RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-223ENST00000486991 ATP2B4P23634 1241 aa16.34■□□□□ 0.21
NR1H3-223ENST00000486991 NBPF9Q3BBW0 867 aa16.34■□□□□ 0.21
NR1H3-223ENST00000486991 LMBR1LQ6UX01 489 aa16.34■□□□□ 0.21
NR1H3-223ENST00000486991 USP17L1Q7RTZ2 530 aa16.34■□□□□ 0.21
NR1H3-223ENST00000486991 TXNRD3Q86VQ6 643 aa16.34■□□□□ 0.21
NR1H3-223ENST00000486991 FBXW7Q969H0 707 aa16.34■□□□□ 0.21
NR1H3-223ENST00000486991 SUCLG2Q96I99 432 aa16.34■□□□□ 0.21
NR1H3-223ENST00000486991 C9orf78Q9NZ63 289 aaPredicted RBP16.34■□□□□ 0.21
NR1H3-223ENST00000486991 UBE2Q2LH0YL09 131 aa16.33■□□□□ 0.2
NR1H3-223ENST00000486991 KLRK1P26718 216 aa16.33■□□□□ 0.2
NR1H3-223ENST00000486991 RASAL3Q86YV0 1011 aa16.33■□□□□ 0.2
NR1H3-223ENST00000486991 EXOC6Q8TAG9 804 aa16.33■□□□□ 0.2
NR1H3-223ENST00000486991 IGHMBP2P38935 993 aaKnown RBP16.32■□□□□ 0.2
NR1H3-223ENST00000486991 RABL6Q3YEC7 729 aaPredicted RBP16.32■□□□□ 0.2
NR1H3-223ENST00000486991 ANKRD44Q8N8A2 993 aa16.32■□□□□ 0.2
NR1H3-223ENST00000486991 MEIS3Q99687 375 aa16.32■□□□□ 0.2
NR1H3-223ENST00000486991 USP44Q9H0E7 712 aa16.32■□□□□ 0.2
NR1H3-223ENST00000486991 ANKRD18BA2A2Z9 1011 aa16.31■□□□□ 0.2
NR1H3-223ENST00000486991 ZBTB7BO15156 539 aaPredicted RBP16.31■□□□□ 0.2
NR1H3-223ENST00000486991 CHRNDQ07001 517 aa16.31■□□□□ 0.2
NR1H3-223ENST00000486991 DACT2Q5SW24 774 aa16.31■□□□□ 0.2
NR1H3-223ENST00000486991 PODNQ7Z5L7 613 aa16.31■□□□□ 0.2
NR1H3-223ENST00000486991 ZNF594Q96JF6 807 aaPredicted RBP16.31■□□□□ 0.2
NR1H3-223ENST00000486991 CHMP4BQ9H444 224 aaKnown RBP16.31■□□□□ 0.2
NR1H3-223ENST00000486991 AKAP11Q9UKA4 1901 aa16.31■□□□□ 0.2
NR1H3-223ENST00000486991 SNAP23O00161 211 aa16.3■□□□□ 0.2
NR1H3-223ENST00000486991 GNAI3P08754 354 aa16.3■□□□□ 0.2
NR1H3-223ENST00000486991 UBTFL1P0CB47 393 aaPredicted RBP16.3■□□□□ 0.2
NR1H3-223ENST00000486991 SOX10P56693 466 aa16.3■□□□□ 0.2
NR1H3-223ENST00000486991 IFIT5Q13325 482 aaKnown RBP16.3■□□□□ 0.2
NR1H3-223ENST00000486991 BICC1Q9H694 974 aaKnown RBP16.3■□□□□ 0.2
NR1H3-223ENST00000486991 SAGE1Q9NXZ1 904 aa16.3■□□□□ 0.2
NR1H3-223ENST00000486991 SASH1O94885 1247 aa16.29■□□□□ 0.2
NR1H3-223ENST00000486991 MKRN3Q13064 507 aaKnown RBP16.29■□□□□ 0.2
NR1H3-223ENST00000486991 MPHOSPH8Q99549 860 aa16.29■□□□□ 0.2
NR1H3-223ENST00000486991 LEMD3Q9Y2U8 911 aa16.29■□□□□ 0.2
NR1H3-223ENST00000486991 ARAP2Q8WZ64 1704 aa16.28■□□□□ 0.2
NR1H3-223ENST00000486991 ZNF804BA4D1E1 1349 aa16.28■□□□□ 0.2
NR1H3-223ENST00000486991 WNT10BO00744 389 aa16.28■□□□□ 0.2
NR1H3-223ENST00000486991 PRKG1Q13976 671 aa16.28■□□□□ 0.2
NR1H3-223ENST00000486991 ANKRD2Q9GZV1 360 aa16.28■□□□□ 0.2
NR1H3-223ENST00000486991 C1orf115Q9H7X2 142 aa16.28■□□□□ 0.2
NR1H3-223ENST00000486991 CHMP3Q9Y3E7 222 aa16.28■□□□□ 0.2
NR1H3-223ENST00000486991 PAPPA2Q9BXP8 1791 aa16.28■□□□□ 0.2
NR1H3-223ENST00000486991 PITPNM2Q9BZ72 1349 aa16.27■□□□□ 0.2
NR1H3-223ENST00000486991 TAF5LO75529 589 aa16.27■□□□□ 0.2
NR1H3-223ENST00000486991 TBC1D8O95759 1140 aa16.27■□□□□ 0.2
NR1H3-223ENST00000486991 GNAI2P04899 355 aa16.27■□□□□ 0.2
NR1H3-223ENST00000486991 TTLL12Q14166 644 aaPredicted RBP16.27■□□□□ 0.2
NR1H3-223ENST00000486991 C15orf52Q6ZUT6 534 aaKnown RBP16.27■□□□□ 0.2
NR1H3-223ENST00000486991 HELBQ8NG08 1087 aaPredicted RBP16.27■□□□□ 0.2
NR1H3-223ENST00000486991 ZBTB40Q9NUA8 1239 aa16.27■□□□□ 0.2
NR1H3-223ENST00000486991 FZD1Q9UP38 647 aa16.27■□□□□ 0.2
NR1H3-223ENST00000486991 KIAA0825Q8IV33 1275 aa16.26■□□□□ 0.19
NR1H3-223ENST00000486991 PUS3Q9BZE2 481 aaKnown RBP16.26■□□□□ 0.19
NR1H3-223ENST00000486991 COA1Q9GZY4 146 aa16.26■□□□□ 0.19
NR1H3-223ENST00000486991 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.26■□□□□ 0.19
NR1H3-223ENST00000486991 HDAC5Q9UQL6 1122 aa16.26■□□□□ 0.19
NR1H3-223ENST00000486991 LRRFIP2Q9Y608 721 aaKnown RBP16.26■□□□□ 0.19
NR1H3-223ENST00000486991 ECM29Q5VYK3 1845 aa16.26■□□□□ 0.19
NR1H3-223ENST00000486991 SLC34A2O95436 690 aa16.25■□□□□ 0.19
NR1H3-223ENST00000486991 FKBP1BP68106 108 aa16.25■□□□□ 0.19
NR1H3-223ENST00000486991 GTF2IP78347 998 aa16.25■□□□□ 0.19
NR1H3-223ENST00000486991 CCDC57Q2TAC2 916 aa16.25■□□□□ 0.19
NR1H3-223ENST00000486991 STRIP1Q5VSL9 837 aa16.25■□□□□ 0.19
NR1H3-223ENST00000486991 TTLL5Q6EMB2 1281 aa16.25■□□□□ 0.19
NR1H3-223ENST00000486991 PCDHAC2Q9Y5I4 1007 aa16.25■□□□□ 0.19
NR1H3-223ENST00000486991 MYH13Q9UKX3 1938 aa16.24■□□□□ 0.19
NR1H3-223ENST00000486991 RFX5P48382 616 aaPredicted RBP16.24■□□□□ 0.19
NR1H3-223ENST00000486991 PTPN12Q05209 780 aaKnown RBP16.24■□□□□ 0.19
NR1H3-223ENST00000486991 LDHAL6AQ6ZMR3 332 aa16.24■□□□□ 0.19
NR1H3-223ENST00000486991 CTU1Q7Z7A3 348 aaKnown RBP16.24■□□□□ 0.19
NR1H3-223ENST00000486991 OGFOD1Q8N543 542 aa16.24■□□□□ 0.19
NR1H3-223ENST00000486991 RIPOR2Q9Y4F9 1068 aa16.24■□□□□ 0.19
NR1H3-223ENST00000486991 KCNJ4P48050 445 aa16.23■□□□□ 0.19
NR1H3-223ENST00000486991 AAMPQ13685 434 aa16.23■□□□□ 0.19
NR1H3-223ENST00000486991 VGLL2Q8N8G2 317 aa16.23■□□□□ 0.19
NR1H3-223ENST00000486991 KLHDC4Q8TBB5 520 aa16.23■□□□□ 0.19
NR1H3-223ENST00000486991 ZNF296Q8WUU4 475 aaPredicted RBP16.23■□□□□ 0.19
NR1H3-223ENST00000486991 R3HDMLQ9H3Y0 253 aa16.23■□□□□ 0.19
NR1H3-223ENST00000486991 LRRC24Q50LG9 513 aa16.22■□□□□ 0.19
NR1H3-223ENST00000486991 TAF7LQ5H9L4 462 aa16.22■□□□□ 0.19
NR1H3-223ENST00000486991 CERS5Q8N5B7 392 aa16.22■□□□□ 0.19
NR1H3-223ENST00000486991 ZBED3Q96IU2 234 aaPredicted RBP16.22■□□□□ 0.19
NR1H3-223ENST00000486991 CD209Q9NNX6 404 aa16.22■□□□□ 0.19
NR1H3-223ENST00000486991 CNNM1Q9NRU3 951 aa16.22■□□□□ 0.19
NR1H3-223ENST00000486991 JAG2Q9Y219 1238 aa16.22■□□□□ 0.19
NR1H3-223ENST00000486991 AOX1Q06278 1338 aa16.21■□□□□ 0.19
NR1H3-223ENST00000486991 HPS5Q9UPZ3 1129 aa16.21■□□□□ 0.19
NR1H3-223ENST00000486991 MYO3BQ8WXR4 1341 aa16.2■□□□□ 0.18
NR1H3-223ENST00000486991 F8W031 263 aaPredicted RBP16.2■□□□□ 0.18
NR1H3-223ENST00000486991 IL1R1P14778 569 aa16.2■□□□□ 0.18
NR1H3-223ENST00000486991 TM4SF4P48230 202 aa16.2■□□□□ 0.18
NR1H3-223ENST00000486991 MMP14P50281 582 aa16.2■□□□□ 0.18
NR1H3-223ENST00000486991 CEP85Q6P2H3 762 aa16.2■□□□□ 0.18
NR1H3-223ENST00000486991 REM2Q8IYK8 340 aaPredicted RBP16.2■□□□□ 0.18
NR1H3-223ENST00000486991 ANGEL1Q9UNK9 670 aaKnown RBP16.2■□□□□ 0.18
NR1H3-223ENST00000486991 PCDHB15Q9Y5E8 787 aa16.2■□□□□ 0.18
NR1H3-223ENST00000486991 NF2P35240 595 aa16.19■□□□□ 0.18
NR1H3-223ENST00000486991 UBE4AQ14139 1066 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms