RNA–Protein interactions for RNA: ENST00000484259.1

FXN-204, Transcript of frataxin, humanhuman

TSL 3

Gene FXN, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-204ENST00000484259 C11orf74Q86VG3 221 aa4.18□□□□□ -1.74
FXN-204ENST00000484259 KIAA0825Q8IV33 1275 aa4.18□□□□□ -1.74
FXN-204ENST00000484259 SPICE1Q8N0Z3 855 aa4.18□□□□□ -1.74
FXN-204ENST00000484259 SIX5Q8N196 739 aa4.18□□□□□ -1.74
FXN-204ENST00000484259 TTC8Q8TAM2 541 aa4.18□□□□□ -1.74
FXN-204ENST00000484259 CERKQ8TCT0 537 aa4.18□□□□□ -1.74
FXN-204ENST00000484259 DDX12PQ92771 950 aa4.18□□□□□ -1.74
FXN-204ENST00000484259 FAM210AQ96ND0 272 aa4.18□□□□□ -1.74
FXN-204ENST00000484259 FEZ1Q99689 392 aa4.18□□□□□ -1.74
FXN-204ENST00000484259 TRIM55Q9BYV6 548 aa4.18□□□□□ -1.74
FXN-204ENST00000484259 PDGFDQ9GZP0 370 aaPredicted RBP4.18□□□□□ -1.74
FXN-204ENST00000484259 NEUROD4Q9HD90 331 aa4.18□□□□□ -1.74
FXN-204ENST00000484259 KMT5AQ9NQR1 393 aa4.18□□□□□ -1.74
FXN-204ENST00000484259 TAGLN3Q9UI15 199 aa4.18□□□□□ -1.74
FXN-204ENST00000484259 MKL2Q9ULH7 1088 aa4.18□□□□□ -1.74
FXN-204ENST00000484259 SPG7Q9UQ90 795 aa4.18□□□□□ -1.74
FXN-204ENST00000484259 NOD1Q9Y239 953 aa4.18□□□□□ -1.74
FXN-204ENST00000484259 EMILIN1Q9Y6C2 1016 aa4.18□□□□□ -1.74
FXN-204ENST00000484259 GJA3Q9Y6H8 435 aa4.18□□□□□ -1.74
FXN-204ENST00000484259 RAD54L2Q9Y4B4 1467 aa4.18□□□□□ -1.74
FXN-204ENST00000484259 ESYT3A0FGR9 886 aa4.17□□□□□ -1.74
FXN-204ENST00000484259 KIF5CO60282 957 aa4.17□□□□□ -1.74
FXN-204ENST00000484259 CD2BP2O95400 341 aaKnown RBP4.17□□□□□ -1.74
FXN-204ENST00000484259 ADH1BP00325 375 aa4.17□□□□□ -1.74
FXN-204ENST00000484259 SSBP05455 408 aaKnown RBP eCLIP4.17□□□□□ -1.74
FXN-204ENST00000484259 NBPF7P0C2Y1 421 aaPredicted RBP4.17□□□□□ -1.74
FXN-204ENST00000484259 SRGNP10124 158 aa4.17□□□□□ -1.74
FXN-204ENST00000484259 SKIP12755 728 aa4.17□□□□□ -1.74
FXN-204ENST00000484259 VARSP26640 1264 aaKnown RBP4.17□□□□□ -1.74
FXN-204ENST00000484259 CNGA1P29973 690 aa4.17□□□□□ -1.74
FXN-204ENST00000484259 CD151P48509 253 aa4.17□□□□□ -1.74
FXN-204ENST00000484259 CDKN1CP49918 316 aaPredicted RBP4.17□□□□□ -1.74
FXN-204ENST00000484259 ZNF132P52740 706 aa4.17□□□□□ -1.74
FXN-204ENST00000484259 ATP2B2Q01814 1243 aa4.17□□□□□ -1.74
FXN-204ENST00000484259 IFT88Q13099 833 aa4.17□□□□□ -1.74
FXN-204ENST00000484259 DDX10Q13206 875 aaKnown RBP4.17□□□□□ -1.74
FXN-204ENST00000484259 TOMM20Q15388 145 aa4.17□□□□□ -1.74
FXN-204ENST00000484259 ZNF394Q53GI3 561 aa4.17□□□□□ -1.74
FXN-204ENST00000484259 SPECC1Q5M775 1068 aa4.17□□□□□ -1.74
FXN-204ENST00000484259 FAM83BQ5T0W9 1011 aa4.17□□□□□ -1.74
FXN-204ENST00000484259 RC3H1Q5TC82 1133 aaKnown RBP4.17□□□□□ -1.74
FXN-204ENST00000484259 ANO1Q5XXA6 986 aa4.17□□□□□ -1.74
FXN-204ENST00000484259 ERAP2Q6P179 960 aa4.17□□□□□ -1.74
FXN-204ENST00000484259 NFXL1Q6ZNB6 911 aa4.17□□□□□ -1.74
FXN-204ENST00000484259 METTL3Q86U44 580 aaKnown RBP4.17□□□□□ -1.74
FXN-204ENST00000484259 NUTM1Q86Y26 1132 aa4.17□□□□□ -1.74
FXN-204ENST00000484259 JAMLQ86YT9 394 aa4.17□□□□□ -1.74
FXN-204ENST00000484259 GTF3C2Q8WUA4 911 aaPredicted RBP4.17□□□□□ -1.74
FXN-204ENST00000484259 ITFG2Q969R8 447 aa4.17□□□□□ -1.74
FXN-204ENST00000484259 PGBD4Q96DM1 585 aa4.17□□□□□ -1.74
FXN-204ENST00000484259 ZNF830Q96NB3 372 aaPredicted RBP4.17□□□□□ -1.74
FXN-204ENST00000484259 SCLT1Q96NL6 688 aa4.17□□□□□ -1.74
FXN-204ENST00000484259 PSMG3-AS1Q96PY0 264 aa4.17□□□□□ -1.74
FXN-204ENST00000484259 DEPDC7Q96QD5 511 aa4.17□□□□□ -1.74
FXN-204ENST00000484259 CITED4Q96RK1 184 aa4.17□□□□□ -1.74
FXN-204ENST00000484259 C22orf23Q9BZE7 217 aa4.17□□□□□ -1.74
FXN-204ENST00000484259 SLC6A16Q9GZN6 736 aa4.17□□□□□ -1.74
FXN-204ENST00000484259 SUDS3Q9H7L9 328 aaPredicted RBP4.17□□□□□ -1.74
FXN-204ENST00000484259 CD248Q9HCU0 757 aa4.17□□□□□ -1.74
FXN-204ENST00000484259 SRA1Q9HD15 236 aaKnown RBP4.17□□□□□ -1.74
FXN-204ENST00000484259 RIC8AQ9NPQ8 531 aa4.17□□□□□ -1.74
FXN-204ENST00000484259 ATG3Q9NT62 314 aa4.17□□□□□ -1.74
FXN-204ENST00000484259 SNTG2Q9NY99 539 aa4.17□□□□□ -1.74
FXN-204ENST00000484259 C9orf78Q9NZ63 289 aaPredicted RBP4.17□□□□□ -1.74
FXN-204ENST00000484259 IKBKGQ9Y6K9 419 aa4.17□□□□□ -1.74
FXN-204ENST00000484259 BICRAQ9NZM4 1560 aa4.17□□□□□ -1.74
FXN-204ENST00000484259 CENPJQ9HC77 1338 aaPredicted RBP4.17□□□□□ -1.74
FXN-204ENST00000484259 WASHC2CQ9Y4E1 1318 aa4.17□□□□□ -1.74
FXN-204ENST00000484259 SHTN1A0MZ66 631 aa4.16□□□□□ -1.74
FXN-204ENST00000484259 IQCA1LA6NCM1 817 aa4.16□□□□□ -1.74
FXN-204ENST00000484259 PRSS47A8MTI9 375 aa4.16□□□□□ -1.74
FXN-204ENST00000484259 USP17L5A8MUK1 530 aa4.16□□□□□ -1.74
FXN-204ENST00000484259 IPO8O15397 1037 aaKnown RBP4.16□□□□□ -1.74
FXN-204ENST00000484259 KIF1CO43896 1103 aaKnown RBP4.16□□□□□ -1.74
FXN-204ENST00000484259 RASGRP1O95267 797 aa4.16□□□□□ -1.74
FXN-204ENST00000484259 SCGB1D2O95969 90 aa4.16□□□□□ -1.74
FXN-204ENST00000484259 NEFHP12036 1026 aa4.16□□□□□ -1.74
FXN-204ENST00000484259 SLC5A1P13866 664 aa4.16□□□□□ -1.74
FXN-204ENST00000484259 OAS2P29728 719 aaKnown RBP4.16□□□□□ -1.74
FXN-204ENST00000484259 MAPK8P45983 427 aa4.16□□□□□ -1.74
FXN-204ENST00000484259 HTR3AP46098 478 aa4.16□□□□□ -1.74
FXN-204ENST00000484259 RPIAP49247 311 aa4.16□□□□□ -1.74
FXN-204ENST00000484259 PURAQ00577 322 aaKnown RBP4.16□□□□□ -1.74
FXN-204ENST00000484259 SATB1Q01826 763 aa4.16□□□□□ -1.74
FXN-204ENST00000484259 SFSWAPQ12872 951 aaKnown RBP4.16□□□□□ -1.74
FXN-204ENST00000484259 TRIM29Q14134 588 aa4.16□□□□□ -1.74
FXN-204ENST00000484259 LRRC41Q15345 812 aa4.16□□□□□ -1.74
FXN-204ENST00000484259 DACT2Q5SW24 774 aa4.16□□□□□ -1.74
FXN-204ENST00000484259 ARMC3Q5W041 872 aa4.16□□□□□ -1.74
FXN-204ENST00000484259 CPLX2Q6PUV4 134 aaKnown RBP4.16□□□□□ -1.74
FXN-204ENST00000484259 OTUD6AQ7L8S5 288 aa4.16□□□□□ -1.74
FXN-204ENST00000484259 HS2ST1Q7LGA3 356 aa4.16□□□□□ -1.74
FXN-204ENST00000484259 RASSF3Q86WH2 238 aa4.16□□□□□ -1.74
FXN-204ENST00000484259 SKAP1Q86WV1 359 aa4.16□□□□□ -1.74
FXN-204ENST00000484259 ACRBPQ8NEB7 543 aa4.16□□□□□ -1.74
FXN-204ENST00000484259 TRMT2BQ96GJ1 504 aaKnown RBP4.16□□□□□ -1.74
FXN-204ENST00000484259 CDK5RAP3Q96JB5 506 aa4.16□□□□□ -1.74
FXN-204ENST00000484259 SEC16BQ96JE7 1060 aa4.16□□□□□ -1.74
FXN-204ENST00000484259 TMEM87BQ96K49 555 aa4.16□□□□□ -1.74
FXN-204ENST00000484259 MAP3K14Q99558 947 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms