RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 BCAMP50895 628 aa12.72□□□□□ -0.37
HDAC6-222ENST00000478095 GTF2IP78347 998 aa12.72□□□□□ -0.37
HDAC6-222ENST00000478095 RSBN1LQ6PCB5 846 aaPredicted RBP12.72□□□□□ -0.37
HDAC6-222ENST00000478095 VPS37DQ86XT2 251 aa12.72□□□□□ -0.37
HDAC6-222ENST00000478095 SIRT2Q8IXJ6 389 aa12.72□□□□□ -0.37
HDAC6-222ENST00000478095 MICALL2Q8IY33 904 aa12.72□□□□□ -0.37
HDAC6-222ENST00000478095 LPIN2Q92539 896 aa12.72□□□□□ -0.37
HDAC6-222ENST00000478095 GPRC5DQ9NZD1 345 aa12.72□□□□□ -0.37
HDAC6-222ENST00000478095 TOMM70O94826 608 aa12.71□□□□□ -0.37
HDAC6-222ENST00000478095 SASH1O94885 1247 aa12.71□□□□□ -0.37
HDAC6-222ENST00000478095 IL1R1P14778 569 aa12.71□□□□□ -0.37
HDAC6-222ENST00000478095 ADORA1P30542 326 aa12.71□□□□□ -0.37
HDAC6-222ENST00000478095 CAVIN4Q5BKX8 364 aa12.71□□□□□ -0.37
HDAC6-222ENST00000478095 DACT2Q5SW24 774 aa12.71□□□□□ -0.37
HDAC6-222ENST00000478095 STRIP1Q5VSL9 837 aa12.71□□□□□ -0.37
HDAC6-222ENST00000478095 TTLL5Q6EMB2 1281 aa12.71□□□□□ -0.37
HDAC6-222ENST00000478095 CNOT7Q9UIV1 285 aaKnown RBP12.71□□□□□ -0.37
HDAC6-222ENST00000478095 EXOC6BQ9Y2D4 811 aa12.71□□□□□ -0.37
HDAC6-222ENST00000478095 RPS12P25398 132 aaKnown RBP12.7□□□□□ -0.38
HDAC6-222ENST00000478095 TIMM10P62072 90 aa12.7□□□□□ -0.38
HDAC6-222ENST00000478095 FBXO33Q7Z6M2 555 aa12.7□□□□□ -0.38
HDAC6-222ENST00000478095 RPAP2Q8IXW5 612 aaPredicted RBP12.7□□□□□ -0.38
HDAC6-222ENST00000478095 TRPM4Q8TD43 1214 aa12.7□□□□□ -0.38
HDAC6-222ENST00000478095 A0A1B0GUL6 1792 aa12.69□□□□□ -0.38
HDAC6-222ENST00000478095 A0A1B0GUL7 405 aa12.69□□□□□ -0.38
HDAC6-222ENST00000478095 APBB1O00213 710 aa12.69□□□□□ -0.38
HDAC6-222ENST00000478095 HMMRO75330 724 aa12.69□□□□□ -0.38
HDAC6-222ENST00000478095 FRAT2O75474 233 aaPredicted RBP12.69□□□□□ -0.38
HDAC6-222ENST00000478095 EGFRP00533 1210 aa12.69□□□□□ -0.38
HDAC6-222ENST00000478095 C1QTNF8P60827 252 aa12.69□□□□□ -0.38
HDAC6-222ENST00000478095 CHAF1AQ13111 956 aaPredicted RBP12.69□□□□□ -0.38
HDAC6-222ENST00000478095 RBM26Q5T8P6 1007 aaKnown RBP12.69□□□□□ -0.38
HDAC6-222ENST00000478095 SAMD7Q7Z3H4 446 aa12.69□□□□□ -0.38
HDAC6-222ENST00000478095 CERS5Q8N5B7 392 aa12.69□□□□□ -0.38
HDAC6-222ENST00000478095 AGBL3Q8NEM8 1001 aa12.69□□□□□ -0.38
HDAC6-222ENST00000478095 TDRD7Q8NHU6 1098 aaKnown RBP12.69□□□□□ -0.38
HDAC6-222ENST00000478095 DPF2Q92785 391 aa12.69□□□□□ -0.38
HDAC6-222ENST00000478095 NEUROD6Q96NK8 337 aa12.69□□□□□ -0.38
HDAC6-222ENST00000478095 ADARB2Q9NS39 739 aaKnown RBP12.69□□□□□ -0.38
HDAC6-222ENST00000478095 NOP58Q9Y2X3 529 aaKnown RBP12.69□□□□□ -0.38
HDAC6-222ENST00000478095 F8W031 263 aaPredicted RBP12.68□□□□□ -0.38
HDAC6-222ENST00000478095 H7C1D1 291 aa12.68□□□□□ -0.38
HDAC6-222ENST00000478095 PHKA1P46020 1223 aa12.68□□□□□ -0.38
HDAC6-222ENST00000478095 TBC1D10BQ4KMP7 808 aaPredicted RBP12.68□□□□□ -0.38
HDAC6-222ENST00000478095 PNMA8AQ86V59 439 aaPredicted RBP12.68□□□□□ -0.38
HDAC6-222ENST00000478095 KIAA0825Q8IV33 1275 aa12.68□□□□□ -0.38
HDAC6-222ENST00000478095 RBM46Q8TBY0 533 aaKnown RBP12.68□□□□□ -0.38
HDAC6-222ENST00000478095 GMLQ99445 158 aa12.68□□□□□ -0.38
HDAC6-222ENST00000478095 BCL11AQ9H165 835 aa12.68□□□□□ -0.38
HDAC6-222ENST00000478095 AKAP2Q9Y2D5 859 aa12.68□□□□□ -0.38
HDAC6-222ENST00000478095 ZNF609O15014 1411 aa12.68□□□□□ -0.38
HDAC6-222ENST00000478095 SCN9AQ15858 1988 aa12.67□□□□□ -0.38
HDAC6-222ENST00000478095 USP17L8P0C7I0 530 aa12.67□□□□□ -0.38
HDAC6-222ENST00000478095 HIRAP54198 1017 aaPredicted RBP12.67□□□□□ -0.38
HDAC6-222ENST00000478095 IRX6P78412 446 aaPredicted RBP12.67□□□□□ -0.38
HDAC6-222ENST00000478095 TNNI3KQ59H18 835 aa12.67□□□□□ -0.38
HDAC6-222ENST00000478095 CCDC102BQ68D86 513 aa12.67□□□□□ -0.38
HDAC6-222ENST00000478095 USP50Q70EL3 339 aaPredicted RBP12.67□□□□□ -0.38
HDAC6-222ENST00000478095 LDHDQ86WU2 507 aa12.67□□□□□ -0.38
HDAC6-222ENST00000478095 SMC1BQ8NDV3 1235 aa12.67□□□□□ -0.38
HDAC6-222ENST00000478095 XAGE2Q96GT9 111 aa12.67□□□□□ -0.38
HDAC6-222ENST00000478095 PCDHB15Q9Y5E8 787 aa12.67□□□□□ -0.38
HDAC6-222ENST00000478095 FPGT-TNNI3KV9GXZ4 949 aa12.67□□□□□ -0.38
HDAC6-222ENST00000478095 MYO3BQ8WXR4 1341 aa12.66□□□□□ -0.38
HDAC6-222ENST00000478095 KIF4BQ2VIQ3 1234 aa12.66□□□□□ -0.38
HDAC6-222ENST00000478095 MFSD14BQ5SR56 506 aa12.66□□□□□ -0.38
HDAC6-222ENST00000478095 MAP1SQ66K74 1059 aaPredicted RBP12.66□□□□□ -0.38
HDAC6-222ENST00000478095 EXOC6Q8TAG9 804 aa12.66□□□□□ -0.38
HDAC6-222ENST00000478095 IL1RAPL2Q9NP60 686 aa12.66□□□□□ -0.38
HDAC6-222ENST00000478095 TLR7Q9NYK1 1049 aaKnown RBP12.66□□□□□ -0.38
HDAC6-222ENST00000478095 COL1A1P02452 1464 aaPredicted RBP12.65□□□□□ -0.38
HDAC6-222ENST00000478095 ASTN2O75129 1339 aaPredicted RBP12.65□□□□□ -0.38
HDAC6-222ENST00000478095 FAM205AQ6ZU69 1335 aa12.65□□□□□ -0.38
HDAC6-222ENST00000478095 ZNF280AP59817 542 aaPredicted RBP12.65□□□□□ -0.38
HDAC6-222ENST00000478095 GRIK5Q16478 980 aa12.65□□□□□ -0.38
HDAC6-222ENST00000478095 HSP90AB4PQ58FF6 505 aa12.65□□□□□ -0.38
HDAC6-222ENST00000478095 GORABQ5T7V8 394 aa12.65□□□□□ -0.38
HDAC6-222ENST00000478095 ERC1Q8IUD2 1116 aa12.65□□□□□ -0.38
HDAC6-222ENST00000478095 OGFOD1Q8N543 542 aa12.65□□□□□ -0.38
HDAC6-222ENST00000478095 DBNDD2Q9BQY9 259 aa12.65□□□□□ -0.38
HDAC6-222ENST00000478095 MYOZ2Q9NPC6 264 aa12.65□□□□□ -0.38
HDAC6-222ENST00000478095 FSTL1Q12841 308 aa12.64□□□□□ -0.39
HDAC6-222ENST00000478095 RASGRF1Q13972 1273 aa12.64□□□□□ -0.39
HDAC6-222ENST00000478095 RHPN1Q8TCX5 695 aa12.64□□□□□ -0.39
HDAC6-222ENST00000478095 EAF2Q96CJ1 260 aaPredicted RBP12.64□□□□□ -0.39
HDAC6-222ENST00000478095 CCDC8Q9H0W5 538 aaPredicted RBP12.64□□□□□ -0.39
HDAC6-222ENST00000478095 TSPYL2Q9H2G4 693 aaPredicted RBP12.64□□□□□ -0.39
HDAC6-222ENST00000478095 GPR108Q9NPR9 543 aa12.64□□□□□ -0.39
HDAC6-222ENST00000478095 GNL3LQ9NVN8 582 aaKnown RBP12.64□□□□□ -0.39
HDAC6-222ENST00000478095 FKBP1AP62942 108 aaKnown RBP12.63□□□□□ -0.39
HDAC6-222ENST00000478095 PI16Q6UXB8 463 aa12.63□□□□□ -0.39
HDAC6-222ENST00000478095 AACSQ86V21 672 aa12.63□□□□□ -0.39
HDAC6-222ENST00000478095 KIF1BPQ96EK5 621 aa12.63□□□□□ -0.39
HDAC6-222ENST00000478095 DBNLQ9UJU6 430 aaKnown RBP12.63□□□□□ -0.39
HDAC6-222ENST00000478095 HDAC9Q9UKV0 1011 aa12.63□□□□□ -0.39
HDAC6-222ENST00000478095 TTF2Q9UNY4 1162 aaKnown RBP12.63□□□□□ -0.39
HDAC6-222ENST00000478095 PCDHAC2Q9Y5I4 1007 aa12.63□□□□□ -0.39
HDAC6-222ENST00000478095 SCN4AP35499 1836 aa12.62□□□□□ -0.39
HDAC6-222ENST00000478095 FMR1Q06787 632 aaKnown RBP eCLIP12.62□□□□□ -0.39
HDAC6-222ENST00000478095 SCARF1Q14162 830 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms