RNA–Protein interactions for RNA: ENST00000484266.5

CHKB-210, Transcript of choline kinase beta, human

TSL 2

Gene CHKB, Length 1,401 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHKB-210	ENST00000484266	C16orf71	Q8IYS4	520 aa	Predicted RBP	40.53	■■■■■ 4.08
CHKB-210	ENST00000484266	RAB11FIP3	O75154	756 aa		40.52	■■■■■ 4.08
CHKB-210	ENST00000484266	FRAT2	O75474	233 aa	Predicted RBP	40.51	■■■■■ 4.08
CHKB-210	ENST00000484266	CERS5	Q8N5B7	392 aa		40.51	■■■■■ 4.08
CHKB-210	ENST00000484266	KIF1BP	Q96EK5	621 aa		40.51	■■■■■ 4.08
CHKB-210	ENST00000484266	ADAMTSL1	Q8N6G6	1762 aa		40.51	■■■■■ 4.08
CHKB-210	ENST00000484266	APBB1	O00213	710 aa		40.5	■■■■■ 4.07
CHKB-210	ENST00000484266	ADARB2	Q9NS39	739 aa	Known RBP	40.5	■■■■■ 4.07
CHKB-210	ENST00000484266	GNL3L	Q9NVN8	582 aa	Known RBP	40.5	■■■■■ 4.07
CHKB-210	ENST00000484266	COL1A1	P02452	1464 aa	Predicted RBP	40.5	■■■■■ 4.07
CHKB-210	ENST00000484266	FKBP1A	P62942	108 aa	Known RBP	40.5	■■■■■ 4.07
CHKB-210	ENST00000484266	EAF2	Q96CJ1	260 aa	Predicted RBP	40.5	■■■■■ 4.07
CHKB-210	ENST00000484266	DCTPP1	Q9H773	170 aa		40.5	■■■■■ 4.07
CHKB-210	ENST00000484266		H7C1D1	291 aa		40.49	■■■■■ 4.07
CHKB-210	ENST00000484266	TOMM70	O94826	608 aa		40.49	■■■■■ 4.07
CHKB-210	ENST00000484266	IL1RAPL2	Q9NP60	686 aa		40.49	■■■■■ 4.07
CHKB-210	ENST00000484266	POTEI	P0CG38	1075 aa		40.48	■■■■■ 4.07
CHKB-210	ENST00000484266	POTEJ	P0CG39	1038 aa		40.48	■■■■■ 4.07
CHKB-210	ENST00000484266	CHAF1A	Q13111	956 aa	Predicted RBP	40.48	■■■■■ 4.07
CHKB-210	ENST00000484266	PNMA8A	Q86V59	439 aa	Predicted RBP	40.48	■■■■■ 4.07
CHKB-210	ENST00000484266	ZBTB22	O15209	634 aa		40.47	■■■■■ 4.07
CHKB-210	ENST00000484266	USP17L8	P0C7I0	530 aa		40.47	■■■■■ 4.07
CHKB-210	ENST00000484266	EAPP	Q56P03	285 aa	Predicted RBP	40.47	■■■■■ 4.07
CHKB-210	ENST00000484266	DBNDD2	Q9BQY9	259 aa		40.47	■■■■■ 4.07
CHKB-210	ENST00000484266	ZNF280A	P59817	542 aa	Predicted RBP	40.46	■■■■■ 4.07
CHKB-210	ENST00000484266	MFSD14B	Q5SR56	506 aa		40.46	■■■■■ 4.07
CHKB-210	ENST00000484266	GORAB	Q5T7V8	394 aa		40.46	■■■■■ 4.07
CHKB-210	ENST00000484266	USP50	Q70EL3	339 aa	Predicted RBP	40.46	■■■■■ 4.07
CHKB-210	ENST00000484266	KIAA0825	Q8IV33	1275 aa		40.45	■■■■■ 4.07
CHKB-210	ENST00000484266	CCDC8	Q9H0W5	538 aa	Predicted RBP	40.45	■■■■■ 4.07
CHKB-210	ENST00000484266	DBNL	Q9UJU6	430 aa	Known RBP	40.45	■■■■■ 4.07
CHKB-210	ENST00000484266	SEMA3E	O15041	775 aa		40.44	■■■■■ 4.06
CHKB-210	ENST00000484266	SAMD7	Q7Z3H4	446 aa		40.44	■■■■■ 4.06
CHKB-210	ENST00000484266	TRPM4	Q8TD43	1214 aa		40.44	■■■■■ 4.06
CHKB-210	ENST00000484266	TLR7	Q9NYK1	1049 aa	Known RBP	40.44	■■■■■ 4.06
CHKB-210	ENST00000484266	AACS	Q86V21	672 aa		40.43	■■■■■ 4.06
CHKB-210	ENST00000484266	RBM46	Q8TBY0	533 aa	Known RBP	40.43	■■■■■ 4.06
CHKB-210	ENST00000484266	EGFR	P00533	1210 aa		40.42	■■■■■ 4.06
CHKB-210	ENST00000484266	HDAC1	Q13547	482 aa	Predicted RBP	40.42	■■■■■ 4.06
CHKB-210	ENST00000484266	TBC1D22A	Q8WUA7	517 aa		40.42	■■■■■ 4.06
CHKB-210	ENST00000484266	DENND2A	Q9ULE3	1009 aa		40.42	■■■■■ 4.06
CHKB-210	ENST00000484266	RASGRF1	Q13972	1273 aa		40.42	■■■■■ 4.06
CHKB-210	ENST00000484266	LDHD	Q86WU2	507 aa		40.42	■■■■■ 4.06
CHKB-210	ENST00000484266	CLASRP	Q8N2M8	674 aa	Known RBP	40.42	■■■■■ 4.06
CHKB-210	ENST00000484266	ARID4A	P29374	1257 aa	Predicted RBP	40.41	■■■■■ 4.06
CHKB-210	ENST00000484266	HIRA	P54198	1017 aa	Predicted RBP	40.41	■■■■■ 4.06
CHKB-210	ENST00000484266	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	40.41	■■■■■ 4.06
CHKB-210	ENST00000484266	LRRCC1	Q9C099	1032 aa		40.41	■■■■■ 4.06
CHKB-210	ENST00000484266	OGFOD1	Q8N543	542 aa		40.4	■■■■■ 4.06
CHKB-210	ENST00000484266	WDR66	Q8TBY9	1149 aa		40.39	■■■■■ 4.06
CHKB-210	ENST00000484266	MYOZ2	Q9NPC6	264 aa		40.39	■■■■■ 4.06
CHKB-210	ENST00000484266	PDS5A	Q29RF7	1337 aa	Known RBP	40.38	■■■■■ 4.05
CHKB-210	ENST00000484266		F8W031	263 aa	Predicted RBP	40.38	■■■■■ 4.05
CHKB-210	ENST00000484266	MMP14	P50281	582 aa		40.38	■■■■■ 4.05
CHKB-210	ENST00000484266	KIF4B	Q2VIQ3	1234 aa		40.38	■■■■■ 4.05
CHKB-210	ENST00000484266	CCDC158	Q5M9N0	1113 aa		40.38	■■■■■ 4.05
CHKB-210	ENST00000484266	RBM26	Q5T8P6	1007 aa	Known RBP	40.38	■■■■■ 4.05
CHKB-210	ENST00000484266	GRIK5	Q16478	980 aa		40.37	■■■■■ 4.05
CHKB-210	ENST00000484266	HDAC9	Q9UKV0	1011 aa		40.37	■■■■■ 4.05
CHKB-210	ENST00000484266	CLEC11A	Q9Y240	323 aa		40.37	■■■■■ 4.05
CHKB-210	ENST00000484266	AKAP11	Q9UKA4	1901 aa		40.36	■■■■■ 4.05
CHKB-210	ENST00000484266	UQCRFS1P1	P0C7P4	283 aa		40.36	■■■■■ 4.05
CHKB-210	ENST00000484266	TTC39A	Q5SRH9	613 aa		40.36	■■■■■ 4.05
CHKB-210	ENST00000484266	SMC1B	Q8NDV3	1235 aa		40.36	■■■■■ 4.05
CHKB-210	ENST00000484266	SMARCA5	O60264	1052 aa	Predicted RBP	40.35	■■■■■ 4.05
CHKB-210	ENST00000484266	CENPB	P07199	599 aa	Predicted RBP	40.35	■■■■■ 4.05
CHKB-210	ENST00000484266	SCARF1	Q14162	830 aa		40.35	■■■■■ 4.05
CHKB-210	ENST00000484266	CHADL	Q6NUI6	762 aa		40.35	■■■■■ 4.05
CHKB-210	ENST00000484266	BCL11A	Q9H165	835 aa		40.34	■■■■■ 4.05
CHKB-210	ENST00000484266	HMG20B	Q9P0W2	317 aa		40.34	■■■■■ 4.05
CHKB-210	ENST00000484266	SALL1	Q9NSC2	1324 aa		40.34	■■■■■ 4.05
CHKB-210	ENST00000484266	MCAM	P43121	646 aa		40.33	■■■■■ 4.05
CHKB-210	ENST00000484266	ZNF512B	Q96KM6	892 aa	Predicted RBP	40.33	■■■■■ 4.05
CHKB-210	ENST00000484266	TTF2	Q9UNY4	1162 aa	Known RBP	40.33	■■■■■ 4.05
CHKB-210	ENST00000484266	IFIT2	P09913	472 aa	Known RBP	40.33	■■■■■ 4.05
CHKB-210	ENST00000484266	PI16	Q6UXB8	463 aa		40.33	■■■■■ 4.05
CHKB-210	ENST00000484266	SPATA5	Q8NB90	893 aa		40.33	■■■■■ 4.05
CHKB-210	ENST00000484266	FSTL1	Q12841	308 aa		40.32	■■■■■ 4.04
CHKB-210	ENST00000484266	SUGT1	Q9Y2Z0	365 aa		40.32	■■■■■ 4.04
CHKB-210	ENST00000484266	RWDD1	Q9H446	243 aa	Predicted RBP	40.31	■■■■■ 4.04
CHKB-210	ENST00000484266	PGAP2	Q9UHJ9	254 aa		40.31	■■■■■ 4.04
CHKB-210	ENST00000484266	C1QTNF8	P60827	252 aa		40.3	■■■■■ 4.04
CHKB-210	ENST00000484266	ZC3H15	Q8WU90	426 aa	Known RBP	40.3	■■■■■ 4.04
CHKB-210	ENST00000484266	MAP1S	Q66K74	1059 aa	Predicted RBP	40.29	■■■■■ 4.04
CHKB-210	ENST00000484266	GCC1	Q96CN9	775 aa		40.29	■■■■■ 4.04
CHKB-210	ENST00000484266	IGHD	P01880	384 aa		40.28	■■■■■ 4.04
CHKB-210	ENST00000484266	PRDX5	P30044	214 aa		40.27	■■■■■ 4.04
CHKB-210	ENST00000484266	ZBED3	Q96IU2	234 aa	Predicted RBP	40.27	■■■■■ 4.04
CHKB-210	ENST00000484266	POLR2A	P24928	1970 aa	Known RBP	40.27	■■■■■ 4.04
CHKB-210	ENST00000484266	WNT10B	O00744	389 aa		40.26	■■■■■ 4.04
CHKB-210	ENST00000484266	ZGPAT	Q8N5A5	531 aa	Known RBP	40.26	■■■■■ 4.04
CHKB-210	ENST00000484266	MTMR14	Q8NCE2	650 aa		40.26	■■■■■ 4.04
CHKB-210	ENST00000484266	ASTN2	O75129	1339 aa	Predicted RBP	40.26	■■■■■ 4.04
CHKB-210	ENST00000484266	ECM29	Q5VYK3	1845 aa		40.26	■■■■■ 4.03
CHKB-210	ENST00000484266	NBPF9	Q3BBW0	867 aa		40.25	■■■■■ 4.03
CHKB-210	ENST00000484266	CFAP100	Q494V2	611 aa		40.25	■■■■■ 4.03
CHKB-210	ENST00000484266	SNRK	Q9NRH2	765 aa		40.25	■■■■■ 4.03
CHKB-210	ENST00000484266	SERPINA10	Q9UK55	444 aa		40.25	■■■■■ 4.03
CHKB-210	ENST00000484266	PCDHAC2	Q9Y5I4	1007 aa		40.25	■■■■■ 4.03
CHKB-210	ENST00000484266	LDHB	P07195	334 aa	Known RBP	40.24	■■■■■ 4.03

Retrieved 100 of 20,778 RNA–protein pairs in 28 ms