RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 IGF2-ASQ6U949 168 aa5.64□□□□□ -1.51
RBM28-207ENST00000488249 KLHL23Q8NBE8 558 aa5.64□□□□□ -1.51
RBM28-207ENST00000488249 GALNT11Q8NCW6 608 aa5.64□□□□□ -1.51
RBM28-207ENST00000488249 WNT8BQ93098 351 aa5.64□□□□□ -1.51
RBM28-207ENST00000488249 SETDB2Q96T68 719 aa5.64□□□□□ -1.51
RBM28-207ENST00000488249 CARD10Q9BWT7 1032 aa5.64□□□□□ -1.51
RBM28-207ENST00000488249 TRAK1Q9UPV9 953 aa5.64□□□□□ -1.51
RBM28-207ENST00000488249 SOX1O00570 391 aaPredicted RBP5.63□□□□□ -1.51
RBM28-207ENST00000488249 LDHBP07195 334 aaKnown RBP5.63□□□□□ -1.51
RBM28-207ENST00000488249 CD68P34810 354 aaPredicted RBP5.63□□□□□ -1.51
RBM28-207ENST00000488249 NRG1Q02297 640 aaPredicted RBP5.63□□□□□ -1.51
RBM28-207ENST00000488249 IKBKEQ14164 716 aa5.63□□□□□ -1.51
RBM28-207ENST00000488249 NPAS4Q8IUM7 802 aa5.63□□□□□ -1.51
RBM28-207ENST00000488249 GLIS3Q8NEA6 775 aa5.63□□□□□ -1.51
RBM28-207ENST00000488249 KLHDC7BQ96G42 594 aa5.63□□□□□ -1.51
RBM28-207ENST00000488249 BCO2Q9BYV7 579 aa5.63□□□□□ -1.51
RBM28-207ENST00000488249 ABCB6Q9NP58 842 aa5.63□□□□□ -1.51
RBM28-207ENST00000488249 OSGEPQ9NPF4 335 aa5.63□□□□□ -1.51
RBM28-207ENST00000488249 SEC31BQ9NQW1 1179 aa5.63□□□□□ -1.51
RBM28-207ENST00000488249 PPP4R2Q9NY27 417 aa5.63□□□□□ -1.51
RBM28-207ENST00000488249 TMEM238LA0A1B0GVL6 79 aa5.62□□□□□ -1.51
RBM28-207ENST00000488249 IGHA1P01876 353 aa5.62□□□□□ -1.51
RBM28-207ENST00000488249 ESRRAP11474 423 aaPredicted RBP5.62□□□□□ -1.51
RBM28-207ENST00000488249 ERCC3P19447 782 aa5.62□□□□□ -1.51
RBM28-207ENST00000488249 ITPKAP23677 461 aa5.62□□□□□ -1.51
RBM28-207ENST00000488249 ARL4DP49703 201 aa5.62□□□□□ -1.51
RBM28-207ENST00000488249 ADGRE1Q14246 886 aa5.62□□□□□ -1.51
RBM28-207ENST00000488249 FOXD4L6Q3SYB3 417 aaPredicted RBP5.62□□□□□ -1.51
RBM28-207ENST00000488249 EAPPQ56P03 285 aaPredicted RBP5.62□□□□□ -1.51
RBM28-207ENST00000488249 TMCO4Q5TGY1 634 aa5.62□□□□□ -1.51
RBM28-207ENST00000488249 HGSNATQ68CP4 663 aa5.62□□□□□ -1.51
RBM28-207ENST00000488249 GPAT2Q6NUI2 795 aa5.62□□□□□ -1.51
RBM28-207ENST00000488249 FOXD4L3Q6VB84 417 aaPredicted RBP5.62□□□□□ -1.51
RBM28-207ENST00000488249 SLC7A3Q8WY07 619 aa5.62□□□□□ -1.51
RBM28-207ENST00000488249 CLEC4MQ9H2X3 399 aaPredicted RBP5.62□□□□□ -1.51
RBM28-207ENST00000488249 USP21Q9UK80 565 aa5.62□□□□□ -1.51
RBM28-207ENST00000488249 MSTNO14793 375 aa5.61□□□□□ -1.51
RBM28-207ENST00000488249 GATA4P43694 442 aa5.61□□□□□ -1.51
RBM28-207ENST00000488249 FGD1P98174 961 aa5.61□□□□□ -1.51
RBM28-207ENST00000488249 PTPN12Q05209 780 aaKnown RBP5.61□□□□□ -1.51
RBM28-207ENST00000488249 PCDH1Q08174 1060 aa5.61□□□□□ -1.51
RBM28-207ENST00000488249 C19orf57Q0VDD7 668 aa5.61□□□□□ -1.51
RBM28-207ENST00000488249 TRIM26Q12899 539 aaPredicted RBP5.61□□□□□ -1.51
RBM28-207ENST00000488249 MBTPS1Q14703 1052 aa5.61□□□□□ -1.51
RBM28-207ENST00000488249 SUZ12Q15022 739 aaKnown RBP5.61□□□□□ -1.51
RBM28-207ENST00000488249 ZNF423Q2M1K9 1284 aa5.61□□□□□ -1.51
RBM28-207ENST00000488249 NXPE4Q6UWF7 544 aa5.61□□□□□ -1.51
RBM28-207ENST00000488249 SPOCK3Q9BQ16 436 aa5.61□□□□□ -1.51
RBM28-207ENST00000488249 MRPL18Q9H0U6 180 aaKnown RBP5.61□□□□□ -1.51
RBM28-207ENST00000488249 ZNF576Q9H609 170 aa5.61□□□□□ -1.51
RBM28-207ENST00000488249 SOX17Q9H6I2 414 aaPredicted RBP5.61□□□□□ -1.51
RBM28-207ENST00000488249 KCNK4Q9NYG8 393 aa5.61□□□□□ -1.51
RBM28-207ENST00000488249 GIPC1O14908 333 aa5.6□□□□□ -1.51
RBM28-207ENST00000488249 DDX3YO15523 660 aaKnown RBP5.6□□□□□ -1.51
RBM28-207ENST00000488249 PRPF40AO75400 957 aaKnown RBP5.6□□□□□ -1.51
RBM28-207ENST00000488249 PROCP04070 461 aa5.6□□□□□ -1.51
RBM28-207ENST00000488249 FCGRTP55899 365 aa5.6□□□□□ -1.51
RBM28-207ENST00000488249 DTHD1Q6ZMT9 781 aa5.6□□□□□ -1.51
RBM28-207ENST00000488249 TMEM130Q8N3G9 435 aa5.6□□□□□ -1.51
RBM28-207ENST00000488249 OSBPL7Q9BZF2 842 aa5.6□□□□□ -1.51
RBM28-207ENST00000488249 SPG7Q9UQ90 795 aa5.6□□□□□ -1.51
RBM28-207ENST00000488249 ADAM11O75078 769 aa5.59□□□□□ -1.51
RBM28-207ENST00000488249 XRCC5P13010 732 aaKnown RBP5.59□□□□□ -1.51
RBM28-207ENST00000488249 NLRP12P59046 1061 aa5.59□□□□□ -1.51
RBM28-207ENST00000488249 DUOXA2Q1HG44 320 aa5.59□□□□□ -1.51
RBM28-207ENST00000488249 RPS26P11Q5JNZ5 115 aaPredicted RBP5.59□□□□□ -1.51
RBM28-207ENST00000488249 TXNRD3Q86VQ6 643 aa5.59□□□□□ -1.51
RBM28-207ENST00000488249 WFDC12Q8WWY7 111 aa5.59□□□□□ -1.51
RBM28-207ENST00000488249 FOXD4L4Q8WXT5 416 aaPredicted RBP5.59□□□□□ -1.51
RBM28-207ENST00000488249 FRMD6Q96NE9 622 aa5.59□□□□□ -1.51
RBM28-207ENST00000488249 SRCIN1Q9C0H9 1055 aa5.59□□□□□ -1.51
RBM28-207ENST00000488249 ZFYVE1Q9HBF4 777 aa5.59□□□□□ -1.51
RBM28-207ENST00000488249 F8W735 103 aaPredicted RBP5.58□□□□□ -1.52
RBM28-207ENST00000488249 EIF4EBP3O60516 100 aaPredicted RBP5.58□□□□□ -1.52
RBM28-207ENST00000488249 WISP1O95388 367 aa5.58□□□□□ -1.52
RBM28-207ENST00000488249 B3GALT4O96024 378 aa5.58□□□□□ -1.52
RBM28-207ENST00000488249 NOS3P29474 1203 aa5.58□□□□□ -1.52
RBM28-207ENST00000488249 GNA15P30679 374 aa5.58□□□□□ -1.52
RBM28-207ENST00000488249 IREB2P48200 963 aaKnown RBP5.58□□□□□ -1.52
RBM28-207ENST00000488249 GSTM4Q03013 218 aa5.58□□□□□ -1.52
RBM28-207ENST00000488249 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.58□□□□□ -1.52
RBM28-207ENST00000488249 FBXO33Q7Z6M2 555 aa5.58□□□□□ -1.52
RBM28-207ENST00000488249 DUSP9Q99956 384 aaKnown RBP5.58□□□□□ -1.52
RBM28-207ENST00000488249 AKTIPQ9H8T0 292 aa5.58□□□□□ -1.52
RBM28-207ENST00000488249 ALX3O95076 343 aa5.57□□□□□ -1.52
RBM28-207ENST00000488249 GSTT1P30711 240 aa5.57□□□□□ -1.52
RBM28-207ENST00000488249 MFAP1P55081 439 aaKnown RBP5.57□□□□□ -1.52
RBM28-207ENST00000488249 FAAP100Q0VG06 881 aa5.57□□□□□ -1.52
RBM28-207ENST00000488249 KIAA1211Q6ZU35 1233 aa5.57□□□□□ -1.52
RBM28-207ENST00000488249 ACAD11Q709F0 780 aa5.57□□□□□ -1.52
RBM28-207ENST00000488249 AGGF1Q8N302 714 aaeCLIP5.57□□□□□ -1.52
RBM28-207ENST00000488249 C3orf58Q8NDZ4 430 aa5.57□□□□□ -1.52
RBM28-207ENST00000488249 DDX54Q8TDD1 881 aaKnown RBP5.57□□□□□ -1.52
RBM28-207ENST00000488249 UBASH3BQ8TF42 649 aa5.57□□□□□ -1.52
RBM28-207ENST00000488249 C12orf49Q9H741 205 aa5.57□□□□□ -1.52
RBM28-207ENST00000488249 RNF19AQ9NV58 838 aa5.57□□□□□ -1.52
RBM28-207ENST00000488249 AKAP2Q9Y2D5 859 aa5.57□□□□□ -1.52
RBM28-207ENST00000488249 USP26Q9BXU7 913 aa5.56□□□□□ -1.52
RBM28-207ENST00000488249 NRSN2Q9GZP1 204 aa5.56□□□□□ -1.52
RBM28-207ENST00000488249 FAM8A1Q9UBU6 413 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms