RNA–Protein interactions for RNA: ENST00000476558.7

CCDC7-206, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 1,819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-206ENST00000476558 ST3GAL1Q11201 340 aa27.44■■□□□ 1.98
CCDC7-206ENST00000476558 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.44■■□□□ 1.98
CCDC7-206ENST00000476558 ZNF532Q9HCE3 1301 aa27.44■■□□□ 1.98
CCDC7-206ENST00000476558 A0A0G2JLW4 131 aa27.44■■□□□ 1.98
CCDC7-206ENST00000476558 PLSCR1O15162 318 aa27.44■■□□□ 1.98
CCDC7-206ENST00000476558 CTNNA3Q9UI47 895 aa27.44■■□□□ 1.98
CCDC7-206ENST00000476558 HMGB1P09429 215 aaKnown RBP27.43■■□□□ 1.98
CCDC7-206ENST00000476558 TTLL5Q6EMB2 1281 aa27.43■■□□□ 1.98
CCDC7-206ENST00000476558 CNBD1Q8NA66 436 aa27.43■■□□□ 1.98
CCDC7-206ENST00000476558 TCEANC2Q96MN5 208 aa27.43■■□□□ 1.98
CCDC7-206ENST00000476558 FGAP02671 866 aa27.42■■□□□ 1.98
CCDC7-206ENST00000476558 GSE1Q14687 1217 aa27.42■■□□□ 1.98
CCDC7-206ENST00000476558 E7EWF7 191 aa27.41■■□□□ 1.98
CCDC7-206ENST00000476558 DEKP35659 375 aaKnown RBP27.41■■□□□ 1.98
CCDC7-206ENST00000476558 PRR5LQ6MZQ0 368 aa27.41■■□□□ 1.98
CCDC7-206ENST00000476558 EXOSC10Q01780 885 aaKnown RBP27.41■■□□□ 1.98
CCDC7-206ENST00000476558 MAP3K12Q12852 859 aa27.41■■□□□ 1.98
CCDC7-206ENST00000476558 ANKRD2Q9GZV1 360 aa27.41■■□□□ 1.98
CCDC7-206ENST00000476558 GYG1P46976 350 aa27.4■■□□□ 1.98
CCDC7-206ENST00000476558 DHX32Q7L7V1 743 aaKnown RBP27.4■■□□□ 1.98
CCDC7-206ENST00000476558 CCDC83Q8IWF9 413 aa27.4■■□□□ 1.98
CCDC7-206ENST00000476558 FAM84BQ96KN1 310 aaPredicted RBP27.4■■□□□ 1.98
CCDC7-206ENST00000476558 TRAK2O60296 914 aa27.39■■□□□ 1.98
CCDC7-206ENST00000476558 PTMSP20962 102 aa27.39■■□□□ 1.98
CCDC7-206ENST00000476558 FBXO33Q7Z6M2 555 aa27.39■■□□□ 1.98
CCDC7-206ENST00000476558 AGXT2Q9BYV1 514 aa27.39■■□□□ 1.97
CCDC7-206ENST00000476558 GNL3LQ9NVN8 582 aaKnown RBP27.39■■□□□ 1.97
CCDC7-206ENST00000476558 STRBPQ96SI9 672 aaKnown RBP27.38■■□□□ 1.97
CCDC7-206ENST00000476558 COL1A1P02452 1464 aaPredicted RBP27.37■■□□□ 1.97
CCDC7-206ENST00000476558 NPHP1O15259 732 aa27.37■■□□□ 1.97
CCDC7-206ENST00000476558 IMMTQ16891 758 aaKnown RBP27.37■■□□□ 1.97
CCDC7-206ENST00000476558 CAVIN4Q5BKX8 364 aa27.37■■□□□ 1.97
CCDC7-206ENST00000476558 Q6ZUG5 572 aa27.37■■□□□ 1.97
CCDC7-206ENST00000476558 MAGEB6Q8N7X4 407 aa27.37■■□□□ 1.97
CCDC7-206ENST00000476558 SMC3Q9UQE7 1217 aa27.37■■□□□ 1.97
CCDC7-206ENST00000476558 ZBTB22O15209 634 aa27.37■■□□□ 1.97
CCDC7-206ENST00000476558 SERPINB2P05120 415 aa27.37■■□□□ 1.97
CCDC7-206ENST00000476558 CRY2Q49AN0 593 aa27.37■■□□□ 1.97
CCDC7-206ENST00000476558 NECAB1Q8N987 351 aa27.37■■□□□ 1.97
CCDC7-206ENST00000476558 GRAPQ13588 217 aa27.36■■□□□ 1.97
CCDC7-206ENST00000476558 GRAPLQ8TC17 118 aaPredicted RBP27.36■■□□□ 1.97
CCDC7-206ENST00000476558 IRS2Q9Y4H2 1338 aa27.35■■□□□ 1.97
CCDC7-206ENST00000476558 RXRBP28702 533 aa27.35■■□□□ 1.97
CCDC7-206ENST00000476558 ALX1Q15699 326 aa27.35■■□□□ 1.97
CCDC7-206ENST00000476558 FBXL16Q8N461 479 aa27.35■■□□□ 1.97
CCDC7-206ENST00000476558 AKT1S1Q96B36 256 aa27.35■■□□□ 1.97
CCDC7-206ENST00000476558 WDR33Q9C0J8 1336 aaKnown RBP27.34■■□□□ 1.97
CCDC7-206ENST00000476558 GOLGA6L22H0YM25 854 aa27.34■■□□□ 1.97
CCDC7-206ENST00000476558 SEMA3EO15041 775 aa27.34■■□□□ 1.97
CCDC7-206ENST00000476558 DDR1Q08345 913 aa27.34■■□□□ 1.97
CCDC7-206ENST00000476558 DENND2AQ9ULE3 1009 aa27.34■■□□□ 1.97
CCDC7-206ENST00000476558 IQSEC3Q9UPP2 1182 aaPredicted RBP27.34■■□□□ 1.97
CCDC7-206ENST00000476558 ZMYM6O95789 1325 aa27.33■■□□□ 1.97
CCDC7-206ENST00000476558 PDS5AQ29RF7 1337 aaKnown RBP27.33■■□□□ 1.97
CCDC7-206ENST00000476558 KLRK1P26718 216 aa27.33■■□□□ 1.97
CCDC7-206ENST00000476558 ZNF827Q17R98 1081 aa27.33■■□□□ 1.97
CCDC7-206ENST00000476558 AIDAQ96BJ3 306 aa27.33■■□□□ 1.97
CCDC7-206ENST00000476558 POLRMTO00411 1230 aaKnown RBP27.32■■□□□ 1.96
CCDC7-206ENST00000476558 APBA3O96018 575 aa27.32■■□□□ 1.96
CCDC7-206ENST00000476558 SYT1P21579 422 aa27.32■■□□□ 1.96
CCDC7-206ENST00000476558 GJB2P29033 226 aa27.32■■□□□ 1.96
CCDC7-206ENST00000476558 SKOR2Q2VWA4 1001 aaPredicted RBP27.32■■□□□ 1.96
CCDC7-206ENST00000476558 ST5P78524 1137 aa27.32■■□□□ 1.96
CCDC7-206ENST00000476558 LRP2BPQ9P2M1 347 aa27.32■■□□□ 1.96
CCDC7-206ENST00000476558 PNPLA7Q6ZV29 1317 aa27.31■■□□□ 1.96
CCDC7-206ENST00000476558 PATL2C9JE40 543 aaKnown RBP27.31■■□□□ 1.96
CCDC7-206ENST00000476558 ZNF213O14771 459 aa27.31■■□□□ 1.96
CCDC7-206ENST00000476558 HAND2P61296 217 aa27.31■■□□□ 1.96
CCDC7-206ENST00000476558 MCTP1Q6DN14 999 aa27.31■■□□□ 1.96
CCDC7-206ENST00000476558 NBPF3Q9H094 633 aa27.31■■□□□ 1.96
CCDC7-206ENST00000476558 KLRG2A4D1S0 409 aaPredicted RBP27.3■■□□□ 1.96
CCDC7-206ENST00000476558 VPS37DQ86XT2 251 aa27.3■■□□□ 1.96
CCDC7-206ENST00000476558 BRF1Q92994 677 aa27.3■■□□□ 1.96
CCDC7-206ENST00000476558 GTF3C6Q969F1 213 aa27.3■■□□□ 1.96
CCDC7-206ENST00000476558 LRRC2Q9BYS8 371 aa27.3■■□□□ 1.96
CCDC7-206ENST00000476558 CACNA1SQ13698 1873 aa27.3■■□□□ 1.96
CCDC7-206ENST00000476558 STX6O43752 255 aa27.3■■□□□ 1.96
CCDC7-206ENST00000476558 MBD4O95243 580 aa27.3■■□□□ 1.96
CCDC7-206ENST00000476558 LMBRD1Q9NUN5 540 aa27.3■■□□□ 1.96
CCDC7-206ENST00000476558 TNS1Q9HBL0 1735 aaKnown RBP27.29■■□□□ 1.96
CCDC7-206ENST00000476558 HIBADHP31937 336 aaKnown RBP27.29■■□□□ 1.96
CCDC7-206ENST00000476558 FOXD4L5Q5VV16 416 aaPredicted RBP27.29■■□□□ 1.96
CCDC7-206ENST00000476558 MB21D2Q8IYB1 491 aaPredicted RBP27.29■■□□□ 1.96
CCDC7-206ENST00000476558 FOXD4L4Q8WXT5 416 aaPredicted RBP27.29■■□□□ 1.96
CCDC7-206ENST00000476558 TFCP2L1Q9NZI6 479 aa27.29■■□□□ 1.96
CCDC7-206ENST00000476558 MYH13Q9UKX3 1938 aa27.28■■□□□ 1.96
CCDC7-206ENST00000476558 ZSCAN22P10073 491 aaPredicted RBP27.28■■□□□ 1.96
CCDC7-206ENST00000476558 EVCP57679 992 aa27.28■■□□□ 1.96
CCDC7-206ENST00000476558 LEMD3Q9Y2U8 911 aa27.28■■□□□ 1.96
CCDC7-206ENST00000476558 PFKFB2O60825 505 aa27.27■■□□□ 1.96
CCDC7-206ENST00000476558 HOXA10P31260 410 aaPredicted RBP27.27■■□□□ 1.96
CCDC7-206ENST00000476558 RPGRQ92834 1020 aaKnown RBP27.27■■□□□ 1.96
CCDC7-206ENST00000476558 ARMT1Q9H993 441 aa27.27■■□□□ 1.96
CCDC7-206ENST00000476558 EPB41L4AQ9HCS5 686 aaPredicted RBP27.27■■□□□ 1.96
CCDC7-206ENST00000476558 RGS17Q9UGC6 210 aaPredicted RBP27.27■■□□□ 1.96
CCDC7-206ENST00000476558 RGPD3A6NKT7 1758 aaPredicted RBP27.27■■□□□ 1.96
CCDC7-206ENST00000476558 RGPD4Q7Z3J3 1758 aa27.27■■□□□ 1.96
CCDC7-206ENST00000476558 GSG1L2A8MUP6 293 aa27.27■■□□□ 1.96
CCDC7-206ENST00000476558 TXNRD3Q86VQ6 643 aa27.27■■□□□ 1.96
CCDC7-206ENST00000476558 COL23A1Q86Y22 540 aaPredicted RBP27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms