RNA–Protein interactions for RNA: ENST00000485441.5

SRRM1-213, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-213ENST00000485441 PHC3Q8NDX5 983 aa8.14□□□□□ -1.11
SRRM1-213ENST00000485441 ASAP3Q8TDY4 903 aa8.14□□□□□ -1.11
SRRM1-213ENST00000485441 RHOVQ96L33 236 aa8.14□□□□□ -1.11
SRRM1-213ENST00000485441 COL25A1Q9BXS0 654 aaPredicted RBP8.14□□□□□ -1.11
SRRM1-213ENST00000485441 SMG9Q9H0W8 520 aaKnown RBP8.14□□□□□ -1.11
SRRM1-213ENST00000485441 RBSNQ9H1K0 784 aa8.14□□□□□ -1.11
SRRM1-213ENST00000485441 PAGE1O75459 146 aa8.13□□□□□ -1.11
SRRM1-213ENST00000485441 RLBP1P12271 317 aa8.13□□□□□ -1.11
SRRM1-213ENST00000485441 NFX1Q12986 1120 aaKnown RBP8.13□□□□□ -1.11
SRRM1-213ENST00000485441 PAK2Q13177 524 aa8.13□□□□□ -1.11
SRRM1-213ENST00000485441 PWP1Q13610 501 aa8.13□□□□□ -1.11
SRRM1-213ENST00000485441 C1orf229Q6ZS94 237 aaPredicted RBP8.13□□□□□ -1.11
SRRM1-213ENST00000485441 RASGRP4Q8TDF6 673 aa8.13□□□□□ -1.11
SRRM1-213ENST00000485441 CLEC4MQ9H2X3 399 aaPredicted RBP8.13□□□□□ -1.11
SRRM1-213ENST00000485441 NSFL1CQ9UNZ2 370 aaKnown RBP8.13□□□□□ -1.11
SRRM1-213ENST00000485441 TRIM33Q9UPN9 1127 aa8.13□□□□□ -1.11
SRRM1-213ENST00000485441 TERTO14746 1132 aaKnown RBP8.12□□□□□ -1.11
SRRM1-213ENST00000485441 GREM1O60565 184 aa8.12□□□□□ -1.11
SRRM1-213ENST00000485441 BMP6P22004 513 aa8.12□□□□□ -1.11
SRRM1-213ENST00000485441 LIG3P49916 1009 aa8.12□□□□□ -1.11
SRRM1-213ENST00000485441 SF3A1Q15459 793 aaKnown RBP8.12□□□□□ -1.11
SRRM1-213ENST00000485441 PSAPL1Q6NUJ1 521 aa8.12□□□□□ -1.11
SRRM1-213ENST00000485441 ELMSAN1Q6PJG2 1045 aa8.12□□□□□ -1.11
SRRM1-213ENST00000485441 ILDR2Q71H61 639 aa8.12□□□□□ -1.11
SRRM1-213ENST00000485441 PRKAG2Q9UGJ0 569 aa8.12□□□□□ -1.11
SRRM1-213ENST00000485441 INPP5FQ9Y2H2 1132 aa8.12□□□□□ -1.11
SRRM1-213ENST00000485441 MINDY4BA8MYZ0 360 aa8.11□□□□□ -1.11
SRRM1-213ENST00000485441 F6X3S4 739 aa8.11□□□□□ -1.11
SRRM1-213ENST00000485441 B3GALT4O96024 378 aa8.11□□□□□ -1.11
SRRM1-213ENST00000485441 GBP2P32456 591 aaPredicted RBP8.11□□□□□ -1.11
SRRM1-213ENST00000485441 EIF4A3P38919 411 aaKnown RBP8.11□□□□□ -1.11
SRRM1-213ENST00000485441 SRSF11Q05519 484 aaKnown RBP8.11□□□□□ -1.11
SRRM1-213ENST00000485441 AGMOQ6ZNB7 445 aa8.11□□□□□ -1.11
SRRM1-213ENST00000485441 SLCO4C1Q6ZQN7 724 aa8.11□□□□□ -1.11
SRRM1-213ENST00000485441 GOLGA6L1Q8N7Z2 621 aa8.11□□□□□ -1.11
SRRM1-213ENST00000485441 ACDQ96AP0 544 aa8.11□□□□□ -1.11
SRRM1-213ENST00000485441 EAF1Q96JC9 268 aaPredicted RBP8.11□□□□□ -1.11
SRRM1-213ENST00000485441 SH2B1Q9NRF2 756 aaPredicted RBP8.11□□□□□ -1.11
SRRM1-213ENST00000485441 TMEM39AQ9NV64 488 aa8.11□□□□□ -1.11
SRRM1-213ENST00000485441 TLR6Q9Y2C9 796 aa8.11□□□□□ -1.11
SRRM1-213ENST00000485441 ESRRAP11474 423 aaPredicted RBP8.1□□□□□ -1.11
SRRM1-213ENST00000485441 EPXP11678 715 aa8.1□□□□□ -1.11
SRRM1-213ENST00000485441 PTPRAP18433 802 aa8.1□□□□□ -1.11
SRRM1-213ENST00000485441 BAG6P46379 1132 aa8.1□□□□□ -1.11
SRRM1-213ENST00000485441 RPS26P62854 115 aaKnown RBP8.1□□□□□ -1.11
SRRM1-213ENST00000485441 LMNB2Q03252 620 aa8.1□□□□□ -1.11
SRRM1-213ENST00000485441 PCDH1Q08174 1060 aa8.1□□□□□ -1.11
SRRM1-213ENST00000485441 MAP3K11Q16584 847 aa8.1□□□□□ -1.11
SRRM1-213ENST00000485441 RASIP1Q5U651 963 aa8.1□□□□□ -1.11
SRRM1-213ENST00000485441 FBXL19Q6PCT2 694 aa8.1□□□□□ -1.11
SRRM1-213ENST00000485441 ZNF296Q8WUU4 475 aaPredicted RBP8.1□□□□□ -1.11
SRRM1-213ENST00000485441 UBXN4Q92575 508 aa8.1□□□□□ -1.11
SRRM1-213ENST00000485441 SPON2Q9BUD6 331 aa8.1□□□□□ -1.11
SRRM1-213ENST00000485441 GDF2Q9UK05 429 aaPredicted RBP8.1□□□□□ -1.11
SRRM1-213ENST00000485441 SOX1O00570 391 aaPredicted RBP8.09□□□□□ -1.11
SRRM1-213ENST00000485441 PF4P02776 101 aa8.09□□□□□ -1.11
SRRM1-213ENST00000485441 ATF4P18848 351 aaPredicted RBP8.09□□□□□ -1.11
SRRM1-213ENST00000485441 TFE3P19532 575 aaPredicted RBP8.09□□□□□ -1.11
SRRM1-213ENST00000485441 ZNF157P51786 506 aaPredicted RBP8.09□□□□□ -1.11
SRRM1-213ENST00000485441 GNL2Q13823 731 aaKnown RBP8.09□□□□□ -1.11
SRRM1-213ENST00000485441 ZNF787Q6DD87 383 aa8.09□□□□□ -1.11
SRRM1-213ENST00000485441 CACTIN-AS1Q8N1I8 211 aa8.09□□□□□ -1.11
SRRM1-213ENST00000485441 MICALL1Q8N3F8 863 aa8.09□□□□□ -1.11
SRRM1-213ENST00000485441 STK35Q8TDR2 534 aa8.09□□□□□ -1.11
SRRM1-213ENST00000485441 TANGO6Q9C0B7 1094 aa8.09□□□□□ -1.11
SRRM1-213ENST00000485441 ARID5AQ03989 594 aa8.08□□□□□ -1.12
SRRM1-213ENST00000485441 CAMK2GQ13555 558 aaPredicted RBP8.08□□□□□ -1.12
SRRM1-213ENST00000485441 TTBK2Q6IQ55 1244 aa8.08□□□□□ -1.12
SRRM1-213ENST00000485441 GPRASP2Q96D09 838 aa8.08□□□□□ -1.12
SRRM1-213ENST00000485441 NT5C1AQ9BXI3 368 aa8.08□□□□□ -1.12
SRRM1-213ENST00000485441 LACRTQ9GZZ8 138 aa8.08□□□□□ -1.12
SRRM1-213ENST00000485441 TM4SF5O14894 197 aa8.07□□□□□ -1.12
SRRM1-213ENST00000485441 RGS9O75916 674 aaPredicted RBP8.07□□□□□ -1.12
SRRM1-213ENST00000485441 FGRP09769 529 aa8.07□□□□□ -1.12
SRRM1-213ENST00000485441 EPHA1P21709 976 aa8.07□□□□□ -1.12
SRRM1-213ENST00000485441 ALAS2P22557 587 aa8.07□□□□□ -1.12
SRRM1-213ENST00000485441 CDC27P30260 824 aa8.07□□□□□ -1.12
SRRM1-213ENST00000485441 AFF1P51825 1210 aaKnown RBP8.07□□□□□ -1.12
SRRM1-213ENST00000485441 RBL2Q08999 1139 aa8.07□□□□□ -1.12
SRRM1-213ENST00000485441 LCE2CQ5TA81 110 aa8.07□□□□□ -1.12
SRRM1-213ENST00000485441 PCNX4Q63HM2 1172 aa8.07□□□□□ -1.12
SRRM1-213ENST00000485441 MCF2L2Q86YR7 1114 aa8.07□□□□□ -1.12
SRRM1-213ENST00000485441 KIAA0825Q8IV33 1275 aa8.07□□□□□ -1.12
SRRM1-213ENST00000485441 NUDT8Q8WV74 236 aa8.07□□□□□ -1.12
SRRM1-213ENST00000485441 GPN3Q9UHW5 284 aaPredicted RBP8.07□□□□□ -1.12
SRRM1-213ENST00000485441 ADAMTS2O95450 1211 aa8.06□□□□□ -1.12
SRRM1-213ENST00000485441 ALBP02768 609 aa8.06□□□□□ -1.12
SRRM1-213ENST00000485441 NME2P22392 152 aa8.06□□□□□ -1.12
SRRM1-213ENST00000485441 DNAJA1P31689 397 aaKnown RBP8.06□□□□□ -1.12
SRRM1-213ENST00000485441 COL9A3Q14050 684 aaPredicted RBP8.06□□□□□ -1.12
SRRM1-213ENST00000485441 HGSNATQ68CP4 663 aa8.06□□□□□ -1.12
SRRM1-213ENST00000485441 ARMC5Q96C12 935 aa8.06□□□□□ -1.12
SRRM1-213ENST00000485441 PCDHB5Q9Y5E4 795 aa8.06□□□□□ -1.12
SRRM1-213ENST00000485441 SLURP2P0DP57 97 aa8.05□□□□□ -1.12
SRRM1-213ENST00000485441 ATP2B1P20020 1258 aa8.05□□□□□ -1.12
SRRM1-213ENST00000485441 ARNTP27540 789 aa8.05□□□□□ -1.12
SRRM1-213ENST00000485441 FAM160A1Q05DH4 1040 aa8.05□□□□□ -1.12
SRRM1-213ENST00000485441 PPP2R3AQ06190 1150 aa8.05□□□□□ -1.12
SRRM1-213ENST00000485441 ZNF252P-AS1Q0IIN9 211 aa8.05□□□□□ -1.12
SRRM1-213ENST00000485441 GDF6Q6KF10 455 aaPredicted RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms