RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 TMX3Q96JJ7 454 aa31.33■■■□□ 2.61
SHOX2-204ENST00000483851 FAM84BQ96KN1 310 aaPredicted RBP31.33■■■□□ 2.61
SHOX2-204ENST00000483851 BRIP1Q9BX63 1249 aa31.33■■■□□ 2.61
SHOX2-204ENST00000483851 DENND2AQ9ULE3 1009 aa31.33■■■□□ 2.61
SHOX2-204ENST00000483851 ADCK5Q3MIX3 580 aa31.33■■■□□ 2.61
SHOX2-204ENST00000483851 CTNNA3Q9UI47 895 aa31.33■■■□□ 2.61
SHOX2-204ENST00000483851 PDE6AP16499 860 aa31.32■■■□□ 2.6
SHOX2-204ENST00000483851 CUL4AQ13619 759 aa31.32■■■□□ 2.6
SHOX2-204ENST00000483851 SLFNL1Q499Z3 407 aa31.32■■■□□ 2.6
SHOX2-204ENST00000483851 VPS37DQ86XT2 251 aa31.32■■■□□ 2.6
SHOX2-204ENST00000483851 ALDH8A1Q9H2A2 487 aaPredicted RBP31.32■■■□□ 2.6
SHOX2-204ENST00000483851 MYO5AQ9Y4I1 1855 aaKnown RBP31.32■■■□□ 2.6
SHOX2-204ENST00000483851 INTS4Q96HW7 963 aaKnown RBP31.31■■■□□ 2.6
SHOX2-204ENST00000483851 XDHP47989 1333 aa31.31■■■□□ 2.6
SHOX2-204ENST00000483851 GYG1P46976 350 aa31.31■■■□□ 2.6
SHOX2-204ENST00000483851 PUS7LQ9H0K6 701 aaKnown RBP31.31■■■□□ 2.6
SHOX2-204ENST00000483851 TCRBV5S4A2TA0A5A2 114 aa31.3■■■□□ 2.6
SHOX2-204ENST00000483851 C15orf52Q6ZUT6 534 aaKnown RBP31.29■■■□□ 2.6
SHOX2-204ENST00000483851 PDRG1Q9NUG6 133 aa31.29■■■□□ 2.6
SHOX2-204ENST00000483851 ZNF532Q9HCE3 1301 aa31.29■■■□□ 2.6
SHOX2-204ENST00000483851 GPAA1O43292 621 aa31.29■■■□□ 2.6
SHOX2-204ENST00000483851 IGSF3O75054 1194 aa31.29■■■□□ 2.6
SHOX2-204ENST00000483851 CYP21A2P08686 494 aa31.29■■■□□ 2.6
SHOX2-204ENST00000483851 SLC15A2Q16348 729 aa31.29■■■□□ 2.6
SHOX2-204ENST00000483851 BLOC1S2Q6QNY1 142 aa31.29■■■□□ 2.6
SHOX2-204ENST00000483851 LIMCH1Q9UPQ0 1083 aa31.29■■■□□ 2.6
SHOX2-204ENST00000483851 PARP3Q9Y6F1 533 aa31.29■■■□□ 2.6
SHOX2-204ENST00000483851 HIBADHP31937 336 aaKnown RBP31.28■■■□□ 2.6
SHOX2-204ENST00000483851 TMED8Q6PL24 325 aaPredicted RBP31.28■■■□□ 2.6
SHOX2-204ENST00000483851 STK32BQ9NY57 414 aa31.28■■■□□ 2.6
SHOX2-204ENST00000483851 IRS2Q9Y4H2 1338 aa31.28■■■□□ 2.6
SHOX2-204ENST00000483851 ANKRD31Q8N7Z5 1873 aa31.28■■■□□ 2.6
SHOX2-204ENST00000483851 EZH2Q15910 746 aaKnown RBP31.27■■■□□ 2.6
SHOX2-204ENST00000483851 WWC3Q9ULE0 1092 aa31.27■■■□□ 2.6
SHOX2-204ENST00000483851 HMGB1P09429 215 aaKnown RBP31.27■■■□□ 2.6
SHOX2-204ENST00000483851 MCM4P33991 863 aa31.27■■■□□ 2.6
SHOX2-204ENST00000483851 AK2P54819 239 aa31.27■■■□□ 2.6
SHOX2-204ENST00000483851 EN1Q05925 392 aaPredicted RBP31.27■■■□□ 2.6
SHOX2-204ENST00000483851 ANKRD1Q15327 319 aa31.27■■■□□ 2.6
SHOX2-204ENST00000483851 ANKIB1Q9P2G1 1089 aa31.27■■■□□ 2.6
SHOX2-204ENST00000483851 ZSCAN31Q96LW9 406 aaPredicted RBP31.26■■■□□ 2.59
SHOX2-204ENST00000483851 RPS6KB1P23443 525 aa31.25■■■□□ 2.59
SHOX2-204ENST00000483851 SF3B2Q13435 895 aaKnown RBP31.25■■■□□ 2.59
SHOX2-204ENST00000483851 NEK1Q96PY6 1258 aa31.25■■■□□ 2.59
SHOX2-204ENST00000483851 MMP10P09238 476 aa31.25■■■□□ 2.59
SHOX2-204ENST00000483851 PDE6BP35913 854 aa31.25■■■□□ 2.59
SHOX2-204ENST00000483851 BAG6P46379 1132 aa31.25■■■□□ 2.59
SHOX2-204ENST00000483851 LRP2BPQ9P2M1 347 aa31.25■■■□□ 2.59
SHOX2-204ENST00000483851 MYH13Q9UKX3 1938 aa31.24■■■□□ 2.59
SHOX2-204ENST00000483851 WTIPA6NIX2 430 aaPredicted RBP31.24■■■□□ 2.59
SHOX2-204ENST00000483851 MAGEB6Q8N7X4 407 aa31.23■■■□□ 2.59
SHOX2-204ENST00000483851 SH2B1Q9NRF2 756 aaPredicted RBP31.23■■■□□ 2.59
SHOX2-204ENST00000483851 PODXL2Q9NZ53 605 aa31.23■■■□□ 2.59
SHOX2-204ENST00000483851 LRRC37AA6NMS7 1700 aa31.23■■■□□ 2.59
SHOX2-204ENST00000483851 ATP2B4P23634 1241 aa31.23■■■□□ 2.59
SHOX2-204ENST00000483851 FOXP2O15409 715 aa31.22■■■□□ 2.59
SHOX2-204ENST00000483851 NPR1P16066 1061 aa31.22■■■□□ 2.59
SHOX2-204ENST00000483851 AIDAQ96BJ3 306 aa31.22■■■□□ 2.59
SHOX2-204ENST00000483851 ZMYM6O95789 1325 aa31.22■■■□□ 2.59
SHOX2-204ENST00000483851 COL1A1P02452 1464 aaPredicted RBP31.22■■■□□ 2.59
SHOX2-204ENST00000483851 NUCB2P80303 420 aa31.21■■■□□ 2.59
SHOX2-204ENST00000483851 IMMTQ16891 758 aaKnown RBP31.21■■■□□ 2.59
SHOX2-204ENST00000483851 FOXD4L1Q9NU39 408 aa31.21■■■□□ 2.59
SHOX2-204ENST00000483851 GNAT2P19087 354 aa31.21■■■□□ 2.59
SHOX2-204ENST00000483851 STRBPQ96SI9 672 aaKnown RBP31.21■■■□□ 2.59
SHOX2-204ENST00000483851 ANO8Q9HCE9 1232 aaPredicted RBP31.21■■■□□ 2.59
SHOX2-204ENST00000483851 TAF6LQ9Y6J9 622 aa31.21■■■□□ 2.59
SHOX2-204ENST00000483851 FGAP02671 866 aa31.2■■■□□ 2.58
SHOX2-204ENST00000483851 SRGNP10124 158 aa31.2■■■□□ 2.58
SHOX2-204ENST00000483851 CPA1P15085 419 aa31.2■■■□□ 2.58
SHOX2-204ENST00000483851 KLRK1P26718 216 aa31.2■■■□□ 2.58
SHOX2-204ENST00000483851 RAB3GAP1Q15042 981 aa31.2■■■□□ 2.58
SHOX2-204ENST00000483851 ALX1Q15699 326 aa31.2■■■□□ 2.58
SHOX2-204ENST00000483851 ALDH1B1P30837 517 aa31.19■■■□□ 2.58
SHOX2-204ENST00000483851 SP8Q8IXZ3 490 aa31.19■■■□□ 2.58
SHOX2-204ENST00000483851 IQSEC3Q9UPP2 1182 aaPredicted RBP31.19■■■□□ 2.58
SHOX2-204ENST00000483851 GPSM2P81274 684 aa31.18■■■□□ 2.58
SHOX2-204ENST00000483851 ZNF804AQ7Z570 1209 aa31.18■■■□□ 2.58
SHOX2-204ENST00000483851 ABCF2Q9UG63 623 aa31.17■■■□□ 2.58
SHOX2-204ENST00000483851 GGA1Q9UJY5 639 aa31.17■■■□□ 2.58
SHOX2-204ENST00000483851 NOL8Q76FK4 1167 aaKnown RBP31.16■■■□□ 2.58
SHOX2-204ENST00000483851 ZGPATQ8N5A5 531 aaKnown RBP31.16■■■□□ 2.58
SHOX2-204ENST00000483851 NSFL1CQ9UNZ2 370 aaKnown RBP31.16■■■□□ 2.58
SHOX2-204ENST00000483851 SALL1Q9NSC2 1324 aa31.16■■■□□ 2.58
SHOX2-204ENST00000483851 PATL2C9JE40 543 aaKnown RBP31.16■■■□□ 2.58
SHOX2-204ENST00000483851 E7EWF7 191 aa31.16■■■□□ 2.58
SHOX2-204ENST00000483851 DHX32Q7L7V1 743 aaKnown RBP31.16■■■□□ 2.58
SHOX2-204ENST00000483851 RAI14Q9P0K7 980 aa31.16■■■□□ 2.58
SHOX2-204ENST00000483851 PPEF1O14829 653 aaPredicted RBP31.15■■■□□ 2.58
SHOX2-204ENST00000483851 STOX1Q6ZVD7 989 aa31.15■■■□□ 2.58
SHOX2-204ENST00000483851 TXNRD3Q86VQ6 643 aa31.15■■■□□ 2.58
SHOX2-204ENST00000483851 TDRD7Q8NHU6 1098 aaKnown RBP31.15■■■□□ 2.58
SHOX2-204ENST00000483851 MASTLQ96GX5 879 aa31.15■■■□□ 2.58
SHOX2-204ENST00000483851 ATP6V0A2Q9Y487 856 aa31.15■■■□□ 2.58
SHOX2-204ENST00000483851 ZSCAN21Q9Y5A6 473 aaPredicted RBP31.15■■■□□ 2.58
SHOX2-204ENST00000483851 CACNA1SQ13698 1873 aa31.15■■■□□ 2.58
SHOX2-204ENST00000483851 LTBP1Q14766 1721 aa31.15■■■□□ 2.58
SHOX2-204ENST00000483851 LAMA4Q16363 1823 aa31.15■■■□□ 2.58
SHOX2-204ENST00000483851 ZNF213O14771 459 aa31.14■■■□□ 2.58
SHOX2-204ENST00000483851 SPTY2D1Q68D10 685 aaPredicted RBP31.14■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms