RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 SLC5A1P13866 664 aa16.31■□□□□ 0.2
COPS7B-221ENST00000488111 C2CD5Q86YS7 1000 aa16.31■□□□□ 0.2
COPS7B-221ENST00000488111 ZNF622Q969S3 477 aaKnown RBP eCLIP16.31■□□□□ 0.2
COPS7B-221ENST00000488111 SNRKQ9NRH2 765 aa16.31■□□□□ 0.2
COPS7B-221ENST00000488111 MBD3O95983 291 aa16.31■□□□□ 0.2
COPS7B-221ENST00000488111 IFIT1P09914 478 aaKnown RBP16.31■□□□□ 0.2
COPS7B-221ENST00000488111 CHRNA5P30532 468 aa16.31■□□□□ 0.2
COPS7B-221ENST00000488111 PHKA1P46020 1223 aa16.31■□□□□ 0.2
COPS7B-221ENST00000488111 SCARF1Q14162 830 aa16.31■□□□□ 0.2
COPS7B-221ENST00000488111 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.31■□□□□ 0.28e-7■□□□□ 9.2
COPS7B-221ENST00000488111 ZNF710Q8N1W2 664 aa16.3■□□□□ 0.2
COPS7B-221ENST00000488111 CRAMP1Q96RY5 1269 aa16.3■□□□□ 0.2
COPS7B-221ENST00000488111 ANKRD31Q8N7Z5 1873 aa16.3■□□□□ 0.2
COPS7B-221ENST00000488111 NPR1P16066 1061 aa16.3■□□□□ 0.2
COPS7B-221ENST00000488111 KCNJ4P48050 445 aa16.3■□□□□ 0.2
COPS7B-221ENST00000488111 BCAMP50895 628 aa16.3■□□□□ 0.2
COPS7B-221ENST00000488111 CCDC102BQ68D86 513 aa16.3■□□□□ 0.2
COPS7B-221ENST00000488111 PI16Q6UXB8 463 aa16.3■□□□□ 0.2
COPS7B-221ENST00000488111 GTPBP4Q9BZE4 634 aaKnown RBP16.3■□□□□ 0.2
COPS7B-221ENST00000488111 ANKIB1Q9P2G1 1089 aa16.3■□□□□ 0.2
COPS7B-221ENST00000488111 NSFL1CQ9UNZ2 370 aaKnown RBP16.3■□□□□ 0.2
COPS7B-221ENST00000488111 A0A0U1RQG5 324 aaPredicted RBP16.29■□□□□ 0.2
COPS7B-221ENST00000488111 BBOX1O75936 387 aa16.29■□□□□ 0.2
COPS7B-221ENST00000488111 FKBP4Q02790 459 aaKnown RBP eCLIP16.29■□□□□ 0.2
COPS7B-221ENST00000488111 ZGPATQ8N5A5 531 aaKnown RBP16.29■□□□□ 0.2
COPS7B-221ENST00000488111 EVI5LQ96CN4 794 aa16.29■□□□□ 0.2
COPS7B-221ENST00000488111 HAUS7Q99871 368 aa16.29■□□□□ 0.2
COPS7B-221ENST00000488111 H0YIN7 160 aa16.29■□□□□ 0.2
COPS7B-221ENST00000488111 KLRK1P26718 216 aa16.29■□□□□ 0.2
COPS7B-221ENST00000488111 HMGN5P82970 282 aaKnown RBP16.29■□□□□ 0.2
COPS7B-221ENST00000488111 OLFM4Q6UX06 510 aa16.29■□□□□ 0.2
COPS7B-221ENST00000488111 MASTLQ96GX5 879 aa16.29■□□□□ 0.2
COPS7B-221ENST00000488111 ANKRD2Q9GZV1 360 aa16.29■□□□□ 0.2
COPS7B-221ENST00000488111 GOLIM4O00461 696 aa16.28■□□□□ 0.2
COPS7B-221ENST00000488111 CHMLP26374 656 aa16.28■□□□□ 0.2
COPS7B-221ENST00000488111 GYG1P46976 350 aa16.28■□□□□ 0.2
COPS7B-221ENST00000488111 UBE4AQ14139 1066 aa16.28■□□□□ 0.2
COPS7B-221ENST00000488111 PPEF1O14829 653 aaPredicted RBP16.28■□□□□ 0.2
COPS7B-221ENST00000488111 ST18O60284 1047 aa16.28■□□□□ 0.2
COPS7B-221ENST00000488111 GPSM2P81274 684 aa16.28■□□□□ 0.2
COPS7B-221ENST00000488111 GPR101Q96P66 508 aaPredicted RBP16.28■□□□□ 0.2
COPS7B-221ENST00000488111 MTFR1LQ9H019 292 aa16.28■□□□□ 0.2
COPS7B-221ENST00000488111 IQSEC3Q9UPP2 1182 aaPredicted RBP16.28■□□□□ 0.2
COPS7B-221ENST00000488111 MCAMP43121 646 aa16.27■□□□□ 0.2
COPS7B-221ENST00000488111 CASC1Q6TDU7 716 aa16.27■□□□□ 0.2
COPS7B-221ENST00000488111 PIBF1Q8WXW3 757 aa16.27■□□□□ 0.2
COPS7B-221ENST00000488111 FSD1Q9BTV5 496 aa16.27■□□□□ 0.2
COPS7B-221ENST00000488111 ZNF804BA4D1E1 1349 aa16.27■□□□□ 0.19
COPS7B-221ENST00000488111 GOLGB1Q14789 3259 aaKnown RBP16.27■□□□□ 0.19
COPS7B-221ENST00000488111 CHGBP05060 677 aa16.27■□□□□ 0.19
COPS7B-221ENST00000488111 PTMAP06454 111 aaKnown RBP16.27■□□□□ 0.19
COPS7B-221ENST00000488111 ALDH1B1P30837 517 aa16.27■□□□□ 0.19
COPS7B-221ENST00000488111 ZAP70P43403 619 aa16.27■□□□□ 0.19
COPS7B-221ENST00000488111 TSPY26PQ9H489 355 aa16.27■□□□□ 0.19
COPS7B-221ENST00000488111 PAG1Q9NWQ8 432 aa16.27■□□□□ 0.19
COPS7B-221ENST00000488111 ZNF219Q9P2Y4 722 aaPredicted RBP16.27■□□□□ 0.19
COPS7B-221ENST00000488111 KIF20AO95235 890 aa16.26■□□□□ 0.19
COPS7B-221ENST00000488111 TXNRD3Q86VQ6 643 aa16.26■□□□□ 0.19
COPS7B-221ENST00000488111 RNF214Q8ND24 703 aa16.26■□□□□ 0.19
COPS7B-221ENST00000488111 IL25Q9H293 177 aa16.26■□□□□ 0.19
COPS7B-221ENST00000488111 POLD1P28340 1107 aa16.25■□□□□ 0.19
COPS7B-221ENST00000488111 CWC27Q6UX04 472 aaKnown RBP16.25■□□□□ 0.19
COPS7B-221ENST00000488111 FAM84BQ96KN1 310 aaPredicted RBP16.25■□□□□ 0.19
COPS7B-221ENST00000488111 XDHP47989 1333 aa16.25■□□□□ 0.19
COPS7B-221ENST00000488111 A0A0G2JLW4 131 aa16.24■□□□□ 0.19
COPS7B-221ENST00000488111 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.24■□□□□ 0.19
COPS7B-221ENST00000488111 PPP1R1BQ9UD71 204 aaPredicted RBP16.24■□□□□ 0.19
COPS7B-221ENST00000488111 ATP6V0A2Q9Y487 856 aa16.24■□□□□ 0.19
COPS7B-221ENST00000488111 COL11A2P13942 1736 aaPredicted RBP16.24■□□□□ 0.19
COPS7B-221ENST00000488111 ARID4AP29374 1257 aaPredicted RBP16.24■□□□□ 0.19
COPS7B-221ENST00000488111 RASGRF1Q13972 1273 aa16.24■□□□□ 0.19
COPS7B-221ENST00000488111 SLFNL1Q499Z3 407 aa16.24■□□□□ 0.19
COPS7B-221ENST00000488111 CAVIN4Q5BKX8 364 aa16.24■□□□□ 0.19
COPS7B-221ENST00000488111 VPS37DQ86XT2 251 aa16.24■□□□□ 0.19
COPS7B-221ENST00000488111 SP8Q8IXZ3 490 aa16.24■□□□□ 0.19
COPS7B-221ENST00000488111 CHAMP1Q96JM3 812 aa16.24■□□□□ 0.19
COPS7B-221ENST00000488111 DIAPH3Q9NSV4 1193 aa16.24■□□□□ 0.19
COPS7B-221ENST00000488111 HMG20BQ9P0W2 317 aa16.24■□□□□ 0.19
COPS7B-221ENST00000488111 UFL1O94874 794 aa16.23■□□□□ 0.19
COPS7B-221ENST00000488111 UQCRFS1P1P0C7P4 283 aa16.23■□□□□ 0.19
COPS7B-221ENST00000488111 STYK1Q6J9G0 422 aa16.23■□□□□ 0.19
COPS7B-221ENST00000488111 ESYT1Q9BSJ8 1104 aa16.23■□□□□ 0.19
COPS7B-221ENST00000488111 WWC3Q9ULE0 1092 aa16.23■□□□□ 0.19
COPS7B-221ENST00000488111 LETM1O95202 739 aaPredicted RBP16.23■□□□□ 0.19
COPS7B-221ENST00000488111 FGD1P98174 961 aa16.23■□□□□ 0.19
COPS7B-221ENST00000488111 NOLC1Q14978 699 aaKnown RBP eCLIP16.23■□□□□ 0.19
COPS7B-221ENST00000488111 UVSSAQ2YD98 709 aa16.23■□□□□ 0.19
COPS7B-221ENST00000488111 DNTTIP2Q5QJE6 756 aaKnown RBP16.23■□□□□ 0.19
COPS7B-221ENST00000488111 PRPF40BQ6NWY9 871 aaKnown RBP16.23■□□□□ 0.19
COPS7B-221ENST00000488111 KLHL34Q8N239 644 aa16.23■□□□□ 0.19
COPS7B-221ENST00000488111 ZNF512BQ96KM6 892 aaPredicted RBP16.23■□□□□ 0.19
COPS7B-221ENST00000488111 FAM227BQ96M60 508 aa16.23■□□□□ 0.19
COPS7B-221ENST00000488111 POLLQ9UGP5 575 aa16.23■□□□□ 0.19
COPS7B-221ENST00000488111 LEMD3Q9Y2U8 911 aa16.23■□□□□ 0.19
COPS7B-221ENST00000488111 C10orf71Q711Q0 1435 aa16.23■□□□□ 0.19
COPS7B-221ENST00000488111 DPEP1P16444 411 aa16.22■□□□□ 0.19
COPS7B-221ENST00000488111 KBTBD3Q8NAB2 608 aa16.22■□□□□ 0.19
COPS7B-221ENST00000488111 SPATA5Q8NB90 893 aa16.22■□□□□ 0.19
COPS7B-221ENST00000488111 SPTLC3Q9NUV7 552 aa16.22■□□□□ 0.19
COPS7B-221ENST00000488111 GGA1Q9UJY5 639 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms