RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 TTC5Q8N0Z6 440 aa6.44□□□□□ -1.38
PTCD3-213ENST00000480102 LINC00116Q8NCU8 138 aa6.44□□□□□ -1.38
PTCD3-213ENST00000480102 RUNDC1Q96C34 613 aa6.44□□□□□ -1.38
PTCD3-213ENST00000480102 AGBL1Q96MI9 1066 aa6.44□□□□□ -1.38
PTCD3-213ENST00000480102 FMNL2Q96PY5 1086 aa6.44□□□□□ -1.38
PTCD3-213ENST00000480102 LGR6Q9HBX8 967 aa6.44□□□□□ -1.38
PTCD3-213ENST00000480102 RTCBQ9Y3I0 505 aaKnown RBP6.44□□□□□ -1.38
PTCD3-213ENST00000480102 ERBB4Q15303 1308 aa6.44□□□□□ -1.38
PTCD3-213ENST00000480102 MAPK8IP3Q9UPT6 1336 aa6.44□□□□□ -1.38
PTCD3-213ENST00000480102 TOGARAM1Q9Y4F4 1720 aa6.43□□□□□ -1.38
PTCD3-213ENST00000480102 A0A087WZG4 1122 aa6.43□□□□□ -1.38
PTCD3-213ENST00000480102 SOBPA7XYQ1 873 aa6.43□□□□□ -1.38
PTCD3-213ENST00000480102 TERTO14746 1132 aaKnown RBP6.43□□□□□ -1.38
PTCD3-213ENST00000480102 MAN1A2O60476 641 aa6.43□□□□□ -1.38
PTCD3-213ENST00000480102 CYP19A1P11511 503 aaPredicted RBP6.43□□□□□ -1.38
PTCD3-213ENST00000480102 IL6STP40189 918 aaPredicted RBP6.43□□□□□ -1.38
PTCD3-213ENST00000480102 ERVK-9P63128 1117 aa6.43□□□□□ -1.38
PTCD3-213ENST00000480102 RELBQ01201 579 aa6.43□□□□□ -1.38
PTCD3-213ENST00000480102 TRAPPC3LQ5T215 181 aa6.43□□□□□ -1.38
PTCD3-213ENST00000480102 TREML4Q6UXN2 200 aa6.43□□□□□ -1.38
PTCD3-213ENST00000480102 COL23A1Q86Y22 540 aaPredicted RBP6.43□□□□□ -1.38
PTCD3-213ENST00000480102 CEP126Q9P2H0 1117 aa6.43□□□□□ -1.38
PTCD3-213ENST00000480102 NXF1Q9UBU9 619 aaKnown RBP6.43□□□□□ -1.38
PTCD3-213ENST00000480102 DNMT3LQ9UJW3 386 aa6.43□□□□□ -1.38
PTCD3-213ENST00000480102 KCPQ6ZWJ8 1503 aa6.43□□□□□ -1.38
PTCD3-213ENST00000480102 CASZ1Q86V15 1759 aa6.43□□□□□ -1.38
PTCD3-213ENST00000480102 BTAF1O14981 1849 aa6.43□□□□□ -1.38
PTCD3-213ENST00000480102 QSER1Q2KHR3 1735 aa6.42□□□□□ -1.38
PTCD3-213ENST00000480102 DOT1LQ8TEK3 1739 aa6.42□□□□□ -1.38
PTCD3-213ENST00000480102 TTLL8A6PVC2 850 aa6.42□□□□□ -1.38
PTCD3-213ENST00000480102 WFS1O76024 890 aa6.42□□□□□ -1.38
PTCD3-213ENST00000480102 SNRPA1P09661 255 aaKnown RBP6.42□□□□□ -1.38
PTCD3-213ENST00000480102 CRKLP46109 303 aaKnown RBP6.42□□□□□ -1.38
PTCD3-213ENST00000480102 EIF5P55010 431 aaKnown RBP6.42□□□□□ -1.38
PTCD3-213ENST00000480102 WDR43Q15061 677 aaKnown RBP eCLIP6.42□□□□□ -1.38
PTCD3-213ENST00000480102 CC2D2BQ6DHV5 1058 aa6.42□□□□□ -1.38
PTCD3-213ENST00000480102 INTS5Q6P9B9 1019 aaKnown RBP6.42□□□□□ -1.38
PTCD3-213ENST00000480102 CLEC4GQ6UXB4 293 aa6.42□□□□□ -1.38
PTCD3-213ENST00000480102 NPAS3Q8IXF0 933 aa6.42□□□□□ -1.38
PTCD3-213ENST00000480102 KDF1Q8NAX2 398 aaPredicted RBP6.42□□□□□ -1.38
PTCD3-213ENST00000480102 POM121Q96HA1 1249 aa6.42□□□□□ -1.38
PTCD3-213ENST00000480102 ZNF496Q96IT1 587 aaPredicted RBP6.42□□□□□ -1.38
PTCD3-213ENST00000480102 CCDC87Q9NVE4 849 aa6.42□□□□□ -1.38
PTCD3-213ENST00000480102 PCDHB11Q9Y5F2 797 aa6.42□□□□□ -1.38
PTCD3-213ENST00000480102 USP42Q9H9J4 1324 aaKnown RBP6.42□□□□□ -1.38
PTCD3-213ENST00000480102 UTRNP46939 3433 aa6.41□□□□□ -1.38
PTCD3-213ENST00000480102 BTBD11A6QL63 1104 aa6.41□□□□□ -1.38
PTCD3-213ENST00000480102 CHL1O00533 1208 aa6.41□□□□□ -1.38
PTCD3-213ENST00000480102 ANP32CO43423 234 aa6.41□□□□□ -1.38
PTCD3-213ENST00000480102 TMPOP42166 694 aaKnown RBP6.41□□□□□ -1.38
PTCD3-213ENST00000480102 SCTRP47872 440 aa6.41□□□□□ -1.38
PTCD3-213ENST00000480102 TGFB2P61812 414 aa6.41□□□□□ -1.38
PTCD3-213ENST00000480102 INSM2Q96T92 566 aaPredicted RBP6.41□□□□□ -1.38
PTCD3-213ENST00000480102 SYT17Q9BSW7 474 aa6.41□□□□□ -1.38
PTCD3-213ENST00000480102 ADAMTS8Q9UP79 889 aa6.41□□□□□ -1.38
PTCD3-213ENST00000480102 IL16Q14005 1332 aa6.41□□□□□ -1.38
PTCD3-213ENST00000480102 COL24A1Q17RW2 1714 aa6.41□□□□□ -1.38
PTCD3-213ENST00000480102 C4BP0C0L5 1744 aa6.4□□□□□ -1.38
PTCD3-213ENST00000480102 RGPD2P0DJD1 1756 aa6.4□□□□□ -1.38
PTCD3-213ENST00000480102 ATP5J2-PTCD1G3V325 749 aa6.4□□□□□ -1.38
PTCD3-213ENST00000480102 PTCD1O75127 700 aaKnown RBP6.4□□□□□ -1.38
PTCD3-213ENST00000480102 ZNF853P0CG23 659 aa6.4□□□□□ -1.38
PTCD3-213ENST00000480102 GYS1P13807 737 aa6.4□□□□□ -1.38
PTCD3-213ENST00000480102 RFC4P35249 363 aa6.4□□□□□ -1.38
PTCD3-213ENST00000480102 SOX11P35716 441 aa6.4□□□□□ -1.38
PTCD3-213ENST00000480102 PTGIRP43119 386 aa6.4□□□□□ -1.38
PTCD3-213ENST00000480102 CTSOP43234 321 aaPredicted RBP6.4□□□□□ -1.38
PTCD3-213ENST00000480102 RIPK4P57078 832 aa6.4□□□□□ -1.38
PTCD3-213ENST00000480102 EIF4A1P60842 406 aaKnown RBP6.4□□□□□ -1.38
PTCD3-213ENST00000480102 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.4□□□□□ -1.381e-6■■■■□ 25.2
PTCD3-213ENST00000480102 CCDC85AQ96PX6 553 aaPredicted RBP6.4□□□□□ -1.38
PTCD3-213ENST00000480102 ZNF395Q9H8N7 513 aaPredicted RBP6.4□□□□□ -1.38
PTCD3-213ENST00000480102 POLMQ9NP87 494 aaPredicted RBP6.4□□□□□ -1.38
PTCD3-213ENST00000480102 NARFQ9UHQ1 456 aa6.4□□□□□ -1.38
PTCD3-213ENST00000480102 KAT6BQ8WYB5 2073 aa6.4□□□□□ -1.39
PTCD3-213ENST00000480102 ERVV-1B6SEH8 477 aa6.39□□□□□ -1.39
PTCD3-213ENST00000480102 RAD21O60216 631 aa6.39□□□□□ -1.39
PTCD3-213ENST00000480102 TRAK2O60296 914 aa6.39□□□□□ -1.39
PTCD3-213ENST00000480102 ZBTB7AO95365 584 aa6.39□□□□□ -1.39
PTCD3-213ENST00000480102 TM4SF1P30408 202 aa6.39□□□□□ -1.39
PTCD3-213ENST00000480102 SLFNL1Q499Z3 407 aa6.39□□□□□ -1.39
PTCD3-213ENST00000480102 LCE2CQ5TA81 110 aa6.39□□□□□ -1.39
PTCD3-213ENST00000480102 AMIGO3Q86WK7 504 aa6.39□□□□□ -1.39
PTCD3-213ENST00000480102 WWC1Q8IX03 1113 aa6.39□□□□□ -1.39
PTCD3-213ENST00000480102 DNAJC10Q8IXB1 793 aa6.39□□□□□ -1.39
PTCD3-213ENST00000480102 PHTF2Q8N3S3 785 aa6.39□□□□□ -1.39
PTCD3-213ENST00000480102 RNF217Q8TC41 542 aa6.39□□□□□ -1.39
PTCD3-213ENST00000480102 PDGFDQ9GZP0 370 aaPredicted RBP6.39□□□□□ -1.39
PTCD3-213ENST00000480102 IFT57Q9NWB7 429 aa6.39□□□□□ -1.39
PTCD3-213ENST00000480102 PPP1R1BQ9UD71 204 aaPredicted RBP6.39□□□□□ -1.39
PTCD3-213ENST00000480102 IBTKQ9P2D0 1353 aaPredicted RBP6.39□□□□□ -1.39
PTCD3-213ENST00000480102 KLRG2A4D1S0 409 aaPredicted RBP6.38□□□□□ -1.39
PTCD3-213ENST00000480102 H3BM21 787 aa6.38□□□□□ -1.39
PTCD3-213ENST00000480102 CCER2I3L3R5 266 aa6.38□□□□□ -1.39
PTCD3-213ENST00000480102 GRIN3BO60391 1043 aa6.38□□□□□ -1.39
PTCD3-213ENST00000480102 SEMA3FQ13275 785 aa6.38□□□□□ -1.39
PTCD3-213ENST00000480102 SLC39A6Q13433 755 aa6.38□□□□□ -1.39
PTCD3-213ENST00000480102 FOXD4L5Q5VV16 416 aaPredicted RBP6.38□□□□□ -1.39
PTCD3-213ENST00000480102 MCM10Q7L590 875 aa6.38□□□□□ -1.39
PTCD3-213ENST00000480102 CYP2U1Q7Z449 544 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 240.2 ms