RNA–Protein interactions for RNA: ENST00000476931.1

RPN1-202, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 526 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-202ENST00000476931 A0A1B0GUL6 1792 aa20.75■□□□□ 0.91
RPN1-202ENST00000476931 APBB1O00213 710 aa20.75■□□□□ 0.91
RPN1-202ENST00000476931 IFIT2P09913 472 aaKnown RBP20.75■□□□□ 0.91
RPN1-202ENST00000476931 PHKA1P46020 1223 aa20.75■□□□□ 0.91
RPN1-202ENST00000476931 AACSQ86V21 672 aa20.75■□□□□ 0.91
RPN1-202ENST00000476931 FBXW7Q969H0 707 aa20.75■□□□□ 0.91
RPN1-202ENST00000476931 GMLQ99445 158 aa20.75■□□□□ 0.91
RPN1-202ENST00000476931 IL1RAPL2Q9NP60 686 aa20.75■□□□□ 0.91
RPN1-202ENST00000476931 ZNF609O15014 1411 aa20.75■□□□□ 0.91
RPN1-202ENST00000476931 PDS5AQ29RF7 1337 aaKnown RBP20.75■□□□□ 0.91
RPN1-202ENST00000476931 SCNN1DP51172 638 aa20.74■□□□□ 0.91
RPN1-202ENST00000476931 PNMA8AQ86V59 439 aaPredicted RBP20.74■□□□□ 0.91
RPN1-202ENST00000476931 TIAM2Q8IVF5 1701 aa20.74■□□□□ 0.91
RPN1-202ENST00000476931 OGFOD1Q8N543 542 aa20.74■□□□□ 0.91
RPN1-202ENST00000476931 CNOT7Q9UIV1 285 aaKnown RBP20.74■□□□□ 0.91
RPN1-202ENST00000476931 POTECB2RU33 542 aa20.73■□□□□ 0.91
RPN1-202ENST00000476931 USP17L8P0C7I0 530 aa20.73■□□□□ 0.91
RPN1-202ENST00000476931 ARID4AP29374 1257 aaPredicted RBP20.73■□□□□ 0.91
RPN1-202ENST00000476931 TTC39AQ5SRH9 613 aa20.73■□□□□ 0.91
RPN1-202ENST00000476931 ERICH6BQ5W0A0 696 aa20.73■□□□□ 0.91
RPN1-202ENST00000476931 ZGPATQ8N5A5 531 aaKnown RBP20.73■□□□□ 0.91
RPN1-202ENST00000476931 DBNDD2Q9BQY9 259 aa20.73■□□□□ 0.91
RPN1-202ENST00000476931 CCDC8Q9H0W5 538 aaPredicted RBP20.73■□□□□ 0.91
RPN1-202ENST00000476931 DBNLQ9UJU6 430 aaKnown RBP20.73■□□□□ 0.91
RPN1-202ENST00000476931 HDAC9Q9UKV0 1011 aa20.73■□□□□ 0.91
RPN1-202ENST00000476931 ZBTB12Q9Y330 459 aaPredicted RBP20.73■□□□□ 0.91
RPN1-202ENST00000476931 IGSF3O75054 1194 aa20.72■□□□□ 0.91
RPN1-202ENST00000476931 MFSD14BQ5SR56 506 aa20.72■□□□□ 0.91
RPN1-202ENST00000476931 USP50Q70EL3 339 aaPredicted RBP20.72■□□□□ 0.91
RPN1-202ENST00000476931 SMC5Q8IY18 1101 aa20.72■□□□□ 0.91
RPN1-202ENST00000476931 TAF1DQ9H5J8 278 aaPredicted RBP20.72■□□□□ 0.91
RPN1-202ENST00000476931 NMRK2Q9NPI5 230 aa20.72■□□□□ 0.91
RPN1-202ENST00000476931 ADARB2Q9NS39 739 aaKnown RBP20.72■□□□□ 0.91
RPN1-202ENST00000476931 IQSEC3Q9UPP2 1182 aaPredicted RBP20.72■□□□□ 0.91
RPN1-202ENST00000476931 EPHX2P34913 555 aa20.71■□□□□ 0.91
RPN1-202ENST00000476931 ZNF280AP59817 542 aaPredicted RBP20.71■□□□□ 0.91
RPN1-202ENST00000476931 C16orf71Q8IYS4 520 aaPredicted RBP20.71■□□□□ 0.91
RPN1-202ENST00000476931 MRIQ9BWK5 157 aa20.71■□□□□ 0.91
RPN1-202ENST00000476931 WDR90Q96KV7 1748 aa20.7■□□□□ 0.9
RPN1-202ENST00000476931 IGHDP01880 384 aa20.7■□□□□ 0.9
RPN1-202ENST00000476931 EPS15P42566 896 aa20.7■□□□□ 0.9
RPN1-202ENST00000476931 CHAF1AQ13111 956 aaPredicted RBP20.7■□□□□ 0.9
RPN1-202ENST00000476931 ANKRD45Q5TZF3 282 aa20.7■□□□□ 0.9
RPN1-202ENST00000476931 SPTY2D1Q68D10 685 aaPredicted RBP20.7■□□□□ 0.9
RPN1-202ENST00000476931 MICALL2Q8IY33 904 aa20.7■□□□□ 0.9
RPN1-202ENST00000476931 SALL1Q9NSC2 1324 aa20.7■□□□□ 0.9
RPN1-202ENST00000476931 RASGRF1Q13972 1273 aa20.69■□□□□ 0.9
RPN1-202ENST00000476931 SPATA5Q8NB90 893 aa20.69■□□□□ 0.9
RPN1-202ENST00000476931 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.69■□□□□ 0.9
RPN1-202ENST00000476931 GPATCH3Q96I76 525 aa20.69■□□□□ 0.9
RPN1-202ENST00000476931 KIF3CO14782 793 aa20.68■□□□□ 0.9
RPN1-202ENST00000476931 HDLBPQ00341 1268 aaKnown RBP20.68■□□□□ 0.9
RPN1-202ENST00000476931 CERS5Q8N5B7 392 aa20.68■□□□□ 0.9
RPN1-202ENST00000476931 HMG20BQ9P0W2 317 aa20.68■□□□□ 0.9
RPN1-202ENST00000476931 SCN9AQ15858 1988 aa20.67■□□□□ 0.9
RPN1-202ENST00000476931 SMARCA5O60264 1052 aaPredicted RBP20.67■□□□□ 0.9
RPN1-202ENST00000476931 KIAA0825Q8IV33 1275 aa20.67■□□□□ 0.9
RPN1-202ENST00000476931 ZC3H15Q8WU90 426 aaKnown RBP20.67■□□□□ 0.9
RPN1-202ENST00000476931 MXD3Q9BW11 206 aa20.67■□□□□ 0.9
RPN1-202ENST00000476931 TLR7Q9NYK1 1049 aaKnown RBP20.67■□□□□ 0.9
RPN1-202ENST00000476931 MAST3O60307 1309 aa20.67■□□□□ 0.9
RPN1-202ENST00000476931 TOMM70O94826 608 aa20.66■□□□□ 0.9
RPN1-202ENST00000476931 ATP5JP18859 108 aa20.66■□□□□ 0.9
RPN1-202ENST00000476931 MTMR14Q8NCE2 650 aa20.66■□□□□ 0.9
RPN1-202ENST00000476931 MYOZ2Q9NPC6 264 aa20.66■□□□□ 0.9
RPN1-202ENST00000476931 SERPINA10Q9UK55 444 aa20.66■□□□□ 0.9
RPN1-202ENST00000476931 JAG2Q9Y219 1238 aa20.66■□□□□ 0.9
RPN1-202ENST00000476931 SCN4AP35499 1836 aa20.66■□□□□ 0.9
RPN1-202ENST00000476931 LDHBP07195 334 aaKnown RBP20.65■□□□□ 0.9
RPN1-202ENST00000476931 MCAMP43121 646 aa20.65■□□□□ 0.9
RPN1-202ENST00000476931 LDHDQ86WU2 507 aa20.65■□□□□ 0.9
RPN1-202ENST00000476931 ECHDC1Q9NTX5 307 aa20.65■□□□□ 0.9
RPN1-202ENST00000476931 TTF2Q9UNY4 1162 aaKnown RBP20.65■□□□□ 0.9
RPN1-202ENST00000476931 NUCB1Q02818 461 aa20.64■□□□□ 0.89
RPN1-202ENST00000476931 TMED8Q6PL24 325 aaPredicted RBP20.64■□□□□ 0.89
RPN1-202ENST00000476931 SLF2Q8IX21 1173 aa20.64■□□□□ 0.89
RPN1-202ENST00000476931 BCL11AQ9H165 835 aa20.64■□□□□ 0.89
RPN1-202ENST00000476931 PGAP2Q9UHJ9 254 aa20.64■□□□□ 0.89
RPN1-202ENST00000476931 PSME4Q14997 1843 aa20.64■□□□□ 0.89
RPN1-202ENST00000476931 ARAP2Q8WZ64 1704 aa20.64■□□□□ 0.89
RPN1-202ENST00000476931 TTC41PQ6P2S7 1318 aa20.63■□□□□ 0.89
RPN1-202ENST00000476931 TTF1Q15361 905 aaPredicted RBP20.63■□□□□ 0.89
RPN1-202ENST00000476931 DLGAP5Q15398 846 aa20.63■□□□□ 0.89
RPN1-202ENST00000476931 KIF4BQ2VIQ3 1234 aa20.63■□□□□ 0.89
RPN1-202ENST00000476931 EAPPQ56P03 285 aaPredicted RBP20.63■□□□□ 0.89
RPN1-202ENST00000476931 ERICH6Q7L0X2 663 aa20.63■□□□□ 0.89
RPN1-202ENST00000476931 CHD1LQ86WJ1 897 aa20.63■□□□□ 0.89
RPN1-202ENST00000476931 RBM46Q8TBY0 533 aaKnown RBP20.63■□□□□ 0.89
RPN1-202ENST00000476931 ERC2O15083 957 aa20.62■□□□□ 0.89
RPN1-202ENST00000476931 SCARF1Q14162 830 aa20.62■□□□□ 0.89
RPN1-202ENST00000476931 RBM26Q5T8P6 1007 aaKnown RBP20.62■□□□□ 0.89
RPN1-202ENST00000476931 HHIPL2Q6UWX4 724 aa20.62■□□□□ 0.89
RPN1-202ENST00000476931 SAMD7Q7Z3H4 446 aa20.62■□□□□ 0.89
RPN1-202ENST00000476931 ABCF2Q9UG63 623 aa20.62■□□□□ 0.89
RPN1-202ENST00000476931 CLEC11AQ9Y240 323 aa20.62■□□□□ 0.89
RPN1-202ENST00000476931 F8W031 263 aaPredicted RBP20.61■□□□□ 0.89
RPN1-202ENST00000476931 TBC1D10BQ4KMP7 808 aaPredicted RBP20.61■□□□□ 0.89
RPN1-202ENST00000476931 B4GALNT3Q6L9W6 998 aa20.61■□□□□ 0.89
RPN1-202ENST00000476931 SMC1BQ8NDV3 1235 aa20.61■□□□□ 0.89
RPN1-202ENST00000476931 TEKT1Q969V4 418 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms