RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 TOMM70O94826 608 aa3.61□□□□□ -1.83
HMGN4-202ENST00000477243 CCNYL3P0C7X3 344 aa3.61□□□□□ -1.83
HMGN4-202ENST00000477243 ITGB8P26012 769 aa3.61□□□□□ -1.83
HMGN4-202ENST00000477243 EIF4A3P38919 411 aaKnown RBP3.61□□□□□ -1.83
HMGN4-202ENST00000477243 STAT3P40763 770 aa3.61□□□□□ -1.83
HMGN4-202ENST00000477243 MRE11P49959 708 aa3.61□□□□□ -1.83
HMGN4-202ENST00000477243 RIPPLY3P57055 190 aa3.61□□□□□ -1.83
HMGN4-202ENST00000477243 SQSTM1Q13501 440 aa3.61□□□□□ -1.83
HMGN4-202ENST00000477243 R3HDM1Q15032 1099 aaKnown RBP3.61□□□□□ -1.83
HMGN4-202ENST00000477243 MEI1Q5TIA1 1274 aa3.61□□□□□ -1.83
HMGN4-202ENST00000477243 ICE2Q659A1 982 aa3.61□□□□□ -1.83
HMGN4-202ENST00000477243 TTLL5Q6EMB2 1281 aa3.61□□□□□ -1.83
HMGN4-202ENST00000477243 CCDC70Q6NSX1 233 aa3.61□□□□□ -1.83
HMGN4-202ENST00000477243 SLC4A10Q6U841 1118 aa3.61□□□□□ -1.83
HMGN4-202ENST00000477243 KSR2Q6VAB6 950 aa3.61□□□□□ -1.83
HMGN4-202ENST00000477243 DDX42Q86XP3 938 aaKnown RBP eCLIP3.61□□□□□ -1.83
HMGN4-202ENST00000477243 JAMLQ86YT9 394 aa3.61□□□□□ -1.83
HMGN4-202ENST00000477243 DRC7Q8IY82 874 aa3.61□□□□□ -1.83
HMGN4-202ENST00000477243 NKX2-3Q8TAU0 364 aa3.61□□□□□ -1.83
HMGN4-202ENST00000477243 NANOS1Q8WY41 292 aaKnown RBP3.61□□□□□ -1.83
HMGN4-202ENST00000477243 ANAPC16Q96DE5 110 aa3.61□□□□□ -1.83
HMGN4-202ENST00000477243 MYO19Q96H55 970 aa3.61□□□□□ -1.83
HMGN4-202ENST00000477243 HNRNPABQ99729 332 aaKnown RBP3.61□□□□□ -1.83
HMGN4-202ENST00000477243 COPRSQ9NQ92 184 aa3.61□□□□□ -1.83
HMGN4-202ENST00000477243 ENAMQ9NRM1 1142 aa3.61□□□□□ -1.83
HMGN4-202ENST00000477243 GINM1Q9NU53 330 aa3.61□□□□□ -1.83
HMGN4-202ENST00000477243 NRBP1Q9UHY1 535 aa3.61□□□□□ -1.83
HMGN4-202ENST00000477243 PCDHB11Q9Y5F2 797 aa3.61□□□□□ -1.83
HMGN4-202ENST00000477243 RALGAPBQ86X10 1494 aa3.6□□□□□ -1.83
HMGN4-202ENST00000477243 SCAF11Q99590 1463 aaKnown RBP3.6□□□□□ -1.83
HMGN4-202ENST00000477243 EYSQ5T1H1 3165 aa3.6□□□□□ -1.83
HMGN4-202ENST00000477243 TCERG1O14776 1098 aaKnown RBP3.6□□□□□ -1.83
HMGN4-202ENST00000477243 ACTN4O43707 911 aaKnown RBP3.6□□□□□ -1.83
HMGN4-202ENST00000477243 ASMTLO95671 621 aa3.6□□□□□ -1.83
HMGN4-202ENST00000477243 PDGFAP04085 211 aa3.6□□□□□ -1.83
HMGN4-202ENST00000477243 MYL3P08590 195 aa3.6□□□□□ -1.83
HMGN4-202ENST00000477243 USP17L7P0C7H9 530 aa3.6□□□□□ -1.83
HMGN4-202ENST00000477243 U2AF1L5P0DN76 240 aaPredicted RBP3.6□□□□□ -1.83
HMGN4-202ENST00000477243 U2AF1Q01081 240 aaKnown RBP eCLIP3.6□□□□□ -1.83
HMGN4-202ENST00000477243 ORC1Q13415 861 aa3.6□□□□□ -1.83
HMGN4-202ENST00000477243 FXNQ16595 210 aa3.6□□□□□ -1.83
HMGN4-202ENST00000477243 DDR2Q16832 855 aa3.6□□□□□ -1.83
HMGN4-202ENST00000477243 GFOD2Q3B7J2 385 aa3.6□□□□□ -1.83
HMGN4-202ENST00000477243 GRAMD1BQ3KR37 738 aa3.6□□□□□ -1.83
HMGN4-202ENST00000477243 MTERF2Q49AM1 385 aa3.6□□□□□ -1.83
HMGN4-202ENST00000477243 INO80DQ53TQ3 878 aaPredicted RBP3.6□□□□□ -1.83
HMGN4-202ENST00000477243 ZC3H12BQ5HYM0 836 aaKnown RBP3.6□□□□□ -1.83
HMGN4-202ENST00000477243 BRICD5Q6PL45 260 aa3.6□□□□□ -1.83
HMGN4-202ENST00000477243 HDGFL2Q7Z4V5 671 aaPredicted RBP3.6□□□□□ -1.83
HMGN4-202ENST00000477243 C14orf80Q86SX3 495 aa3.6□□□□□ -1.83
HMGN4-202ENST00000477243 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.6□□□□□ -1.83
HMGN4-202ENST00000477243 RAVER1Q8IY67 606 aaKnown RBP3.6□□□□□ -1.83
HMGN4-202ENST00000477243 C1orf131Q8NDD1 294 aaKnown RBP3.6□□□□□ -1.83
HMGN4-202ENST00000477243 TTC8Q8TAM2 541 aa3.6□□□□□ -1.83
HMGN4-202ENST00000477243 ZNF296Q8WUU4 475 aaPredicted RBP3.6□□□□□ -1.83
HMGN4-202ENST00000477243 SNRNP27Q8WVK2 155 aaKnown RBP3.6□□□□□ -1.83
HMGN4-202ENST00000477243 EDEM1Q92611 657 aa3.6□□□□□ -1.83
HMGN4-202ENST00000477243 NINJ1Q92982 152 aa3.6□□□□□ -1.83
HMGN4-202ENST00000477243 EMID1Q96A84 441 aaPredicted RBP3.6□□□□□ -1.83
HMGN4-202ENST00000477243 ZNF669Q96BR6 464 aaPredicted RBP3.6□□□□□ -1.83
HMGN4-202ENST00000477243 MFSD3Q96ES6 412 aa3.6□□□□□ -1.83
HMGN4-202ENST00000477243 CAMKK2Q96RR4 588 aa3.6□□□□□ -1.83
HMGN4-202ENST00000477243 C2orf49Q9BVC5 232 aaPredicted RBP3.6□□□□□ -1.83
HMGN4-202ENST00000477243 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.6□□□□□ -1.83
HMGN4-202ENST00000477243 OSBPL7Q9BZF2 842 aa3.6□□□□□ -1.83
HMGN4-202ENST00000477243 KIAA1468Q9P260 1216 aa3.6□□□□□ -1.83
HMGN4-202ENST00000477243 LZTS1Q9Y250 596 aa3.6□□□□□ -1.83
HMGN4-202ENST00000477243 LEMD3Q9Y2U8 911 aa3.6□□□□□ -1.83
HMGN4-202ENST00000477243 ITPR3Q14573 2671 aa3.6□□□□□ -1.83
HMGN4-202ENST00000477243 FAM208BQ5VWN6 2430 aa3.6□□□□□ -1.83
HMGN4-202ENST00000477243 CFTRP13569 1480 aa3.6□□□□□ -1.83
HMGN4-202ENST00000477243 ZCCHC6Q5VYS8 1495 aaKnown RBP3.6□□□□□ -1.83
HMGN4-202ENST00000477243 ALKQ9UM73 1620 aa3.59□□□□□ -1.83
HMGN4-202ENST00000477243 A0A1W2PRU2 124 aa3.59□□□□□ -1.83
HMGN4-202ENST00000477243 POTECB2RU33 542 aa3.59□□□□□ -1.83
HMGN4-202ENST00000477243 OPLAHO14841 1288 aa3.59□□□□□ -1.83
HMGN4-202ENST00000477243 RIMBP2O15034 1052 aa3.59□□□□□ -1.83
HMGN4-202ENST00000477243 ZBTB39O15060 712 aa3.59□□□□□ -1.83
HMGN4-202ENST00000477243 SMAD7O15105 426 aaKnown RBP3.59□□□□□ -1.83
HMGN4-202ENST00000477243 ATMINO43313 823 aaPredicted RBP3.59□□□□□ -1.83
HMGN4-202ENST00000477243 EPB41L2O43491 1005 aaKnown RBP3.59□□□□□ -1.83
HMGN4-202ENST00000477243 TIMM44O43615 452 aa3.59□□□□□ -1.83
HMGN4-202ENST00000477243 IFIT2P09913 472 aaKnown RBP3.59□□□□□ -1.83
HMGN4-202ENST00000477243 NUDT7P0C024 238 aa3.59□□□□□ -1.83
HMGN4-202ENST00000477243 MYCLP1P12525 358 aaPredicted RBP3.59□□□□□ -1.83
HMGN4-202ENST00000477243 VARSP26640 1264 aaKnown RBP3.59□□□□□ -1.83
HMGN4-202ENST00000477243 GBP2P32456 591 aaPredicted RBP3.59□□□□□ -1.83
HMGN4-202ENST00000477243 PPM1FP49593 454 aaPredicted RBP3.59□□□□□ -1.83
HMGN4-202ENST00000477243 GUCY2FP51841 1108 aa3.59□□□□□ -1.83
HMGN4-202ENST00000477243 RASSF7Q02833 373 aa3.59□□□□□ -1.83
HMGN4-202ENST00000477243 MCL1Q07820 350 aa3.59□□□□□ -1.83
HMGN4-202ENST00000477243 C11orf91Q3C1V1 193 aa3.59□□□□□ -1.83
HMGN4-202ENST00000477243 TKFCQ3LXA3 575 aa3.59□□□□□ -1.83
HMGN4-202ENST00000477243 C8orf34Q49A92 452 aa3.59□□□□□ -1.83
HMGN4-202ENST00000477243 TM4SF20Q53R12 229 aa3.59□□□□□ -1.83
HMGN4-202ENST00000477243 ALFQ53S48 1182 aa3.59□□□□□ -1.83
HMGN4-202ENST00000477243 PERM1Q5SV97 790 aa3.59□□□□□ -1.83
HMGN4-202ENST00000477243 C10orf62Q5T681 223 aaPredicted RBP3.59□□□□□ -1.83
HMGN4-202ENST00000477243 ACBD5Q5T8D3 534 aaPredicted RBP3.59□□□□□ -1.83
HMGN4-202ENST00000477243 PCNX4Q63HM2 1172 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms