RNA–Protein interactions for RNA: ENST00000488553.3

RN7SL561P-201, Transcript of RNA, 7SL, cytoplasmic 561, pseudogene, humanhuman

BASIC

Gene RN7SL561P, Length 281 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL561P-201ENST00000488553 FOXD4L4Q8WXT5 416 aaPredicted RBP8□□□□□ -1.13
RN7SL561P-201ENST00000488553 CELF1Q92879 486 aaKnown RBP8□□□□□ -1.13
RN7SL561P-201ENST00000488553 STRBPQ96SI9 672 aaKnown RBP8□□□□□ -1.13
RN7SL561P-201ENST00000488553 GZF1Q9H116 711 aaPredicted RBP8□□□□□ -1.13
RN7SL561P-201ENST00000488553 DDX60Q8IY21 1712 aaKnown RBP8□□□□□ -1.13
RN7SL561P-201ENST00000488553 ZNF804BA4D1E1 1349 aa8□□□□□ -1.13
RN7SL561P-201ENST00000488553 BCORQ6W2J9 1755 aa7.99□□□□□ -1.13
RN7SL561P-201ENST00000488553 KAT6BQ8WYB5 2073 aa7.99□□□□□ -1.13
RN7SL561P-201ENST00000488553 BTAF1O14981 1849 aa7.99□□□□□ -1.13
RN7SL561P-201ENST00000488553 WTIPA6NIX2 430 aaPredicted RBP7.99□□□□□ -1.13
RN7SL561P-201ENST00000488553 PATL2C9JE40 543 aaKnown RBP7.99□□□□□ -1.13
RN7SL561P-201ENST00000488553 ZNF213O14771 459 aa7.99□□□□□ -1.13
RN7SL561P-201ENST00000488553 PFKFB2O60825 505 aa7.99□□□□□ -1.13
RN7SL561P-201ENST00000488553 EVCP57679 992 aa7.99□□□□□ -1.13
RN7SL561P-201ENST00000488553 MAP3K12Q12852 859 aa7.99□□□□□ -1.13
RN7SL561P-201ENST00000488553 NFIXQ14938 502 aa7.99□□□□□ -1.13
RN7SL561P-201ENST00000488553 FBXO33Q7Z6M2 555 aa7.99□□□□□ -1.13
RN7SL561P-201ENST00000488553 ZNF274Q96GC6 653 aaPredicted RBP7.99□□□□□ -1.13
RN7SL561P-201ENST00000488553 CHAMP1Q96JM3 812 aa7.99□□□□□ -1.13
RN7SL561P-201ENST00000488553 FAM84BQ96KN1 310 aaPredicted RBP7.99□□□□□ -1.13
RN7SL561P-201ENST00000488553 ANKRD2Q9GZV1 360 aa7.99□□□□□ -1.13
RN7SL561P-201ENST00000488553 GNL3LQ9NVN8 582 aaKnown RBP7.99□□□□□ -1.13
RN7SL561P-201ENST00000488553 WWC3Q9ULE0 1092 aa7.99□□□□□ -1.13
RN7SL561P-201ENST00000488553 MTMR6Q9Y217 621 aa7.99□□□□□ -1.13
RN7SL561P-201ENST00000488553 DDX49Q9Y6V7 483 aaKnown RBP7.99□□□□□ -1.13
RN7SL561P-201ENST00000488553 MYH3P11055 1940 aa7.98□□□□□ -1.13
RN7SL561P-201ENST00000488553 F13A1P00488 732 aa7.98□□□□□ -1.13
RN7SL561P-201ENST00000488553 PDCP20941 246 aa7.98□□□□□ -1.13
RN7SL561P-201ENST00000488553 HMGB2P26583 209 aaKnown RBP7.98□□□□□ -1.13
RN7SL561P-201ENST00000488553 GYG1P46976 350 aa7.98□□□□□ -1.13
RN7SL561P-201ENST00000488553 LARP1BQ659C4 914 aaKnown RBP7.98□□□□□ -1.13
RN7SL561P-201ENST00000488553 PROM2Q8N271 834 aa7.98□□□□□ -1.13
RN7SL561P-201ENST00000488553 MAGEB6Q8N7X4 407 aa7.98□□□□□ -1.13
RN7SL561P-201ENST00000488553 TMEM87AQ8NBN3 555 aa7.98□□□□□ -1.13
RN7SL561P-201ENST00000488553 BRF1Q92994 677 aa7.98□□□□□ -1.13
RN7SL561P-201ENST00000488553 GTF3C6Q969F1 213 aa7.98□□□□□ -1.13
RN7SL561P-201ENST00000488553 CHMP4CQ96CF2 233 aa7.98□□□□□ -1.13
RN7SL561P-201ENST00000488553 LLPHQ9BRT6 129 aaKnown RBP7.98□□□□□ -1.13
RN7SL561P-201ENST00000488553 ISY1Q9ULR0 285 aaKnown RBP7.98□□□□□ -1.13
RN7SL561P-201ENST00000488553 COL4A1P02462 1669 aa7.98□□□□□ -1.13
RN7SL561P-201ENST00000488553 WDR19Q8NEZ3 1342 aa7.98□□□□□ -1.13
RN7SL561P-201ENST00000488553 LAMB2P55268 1798 aa7.97□□□□□ -1.13
RN7SL561P-201ENST00000488553 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.97□□□□□ -1.13
RN7SL561P-201ENST00000488553 GOLGA6L3A6NEY3 463 aa7.97□□□□□ -1.13
RN7SL561P-201ENST00000488553 SEMA3EO15041 775 aa7.97□□□□□ -1.13
RN7SL561P-201ENST00000488553 PHF14O94880 888 aa7.97□□□□□ -1.13
RN7SL561P-201ENST00000488553 GYS1P13807 737 aa7.97□□□□□ -1.13
RN7SL561P-201ENST00000488553 PDIA3P30101 505 aaKnown RBP7.97□□□□□ -1.13
RN7SL561P-201ENST00000488553 MCM5P33992 734 aa7.97□□□□□ -1.13
RN7SL561P-201ENST00000488553 HAND2P61296 217 aa7.97□□□□□ -1.13
RN7SL561P-201ENST00000488553 APOBRQ0VD83 1088 aa7.97□□□□□ -1.13
RN7SL561P-201ENST00000488553 SCRN1Q12765 414 aa7.97□□□□□ -1.13
RN7SL561P-201ENST00000488553 STK3Q13188 491 aa7.97□□□□□ -1.13
RN7SL561P-201ENST00000488553 CAVIN4Q5BKX8 364 aa7.97□□□□□ -1.13
RN7SL561P-201ENST00000488553 L1TD1Q5T7N2 865 aaKnown RBP7.97□□□□□ -1.13
RN7SL561P-201ENST00000488553 USP48Q86UV5 1035 aa7.97□□□□□ -1.13
RN7SL561P-201ENST00000488553 MB21D2Q8IYB1 491 aaPredicted RBP7.97□□□□□ -1.13
RN7SL561P-201ENST00000488553 IFNL3Q8IZI9 196 aa7.97□□□□□ -1.13
RN7SL561P-201ENST00000488553 CCDC24Q8N4L8 307 aa7.97□□□□□ -1.13
RN7SL561P-201ENST00000488553 NCOA7Q8NI08 942 aa7.97□□□□□ -1.13
RN7SL561P-201ENST00000488553 SMARCC2Q8TAQ2 1214 aa7.97□□□□□ -1.13
RN7SL561P-201ENST00000488553 GPT2Q8TD30 523 aa7.97□□□□□ -1.13
RN7SL561P-201ENST00000488553 AIDAQ96BJ3 306 aa7.97□□□□□ -1.13
RN7SL561P-201ENST00000488553 LRRC2Q9BYS8 371 aa7.97□□□□□ -1.13
RN7SL561P-201ENST00000488553 NBPF3Q9H094 633 aa7.97□□□□□ -1.13
RN7SL561P-201ENST00000488553 ATP6V1DQ9Y5K8 247 aa7.97□□□□□ -1.13
RN7SL561P-201ENST00000488553 SCN7AQ01118 1682 aa7.97□□□□□ -1.13
RN7SL561P-201ENST00000488553 AKAP11Q9UKA4 1901 aa7.97□□□□□ -1.13
RN7SL561P-201ENST00000488553 LY75O60449 1722 aa7.97□□□□□ -1.13
RN7SL561P-201ENST00000488553 ZMYM6O95789 1325 aa7.97□□□□□ -1.13
RN7SL561P-201ENST00000488553 PDS5AQ29RF7 1337 aaKnown RBP7.97□□□□□ -1.13
RN7SL561P-201ENST00000488553 PNPLA7Q6ZV29 1317 aa7.97□□□□□ -1.13
RN7SL561P-201ENST00000488553 CARMIL3Q8ND23 1372 aa7.97□□□□□ -1.13
RN7SL561P-201ENST00000488553 C4BP0C0L5 1744 aa7.96□□□□□ -1.14
RN7SL561P-201ENST00000488553 ARAP2Q8WZ64 1704 aa7.96□□□□□ -1.14
RN7SL561P-201ENST00000488553 GSG1L2A8MUP6 293 aa7.96□□□□□ -1.14
RN7SL561P-201ENST00000488553 PRC1O43663 620 aa7.96□□□□□ -1.14
RN7SL561P-201ENST00000488553 DTNBO60941 627 aa7.96□□□□□ -1.14
RN7SL561P-201ENST00000488553 TRIM37O94972 964 aa7.96□□□□□ -1.14
RN7SL561P-201ENST00000488553 MBD4O95243 580 aa7.96□□□□□ -1.14
RN7SL561P-201ENST00000488553 CTDNEP1O95476 244 aa7.96□□□□□ -1.14
RN7SL561P-201ENST00000488553 APPP05067 770 aa7.96□□□□□ -1.14
RN7SL561P-201ENST00000488553 GNAT2P19087 354 aa7.96□□□□□ -1.14
RN7SL561P-201ENST00000488553 ANTXR2P58335 489 aa7.96□□□□□ -1.14
RN7SL561P-201ENST00000488553 RBM6P78332 1123 aaKnown RBP7.96□□□□□ -1.14
RN7SL561P-201ENST00000488553 FGD1P98174 961 aa7.96□□□□□ -1.14
RN7SL561P-201ENST00000488553 CHST3Q7LGC8 479 aa7.96□□□□□ -1.14
RN7SL561P-201ENST00000488553 ARMT1Q9H993 441 aa7.96□□□□□ -1.14
RN7SL561P-201ENST00000488553 LRP2BPQ9P2M1 347 aa7.96□□□□□ -1.14
RN7SL561P-201ENST00000488553 DENND2AQ9ULE3 1009 aa7.96□□□□□ -1.14
RN7SL561P-201ENST00000488553 IRS2Q9Y4H2 1338 aa7.96□□□□□ -1.14
RN7SL561P-201ENST00000488553 PLSCR1O15162 318 aa7.95□□□□□ -1.14
RN7SL561P-201ENST00000488553 JAK2O60674 1132 aa7.95□□□□□ -1.14
RN7SL561P-201ENST00000488553 MBD3O95983 291 aa7.95□□□□□ -1.14
RN7SL561P-201ENST00000488553 SERPINB2P05120 415 aa7.95□□□□□ -1.14
RN7SL561P-201ENST00000488553 XRCC6P12956 609 aaKnown RBP eCLIP7.95□□□□□ -1.14
RN7SL561P-201ENST00000488553 NCLP19338 710 aaKnown RBP7.95□□□□□ -1.14
RN7SL561P-201ENST00000488553 CYP7A1P22680 504 aa7.95□□□□□ -1.14
RN7SL561P-201ENST00000488553 HIBADHP31937 336 aaKnown RBP7.95□□□□□ -1.14
RN7SL561P-201ENST00000488553 MRE11P49959 708 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms