RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 USP17L8P0C7I0 530 aa13.33□□□□□ -0.28
ATG4B-219ENST00000479941 ADORA1P30542 326 aa13.33□□□□□ -0.28
ATG4B-219ENST00000479941 GORABQ5T7V8 394 aa13.33□□□□□ -0.28
ATG4B-219ENST00000479941 CCDC102BQ68D86 513 aa13.33□□□□□ -0.28
ATG4B-219ENST00000479941 EXOC6Q8TAG9 804 aa13.33□□□□□ -0.28
ATG4B-219ENST00000479941 RBM46Q8TBY0 533 aaKnown RBP13.33□□□□□ -0.28
ATG4B-219ENST00000479941 RHPN1Q8TCX5 695 aa13.33□□□□□ -0.28
ATG4B-219ENST00000479941 KIF1BPQ96EK5 621 aa13.33□□□□□ -0.28
ATG4B-219ENST00000479941 EAPPQ56P03 285 aaPredicted RBP13.32□□□□□ -0.28
ATG4B-219ENST00000479941 OGFOD1Q8N543 542 aa13.32□□□□□ -0.28
ATG4B-219ENST00000479941 TBC1D22AQ8WUA7 517 aa13.32□□□□□ -0.28
ATG4B-219ENST00000479941 MXD3Q9BW11 206 aa13.32□□□□□ -0.28
ATG4B-219ENST00000479941 DCTPP1Q9H773 170 aa13.32□□□□□ -0.28
ATG4B-219ENST00000479941 IQSEC3Q9UPP2 1182 aaPredicted RBP13.32□□□□□ -0.28
ATG4B-219ENST00000479941 ARAP2Q8WZ64 1704 aa13.31□□□□□ -0.28
ATG4B-219ENST00000479941 PHKA1P46020 1223 aa13.31□□□□□ -0.28
ATG4B-219ENST00000479941 ZNF280AP59817 542 aaPredicted RBP13.31□□□□□ -0.28
ATG4B-219ENST00000479941 CHAF1AQ13111 956 aaPredicted RBP13.31□□□□□ -0.28
ATG4B-219ENST00000479941 MFSD14BQ5SR56 506 aa13.31□□□□□ -0.28
ATG4B-219ENST00000479941 LDHDQ86WU2 507 aa13.31□□□□□ -0.28
ATG4B-219ENST00000479941 CLASRPQ8N2M8 674 aaKnown RBP13.31□□□□□ -0.28
ATG4B-219ENST00000479941 CERS5Q8N5B7 392 aa13.31□□□□□ -0.28
ATG4B-219ENST00000479941 WDR66Q8TBY9 1149 aa13.31□□□□□ -0.28
ATG4B-219ENST00000479941 EAF2Q96CJ1 260 aaPredicted RBP13.31□□□□□ -0.28
ATG4B-219ENST00000479941 HDAC9Q9UKV0 1011 aa13.31□□□□□ -0.28
ATG4B-219ENST00000479941 DENND2AQ9ULE3 1009 aa13.31□□□□□ -0.28
ATG4B-219ENST00000479941 JAG2Q9Y219 1238 aa13.31□□□□□ -0.28
ATG4B-219ENST00000479941 SHTN1A0MZ66 631 aa13.3□□□□□ -0.28
ATG4B-219ENST00000479941 APBB1O00213 710 aa13.3□□□□□ -0.28
ATG4B-219ENST00000479941 CCDC158Q5M9N0 1113 aa13.3□□□□□ -0.28
ATG4B-219ENST00000479941 CHADLQ6NUI6 762 aa13.3□□□□□ -0.28
ATG4B-219ENST00000479941 KIAA0825Q8IV33 1275 aa13.3□□□□□ -0.28
ATG4B-219ENST00000479941 SMC1BQ8NDV3 1235 aa13.3□□□□□ -0.28
ATG4B-219ENST00000479941 ZC3H15Q8WU90 426 aaKnown RBP13.3□□□□□ -0.28
ATG4B-219ENST00000479941 LRRCC1Q9C099 1032 aa13.3□□□□□ -0.28
ATG4B-219ENST00000479941 IL1RAPL2Q9NP60 686 aa13.3□□□□□ -0.28
ATG4B-219ENST00000479941 CLEC11AQ9Y240 323 aa13.3□□□□□ -0.28
ATG4B-219ENST00000479941 PDS5AQ29RF7 1337 aaKnown RBP13.3□□□□□ -0.28
ATG4B-219ENST00000479941 ZNF646O15015 1829 aaPredicted RBP13.29□□□□□ -0.28
ATG4B-219ENST00000479941 CENPBP07199 599 aaPredicted RBP13.29□□□□□ -0.28
ATG4B-219ENST00000479941 UQCRFS1P1P0C7P4 283 aa13.29□□□□□ -0.28
ATG4B-219ENST00000479941 POTEIP0CG38 1075 aa13.29□□□□□ -0.28
ATG4B-219ENST00000479941 POTEJP0CG39 1038 aa13.29□□□□□ -0.28
ATG4B-219ENST00000479941 ARID4AP29374 1257 aaPredicted RBP13.29□□□□□ -0.28
ATG4B-219ENST00000479941 FSTL1Q12841 308 aa13.29□□□□□ -0.28
ATG4B-219ENST00000479941 HDAC1Q13547 482 aaPredicted RBP13.29□□□□□ -0.28
ATG4B-219ENST00000479941 SAMD7Q7Z3H4 446 aa13.29□□□□□ -0.28
ATG4B-219ENST00000479941 AACSQ86V21 672 aa13.29□□□□□ -0.28
ATG4B-219ENST00000479941 ZNF512BQ96KM6 892 aaPredicted RBP13.29□□□□□ -0.28
ATG4B-219ENST00000479941 DBNDD2Q9BQY9 259 aa13.29□□□□□ -0.28
ATG4B-219ENST00000479941 CCDC8Q9H0W5 538 aaPredicted RBP13.29□□□□□ -0.28
ATG4B-219ENST00000479941 MYOZ2Q9NPC6 264 aa13.29□□□□□ -0.28
ATG4B-219ENST00000479941 DBNLQ9UJU6 430 aaKnown RBP13.29□□□□□ -0.28
ATG4B-219ENST00000479941 SUGT1Q9Y2Z0 365 aa13.29□□□□□ -0.28
ATG4B-219ENST00000479941 HIRAP54198 1017 aaPredicted RBP13.28□□□□□ -0.28
ATG4B-219ENST00000479941 C1QTNF8P60827 252 aa13.28□□□□□ -0.28
ATG4B-219ENST00000479941 IRX6P78412 446 aaPredicted RBP13.28□□□□□ -0.28
ATG4B-219ENST00000479941 RASGRF1Q13972 1273 aa13.28□□□□□ -0.28
ATG4B-219ENST00000479941 KIF4BQ2VIQ3 1234 aa13.28□□□□□ -0.28
ATG4B-219ENST00000479941 TBC1D10BQ4KMP7 808 aaPredicted RBP13.28□□□□□ -0.28
ATG4B-219ENST00000479941 TTC39AQ5SRH9 613 aa13.28□□□□□ -0.28
ATG4B-219ENST00000479941 RBM26Q5T8P6 1007 aaKnown RBP13.28□□□□□ -0.28
ATG4B-219ENST00000479941 ZGPATQ8N5A5 531 aaKnown RBP13.28□□□□□ -0.28
ATG4B-219ENST00000479941 TRPM4Q8TD43 1214 aa13.28□□□□□ -0.28
ATG4B-219ENST00000479941 RWDD1Q9H446 243 aaPredicted RBP13.28□□□□□ -0.28
ATG4B-219ENST00000479941 PGAP2Q9UHJ9 254 aa13.28□□□□□ -0.28
ATG4B-219ENST00000479941 SALL1Q9NSC2 1324 aa13.28□□□□□ -0.28
ATG4B-219ENST00000479941 F8W031 263 aaPredicted RBP13.27□□□□□ -0.29
ATG4B-219ENST00000479941 EGFRP00533 1210 aa13.27□□□□□ -0.29
ATG4B-219ENST00000479941 IFIT2P09913 472 aaKnown RBP13.27□□□□□ -0.29
ATG4B-219ENST00000479941 GCC1Q96CN9 775 aa13.27□□□□□ -0.29
ATG4B-219ENST00000479941 TLR7Q9NYK1 1049 aaKnown RBP13.27□□□□□ -0.29
ATG4B-219ENST00000479941 HMG20BQ9P0W2 317 aa13.27□□□□□ -0.29
ATG4B-219ENST00000479941 SERPINA10Q9UK55 444 aa13.27□□□□□ -0.29
ATG4B-219ENST00000479941 TTF2Q9UNY4 1162 aaKnown RBP13.27□□□□□ -0.29
ATG4B-219ENST00000479941 COL1A1P02452 1464 aaPredicted RBP13.27□□□□□ -0.29
ATG4B-219ENST00000479941 ADAMTSL1Q8N6G6 1762 aa13.27□□□□□ -0.29
ATG4B-219ENST00000479941 MAST3O60307 1309 aa13.26□□□□□ -0.29
ATG4B-219ENST00000479941 HDLBPQ00341 1268 aaKnown RBP13.26□□□□□ -0.29
ATG4B-219ENST00000479941 SCARF1Q14162 830 aa13.26□□□□□ -0.29
ATG4B-219ENST00000479941 SPATA5Q8NB90 893 aa13.26□□□□□ -0.29
ATG4B-219ENST00000479941 MTMR14Q8NCE2 650 aa13.26□□□□□ -0.29
ATG4B-219ENST00000479941 MRIQ9BWK5 157 aa13.26□□□□□ -0.29
ATG4B-219ENST00000479941 MYH13Q9UKX3 1938 aa13.25□□□□□ -0.29
ATG4B-219ENST00000479941 WNT10BO00744 389 aa13.25□□□□□ -0.29
ATG4B-219ENST00000479941 MCAMP43121 646 aa13.25□□□□□ -0.29
ATG4B-219ENST00000479941 DLGAP5Q15398 846 aa13.25□□□□□ -0.29
ATG4B-219ENST00000479941 MAP1SQ66K74 1059 aaPredicted RBP13.25□□□□□ -0.29
ATG4B-219ENST00000479941 SPTY2D1Q68D10 685 aaPredicted RBP13.25□□□□□ -0.29
ATG4B-219ENST00000479941 CNTROBQ8N137 903 aa13.25□□□□□ -0.29
ATG4B-219ENST00000479941 SMARCA5O60264 1052 aaPredicted RBP13.24□□□□□ -0.29
ATG4B-219ENST00000479941 IGSF3O75054 1194 aa13.24□□□□□ -0.29
ATG4B-219ENST00000479941 LDHBP07195 334 aaKnown RBP13.24□□□□□ -0.29
ATG4B-219ENST00000479941 RBM5P52756 815 aaKnown RBP eCLIP13.24□□□□□ -0.29
ATG4B-219ENST00000479941 GRIK5Q16478 980 aa13.24□□□□□ -0.29
ATG4B-219ENST00000479941 NBPF9Q3BBW0 867 aa13.24□□□□□ -0.29
ATG4B-219ENST00000479941 CFAP100Q494V2 611 aa13.24□□□□□ -0.29
ATG4B-219ENST00000479941 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.24□□□□□ -0.29
ATG4B-219ENST00000479941 DCPSQ96C86 337 aaKnown RBP13.24□□□□□ -0.29
ATG4B-219ENST00000479941 ZBED3Q96IU2 234 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms