RNA–Protein interactions for RNA: ENST00000488214.1

PDAP1-203, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-203ENST00000488214 LSG1Q9H089 658 aaKnown RBP8.33□□□□□ -1.08
PDAP1-203ENST00000488214 WWC3Q9ULE0 1092 aa8.33□□□□□ -1.08
PDAP1-203ENST00000488214 ATF5Q9Y2D1 282 aaPredicted RBP8.33□□□□□ -1.08
PDAP1-203ENST00000488214 LEMD3Q9Y2U8 911 aa8.33□□□□□ -1.08
PDAP1-203ENST00000488214 ATP6V0A2Q9Y487 856 aa8.33□□□□□ -1.08
PDAP1-203ENST00000488214 BAZ2AQ9UIF9 1905 aaKnown RBP8.33□□□□□ -1.08
PDAP1-203ENST00000488214 IRS2Q9Y4H2 1338 aa8.32□□□□□ -1.08
PDAP1-203ENST00000488214 TIAM2Q8IVF5 1701 aa8.32□□□□□ -1.08
PDAP1-203ENST00000488214 ARFGEF1Q9Y6D6 1849 aa8.32□□□□□ -1.08
PDAP1-203ENST00000488214 M0R2C6 588 aa8.32□□□□□ -1.08
PDAP1-203ENST00000488214 ZFYP08048 801 aaPredicted RBP8.32□□□□□ -1.08
PDAP1-203ENST00000488214 PDE6AP16499 860 aa8.32□□□□□ -1.08
PDAP1-203ENST00000488214 HIBADHP31937 336 aaKnown RBP8.32□□□□□ -1.08
PDAP1-203ENST00000488214 ZMYM1Q5SVZ6 1142 aa8.32□□□□□ -1.08
PDAP1-203ENST00000488214 ZSCAN25Q6NSZ9 544 aa8.32□□□□□ -1.08
PDAP1-203ENST00000488214 OLFM4Q6UX06 510 aa8.32□□□□□ -1.08
PDAP1-203ENST00000488214 TXNRD3Q86VQ6 643 aa8.32□□□□□ -1.08
PDAP1-203ENST00000488214 SP8Q8IXZ3 490 aa8.32□□□□□ -1.08
PDAP1-203ENST00000488214 KLHL34Q8N239 644 aa8.32□□□□□ -1.08
PDAP1-203ENST00000488214 CNKSR2Q8WXI2 1034 aa8.32□□□□□ -1.08
PDAP1-203ENST00000488214 FAM84BQ96KN1 310 aaPredicted RBP8.32□□□□□ -1.08
PDAP1-203ENST00000488214 IPO9Q96P70 1041 aaKnown RBP8.32□□□□□ -1.08
PDAP1-203ENST00000488214 TMX4Q9H1E5 349 aaPredicted RBP8.32□□□□□ -1.08
PDAP1-203ENST00000488214 HELLSQ9NRZ9 838 aa8.32□□□□□ -1.08
PDAP1-203ENST00000488214 ZNF219Q9P2Y4 722 aaPredicted RBP8.32□□□□□ -1.08
PDAP1-203ENST00000488214 DENND2AQ9ULE3 1009 aa8.32□□□□□ -1.08
PDAP1-203ENST00000488214 JAG2Q9Y219 1238 aa8.32□□□□□ -1.08
PDAP1-203ENST00000488214 FER1L6Q2WGJ9 1857 aa8.32□□□□□ -1.08
PDAP1-203ENST00000488214 SCN9AQ15858 1988 aa8.31□□□□□ -1.08
PDAP1-203ENST00000488214 PDS5AQ29RF7 1337 aaKnown RBP8.31□□□□□ -1.08
PDAP1-203ENST00000488214 FOCADQ5VW36 1801 aa8.31□□□□□ -1.08
PDAP1-203ENST00000488214 ECM29Q5VYK3 1845 aa8.31□□□□□ -1.08
PDAP1-203ENST00000488214 C6orf229H3BNL8 230 aa8.31□□□□□ -1.08
PDAP1-203ENST00000488214 SEMA3EO15041 775 aa8.31□□□□□ -1.08
PDAP1-203ENST00000488214 ADD2P35612 726 aa8.31□□□□□ -1.08
PDAP1-203ENST00000488214 PTH1RQ03431 593 aa8.31□□□□□ -1.08
PDAP1-203ENST00000488214 MAP3K12Q12852 859 aa8.31□□□□□ -1.08
PDAP1-203ENST00000488214 BECN1Q14457 450 aa8.31□□□□□ -1.08
PDAP1-203ENST00000488214 MCMDC2Q4G0Z9 681 aa8.31□□□□□ -1.08
PDAP1-203ENST00000488214 SLC9C2Q5TAH2 1124 aa8.31□□□□□ -1.08
PDAP1-203ENST00000488214 DPP8Q6V1X1 898 aaPredicted RBP8.31□□□□□ -1.08
PDAP1-203ENST00000488214 FBXO33Q7Z6M2 555 aa8.31□□□□□ -1.08
PDAP1-203ENST00000488214 MAGEB6Q8N7X4 407 aa8.31□□□□□ -1.08
PDAP1-203ENST00000488214 TBC1D16Q8TBP0 767 aa8.31□□□□□ -1.08
PDAP1-203ENST00000488214 APPBP2Q92624 585 aa8.31□□□□□ -1.08
PDAP1-203ENST00000488214 CNKSR1Q969H4 720 aa8.31□□□□□ -1.08
PDAP1-203ENST00000488214 PODXL2Q9NZ53 605 aa8.31□□□□□ -1.08
PDAP1-203ENST00000488214 LRP2BPQ9P2M1 347 aa8.31□□□□□ -1.08
PDAP1-203ENST00000488214 DAXXQ9UER7 740 aaPredicted RBP8.31□□□□□ -1.08
PDAP1-203ENST00000488214 ABCF2Q9UG63 623 aa8.31□□□□□ -1.08
PDAP1-203ENST00000488214 PALD1Q9ULE6 856 aa8.31□□□□□ -1.08
PDAP1-203ENST00000488214 RBM8AQ9Y5S9 174 aaKnown RBP8.31□□□□□ -1.08
PDAP1-203ENST00000488214 ZNF532Q9HCE3 1301 aa8.3□□□□□ -1.08
PDAP1-203ENST00000488214 DDX60LQ5H9U9 1706 aaKnown RBP8.3□□□□□ -1.08
PDAP1-203ENST00000488214 EPB41L2O43491 1005 aaKnown RBP8.3□□□□□ -1.08
PDAP1-203ENST00000488214 HSPA4P34932 840 aa8.3□□□□□ -1.08
PDAP1-203ENST00000488214 RABEP1Q15276 862 aa8.3□□□□□ -1.08
PDAP1-203ENST00000488214 C15orf52Q6ZUT6 534 aaKnown RBP8.3□□□□□ -1.08
PDAP1-203ENST00000488214 TICAM2Q86XR7 235 aa8.3□□□□□ -1.08
PDAP1-203ENST00000488214 HSCBQ8IWL3 235 aa8.3□□□□□ -1.08
PDAP1-203ENST00000488214 MPNDQ8N594 471 aa8.3□□□□□ -1.08
PDAP1-203ENST00000488214 OSBP2Q969R2 916 aa8.3□□□□□ -1.08
PDAP1-203ENST00000488214 RAI14Q9P0K7 980 aa8.3□□□□□ -1.08
PDAP1-203ENST00000488214 PPP1R1BQ9UD71 204 aaPredicted RBP8.3□□□□□ -1.08
PDAP1-203ENST00000488214 POLLQ9UGP5 575 aa8.3□□□□□ -1.08
PDAP1-203ENST00000488214 SNED1Q8TER0 1413 aa8.29□□□□□ -1.08
PDAP1-203ENST00000488214 RIMBP2O15034 1052 aa8.29□□□□□ -1.08
PDAP1-203ENST00000488214 GPAA1O43292 621 aa8.29□□□□□ -1.08
PDAP1-203ENST00000488214 MBD4O95243 580 aa8.29□□□□□ -1.08
PDAP1-203ENST00000488214 DPEP1P16444 411 aa8.29□□□□□ -1.08
PDAP1-203ENST00000488214 ANAPC15P60006 121 aa8.29□□□□□ -1.08
PDAP1-203ENST00000488214 UBE3CQ15386 1083 aa8.29□□□□□ -1.08
PDAP1-203ENST00000488214 FBXW7Q969H0 707 aa8.29□□□□□ -1.08
PDAP1-203ENST00000488214 AIDAQ96BJ3 306 aa8.29□□□□□ -1.08
PDAP1-203ENST00000488214 KIF2CQ99661 725 aa8.29□□□□□ -1.08
PDAP1-203ENST00000488214 PUS7LQ9H0K6 701 aaKnown RBP8.29□□□□□ -1.08
PDAP1-203ENST00000488214 MYH8P13535 1937 aa8.29□□□□□ -1.08
PDAP1-203ENST00000488214 A0A0G2JLW4 131 aa8.28□□□□□ -1.08
PDAP1-203ENST00000488214 TCRBV5S4A2TA0A5A2 114 aa8.28□□□□□ -1.08
PDAP1-203ENST00000488214 SLC27A2O14975 620 aa8.28□□□□□ -1.08
PDAP1-203ENST00000488214 CYP7A1P22680 504 aa8.28□□□□□ -1.08
PDAP1-203ENST00000488214 SLC4A3P48751 1232 aa8.28□□□□□ -1.08
PDAP1-203ENST00000488214 VPS53Q5VIR6 699 aa8.28□□□□□ -1.08
PDAP1-203ENST00000488214 RNF20Q5VTR2 975 aa8.28□□□□□ -1.08
PDAP1-203ENST00000488214 CREB3L3Q68CJ9 461 aa8.28□□□□□ -1.08
PDAP1-203ENST00000488214 ERICH6Q7L0X2 663 aa8.28□□□□□ -1.08
PDAP1-203ENST00000488214 DZIP1Q86YF9 867 aaKnown RBP8.28□□□□□ -1.08
PDAP1-203ENST00000488214 ZGPATQ8N5A5 531 aaKnown RBP8.28□□□□□ -1.08
PDAP1-203ENST00000488214 TTLL6Q8N841 843 aa8.28□□□□□ -1.08
PDAP1-203ENST00000488214 MIGA1Q8NAN2 632 aa8.28□□□□□ -1.08
PDAP1-203ENST00000488214 TDRD7Q8NHU6 1098 aaKnown RBP8.28□□□□□ -1.08
PDAP1-203ENST00000488214 EYA3Q99504 573 aa8.28□□□□□ -1.08
PDAP1-203ENST00000488214 CD209Q9NNX6 404 aa8.28□□□□□ -1.08
PDAP1-203ENST00000488214 SNX14Q9Y5W7 946 aa8.28□□□□□ -1.08
PDAP1-203ENST00000488214 U3KPZ7 1027 aaPredicted RBP8.28□□□□□ -1.08
PDAP1-203ENST00000488214 MYH1P12882 1939 aa8.28□□□□□ -1.08
PDAP1-203ENST00000488214 SALL1Q9NSC2 1324 aa8.28□□□□□ -1.08
PDAP1-203ENST00000488214 RPAP1Q9BWH6 1393 aaPredicted RBP8.27□□□□□ -1.09
PDAP1-203ENST00000488214 G3V3G9 751 aa8.27□□□□□ -1.09
PDAP1-203ENST00000488214 C21orf2O43822 256 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms