RNA–Protein interactions for RNA: ENST00000481020.5

NR1H3-220, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5

Gene NR1H3, Length 1,704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-220ENST00000481020 NCAPHQ15003 741 aa16.59■□□□□ 0.25
NR1H3-220ENST00000481020 ERCC6LQ2NKX8 1250 aa16.59■□□□□ 0.25
NR1H3-220ENST00000481020 DPCR1Q3MIW9 517 aa16.59■□□□□ 0.25
NR1H3-220ENST00000481020 ARHGAP29Q52LW3 1261 aa16.59■□□□□ 0.25
NR1H3-220ENST00000481020 TXLNBQ8N3L3 684 aa16.59■□□□□ 0.25
NR1H3-220ENST00000481020 JMYQ8N9B5 988 aa16.59■□□□□ 0.25
NR1H3-220ENST00000481020 TUBE1Q9UJT0 475 aa16.59■□□□□ 0.25
NR1H3-220ENST00000481020 PXDNQ92626 1479 aa16.58■□□□□ 0.24
NR1H3-220ENST00000481020 NEDD4P46934 1319 aa16.58■□□□□ 0.24
NR1H3-220ENST00000481020 MAP3K15Q6ZN16 1313 aa16.58■□□□□ 0.24
NR1H3-220ENST00000481020 E7EWF7 191 aa16.58■□□□□ 0.24
NR1H3-220ENST00000481020 IGSF3O75054 1194 aa16.58■□□□□ 0.24
NR1H3-220ENST00000481020 NDUFA8P51970 172 aa16.58■□□□□ 0.24
NR1H3-220ENST00000481020 APOBRQ0VD83 1088 aa16.58■□□□□ 0.24
NR1H3-220ENST00000481020 TFCP2Q12800 502 aa16.58■□□□□ 0.24
NR1H3-220ENST00000481020 GPS2Q13227 327 aa16.58■□□□□ 0.24
NR1H3-220ENST00000481020 HOMER1Q86YM7 354 aa16.58■□□□□ 0.24
NR1H3-220ENST00000481020 MNS1Q8NEH6 495 aa16.58■□□□□ 0.24
NR1H3-220ENST00000481020 FBXO18Q8NFZ0 1043 aa16.58■□□□□ 0.24
NR1H3-220ENST00000481020 ARHGAP6O43182 974 aa16.57■□□□□ 0.24
NR1H3-220ENST00000481020 FANCCQ00597 558 aa16.57■□□□□ 0.24
NR1H3-220ENST00000481020 MUM1L1Q5H9M0 696 aa16.57■□□□□ 0.24
NR1H3-220ENST00000481020 SYNE3Q6ZMZ3 975 aa16.57■□□□□ 0.24
NR1H3-220ENST00000481020 GPR161Q8N6U8 529 aaKnown RBP16.57■□□□□ 0.24
NR1H3-220ENST00000481020 DNAJC2Q99543 621 aaKnown RBP16.57■□□□□ 0.24
NR1H3-220ENST00000481020 UBXN6Q9BZV1 441 aa16.57■□□□□ 0.24
NR1H3-220ENST00000481020 PPP6R2O75170 966 aa16.56■□□□□ 0.24
NR1H3-220ENST00000481020 TADA3O75528 432 aa16.56■□□□□ 0.24
NR1H3-220ENST00000481020 ZNF202O95125 648 aa16.56■□□□□ 0.24
NR1H3-220ENST00000481020 KCNA6P17658 529 aa16.56■□□□□ 0.24
NR1H3-220ENST00000481020 MYL5Q02045 173 aa16.56■□□□□ 0.24
NR1H3-220ENST00000481020 MYSM1Q5VVJ2 828 aa16.56■□□□□ 0.24
NR1H3-220ENST00000481020 C8orf76Q96K31 380 aa16.56■□□□□ 0.24
NR1H3-220ENST00000481020 PAG1Q9NWQ8 432 aa16.56■□□□□ 0.24
NR1H3-220ENST00000481020 ZFYP08048 801 aaPredicted RBP16.56■□□□□ 0.24
NR1H3-220ENST00000481020 ANKRD13DQ6ZTN6 518 aa16.56■□□□□ 0.24
NR1H3-220ENST00000481020 MSL3Q8N5Y2 521 aaKnown RBP16.56■□□□□ 0.24
NR1H3-220ENST00000481020 FTOQ9C0B1 505 aaKnown RBP eCLIP16.56■□□□□ 0.24
NR1H3-220ENST00000481020 ATG3Q9NT62 314 aa16.56■□□□□ 0.24
NR1H3-220ENST00000481020 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.56■□□□□ 0.24
NR1H3-220ENST00000481020 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.56■□□□□ 0.24
NR1H3-220ENST00000481020 LAMA4Q16363 1823 aa16.56■□□□□ 0.24
NR1H3-220ENST00000481020 ABCC12Q96J65 1359 aa16.55■□□□□ 0.24
NR1H3-220ENST00000481020 HSPD1P10809 573 aaKnown RBP16.55■□□□□ 0.24
NR1H3-220ENST00000481020 FDPSP14324 419 aaKnown RBP16.55■□□□□ 0.24
NR1H3-220ENST00000481020 TUBB2AQ13885 445 aa16.55■□□□□ 0.24
NR1H3-220ENST00000481020 ANO1Q5XXA6 986 aa16.55■□□□□ 0.24
NR1H3-220ENST00000481020 ZNF790Q6PG37 636 aa16.55■□□□□ 0.24
NR1H3-220ENST00000481020 TRIM65Q6PJ69 517 aa16.55■□□□□ 0.24
NR1H3-220ENST00000481020 ARHGEF25Q86VW2 580 aa16.55■□□□□ 0.24
NR1H3-220ENST00000481020 DBNDD2Q9BQY9 259 aa16.55■□□□□ 0.24
NR1H3-220ENST00000481020 TUBB2BQ9BVA1 445 aa16.55■□□□□ 0.24
NR1H3-220ENST00000481020 A0A1B0GVL5 298 aa16.54■□□□□ 0.24
NR1H3-220ENST00000481020 KDM4FA0A1W2PPD8 638 aa16.54■□□□□ 0.24
NR1H3-220ENST00000481020 RNF113AO15541 343 aaKnown RBP16.54■□□□□ 0.24
NR1H3-220ENST00000481020 PLA2G4AP47712 749 aa16.54■□□□□ 0.24
NR1H3-220ENST00000481020 SLC39A14Q15043 492 aa16.54■□□□□ 0.24
NR1H3-220ENST00000481020 EPHA10Q5JZY3 1008 aa16.54■□□□□ 0.24
NR1H3-220ENST00000481020 CCDC129Q6ZRS4 1044 aa16.54■□□□□ 0.24
NR1H3-220ENST00000481020 VSTM4Q8IW00 320 aa16.54■□□□□ 0.24
NR1H3-220ENST00000481020 EDC3Q96F86 508 aaKnown RBP16.54■□□□□ 0.24
NR1H3-220ENST00000481020 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.54■□□□□ 0.24
NR1H3-220ENST00000481020 IL15P40933 162 aaPredicted RBP16.53■□□□□ 0.24
NR1H3-220ENST00000481020 AXDND1Q5T1B0 1012 aaPredicted RBP16.53■□□□□ 0.24
NR1H3-220ENST00000481020 XAGE3Q8WTP9 111 aa16.53■□□□□ 0.24
NR1H3-220ENST00000481020 MYD88Q99836 296 aa16.53■□□□□ 0.24
NR1H3-220ENST00000481020 BCL11BQ9C0K0 894 aaPredicted RBP16.53■□□□□ 0.24
NR1H3-220ENST00000481020 TMEM51Q9NW97 253 aa16.53■□□□□ 0.24
NR1H3-220ENST00000481020 PSD3Q9NYI0 1048 aa16.53■□□□□ 0.24
NR1H3-220ENST00000481020 HOOK1Q9UJC3 728 aaKnown RBP16.53■□□□□ 0.24
NR1H3-220ENST00000481020 HPSEQ9Y251 543 aa16.53■□□□□ 0.24
NR1H3-220ENST00000481020 STX10O60499 249 aa16.53■□□□□ 0.24
NR1H3-220ENST00000481020 CDK11BP21127 795 aaKnown RBP16.53■□□□□ 0.24
NR1H3-220ENST00000481020 UBASH3AP57075 661 aa16.53■□□□□ 0.24
NR1H3-220ENST00000481020 CCT2P78371 535 aaKnown RBP16.53■□□□□ 0.24
NR1H3-220ENST00000481020 AIMP1Q12904 312 aaKnown RBP16.53■□□□□ 0.24
NR1H3-220ENST00000481020 SEC62Q99442 399 aaKnown RBP16.53■□□□□ 0.24
NR1H3-220ENST00000481020 FBXO3Q9UK99 471 aa16.53■□□□□ 0.24
NR1H3-220ENST00000481020 CDKL5O76039 1030 aa16.52■□□□□ 0.24
NR1H3-220ENST00000481020 CIAO1O76071 339 aa16.52■□□□□ 0.24
NR1H3-220ENST00000481020 PFKFB1P16118 471 aa16.52■□□□□ 0.24
NR1H3-220ENST00000481020 IMMTQ16891 758 aaKnown RBP16.52■□□□□ 0.24
NR1H3-220ENST00000481020 CT47A1Q5JQC4 288 aaPredicted RBP16.52■□□□□ 0.24
NR1H3-220ENST00000481020 OLFM4Q6UX06 510 aa16.52■□□□□ 0.24
NR1H3-220ENST00000481020 DDX46Q7L014 1031 aaKnown RBP16.52■□□□□ 0.24
NR1H3-220ENST00000481020 COPS6Q7L5N1 327 aa16.52■□□□□ 0.24
NR1H3-220ENST00000481020 LRP10Q7Z4F1 713 aa16.52■□□□□ 0.24
NR1H3-220ENST00000481020 C14orf37Q86TY3 774 aa16.52■□□□□ 0.24
NR1H3-220ENST00000481020 REXO1L1PQ8IX06 675 aa16.52■□□□□ 0.24
NR1H3-220ENST00000481020 KLHDC4Q8TBB5 520 aa16.52■□□□□ 0.24
NR1H3-220ENST00000481020 RABGGTAQ92696 567 aa16.52■□□□□ 0.24
NR1H3-220ENST00000481020 LRRC2Q9BYS8 371 aa16.52■□□□□ 0.24
NR1H3-220ENST00000481020 SLC52A2Q9HAB3 445 aa16.52■□□□□ 0.24
NR1H3-220ENST00000481020 CLIC4Q9Y696 253 aa16.52■□□□□ 0.24
NR1H3-220ENST00000481020 PARP3Q9Y6F1 533 aa16.52■□□□□ 0.24
NR1H3-220ENST00000481020 MST1RQ04912 1400 aa16.51■□□□□ 0.23
NR1H3-220ENST00000481020 POTEB2H3BUK9 544 aa16.51■□□□□ 0.23
NR1H3-220ENST00000481020 SNRPA1P09661 255 aaKnown RBP16.51■□□□□ 0.23
NR1H3-220ENST00000481020 TOP1P11387 765 aaKnown RBP16.51■□□□□ 0.23
NR1H3-220ENST00000481020 SYKP43405 635 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms