -0.9
CACUL1-204ENST00000489169 NLRP2Q9NX02 1062 aa9.43□□□□□ -0.9
CACUL1-204ENST00000489169 TRPC5Q9UL62 973 aaPredicted RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms