RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 A0A1W2PP55 124 aa8.79□□□□□ -1
LTN1-204ENST00000475344 SOX1O00570 391 aaPredicted RBP8.79□□□□□ -1
LTN1-204ENST00000475344 CPNE3O75131 537 aaKnown RBP8.79□□□□□ -1
LTN1-204ENST00000475344 KIAA1211Q6ZU35 1233 aa8.79□□□□□ -1
LTN1-204ENST00000475344 VN1R5Q7Z5H4 357 aa8.79□□□□□ -1
LTN1-204ENST00000475344 GALNT12Q8IXK2 581 aa8.79□□□□□ -1
LTN1-204ENST00000475344 DZIP1LQ8IYY4 767 aaKnown RBP8.79□□□□□ -1
LTN1-204ENST00000475344 WNT8BQ93098 351 aa8.79□□□□□ -1
LTN1-204ENST00000475344 BHLHE41Q9C0J9 482 aaPredicted RBP8.79□□□□□ -1
LTN1-204ENST00000475344 LIN7BQ9HAP6 207 aa8.79□□□□□ -1
LTN1-204ENST00000475344 NPHS2Q9NP85 383 aa8.79□□□□□ -1
LTN1-204ENST00000475344 GPR182O15218 404 aa8.78□□□□□ -1
LTN1-204ENST00000475344 PRR23CQ6ZRP0 262 aa8.78□□□□□ -1
LTN1-204ENST00000475344 CITED4Q96RK1 184 aa8.78□□□□□ -1
LTN1-204ENST00000475344 UBL7Q96S82 380 aaPredicted RBP8.78□□□□□ -1
LTN1-204ENST00000475344 USP26Q9BXU7 913 aa8.78□□□□□ -1
LTN1-204ENST00000475344 CEP41Q9BYV8 373 aa8.78□□□□□ -1
LTN1-204ENST00000475344 EHD4Q9H223 541 aa8.78□□□□□ -1
LTN1-204ENST00000475344 SCO2A0A1W2PP80 73 aa8.77□□□□□ -1.01
LTN1-204ENST00000475344 RUSC1Q9BVN2 902 aa8.77□□□□□ -1.01
LTN1-204ENST00000475344 GNEQ9Y223 722 aaKnown RBP8.77□□□□□ -1.01
LTN1-204ENST00000475344 A0A096LPE4 126 aa8.76□□□□□ -1.01
LTN1-204ENST00000475344 A0A1W2PPZ6 126 aa8.76□□□□□ -1.01
LTN1-204ENST00000475344 EIF1AYO14602 144 aaKnown RBP8.76□□□□□ -1.01
LTN1-204ENST00000475344 SART1O43290 800 aaKnown RBP8.76□□□□□ -1.01
LTN1-204ENST00000475344 GSTM4Q03013 218 aa8.76□□□□□ -1.01
LTN1-204ENST00000475344 SPRED3Q2MJR0 410 aa8.76□□□□□ -1.01
LTN1-204ENST00000475344 Q6ZS46 218 aa8.76□□□□□ -1.01
LTN1-204ENST00000475344 DMRTB1Q96MA1 342 aa8.76□□□□□ -1.01
LTN1-204ENST00000475344 GADD45BO75293 160 aaPredicted RBP8.75□□□□□ -1.01
LTN1-204ENST00000475344 ESRRAP11474 423 aaPredicted RBP8.75□□□□□ -1.01
LTN1-204ENST00000475344 MAPK1P28482 360 aa8.75□□□□□ -1.01
LTN1-204ENST00000475344 GRIA4P48058 902 aa8.75□□□□□ -1.01
LTN1-204ENST00000475344 CCNJLQ8IV13 435 aa8.75□□□□□ -1.01
LTN1-204ENST00000475344 UTP4Q969X6 686 aaKnown RBP8.75□□□□□ -1.01
LTN1-204ENST00000475344 TCF12Q99081 682 aa8.75□□□□□ -1.01
LTN1-204ENST00000475344 RNF208Q9H0X6 261 aa8.75□□□□□ -1.01
LTN1-204ENST00000475344 IVNS1ABPQ9Y6Y0 642 aa8.75□□□□□ -1.01
LTN1-204ENST00000475344 FDX2Q6P4F2 183 aa8.74□□□□□ -1.01
LTN1-204ENST00000475344 Q8N3U1 123 aa8.74□□□□□ -1.01
LTN1-204ENST00000475344 CCDC74AQ96AQ1 378 aa8.74□□□□□ -1.01
LTN1-204ENST00000475344 RBCK1Q9BYM8 510 aa8.74□□□□□ -1.01
LTN1-204ENST00000475344 DCTN4Q9UJW0 460 aa8.74□□□□□ -1.01
LTN1-204ENST00000475344 PCDH1Q08174 1060 aa8.73□□□□□ -1.01
LTN1-204ENST00000475344 TMC7Q7Z402 723 aa8.73□□□□□ -1.01
LTN1-204ENST00000475344 DHX15O43143 795 aaKnown RBP8.72□□□□□ -1.01
LTN1-204ENST00000475344 KIAA0319Q5VV43 1072 aa8.72□□□□□ -1.01
LTN1-204ENST00000475344 ARMC10Q8N2F6 343 aa8.72□□□□□ -1.01
LTN1-204ENST00000475344 CSRNP1Q96S65 589 aa8.72□□□□□ -1.01
LTN1-204ENST00000475344 DNAJC25Q9H1X3 360 aa8.72□□□□□ -1.01
LTN1-204ENST00000475344 CLEC4MQ9H2X3 399 aaPredicted RBP8.72□□□□□ -1.01
LTN1-204ENST00000475344 STOML1Q9UBI4 398 aa8.72□□□□□ -1.01
LTN1-204ENST00000475344 RAXQ9Y2V3 346 aa8.72□□□□□ -1.01
LTN1-204ENST00000475344 IGHA2P01877 340 aa8.71□□□□□ -1.02
LTN1-204ENST00000475344 FSTP19883 344 aa8.71□□□□□ -1.02
LTN1-204ENST00000475344 PREPP48147 710 aa8.71□□□□□ -1.02
LTN1-204ENST00000475344 NUTM2GQ5VZR2 741 aa8.71□□□□□ -1.02
LTN1-204ENST00000475344 KCNF1Q9H3M0 494 aa8.71□□□□□ -1.02
LTN1-204ENST00000475344 LOC100289279A0A1B0GTE1 492 aa8.7□□□□□ -1.02
LTN1-204ENST00000475344 GAS2O43903 313 aaKnown RBP8.7□□□□□ -1.02
LTN1-204ENST00000475344 ZNF423Q2M1K9 1284 aa8.7□□□□□ -1.02
LTN1-204ENST00000475344 UVSSAQ2YD98 709 aa8.7□□□□□ -1.02
LTN1-204ENST00000475344 ANKRD34AQ69YU3 496 aa8.7□□□□□ -1.02
LTN1-204ENST00000475344 EPS8L3Q8TE67 593 aaKnown RBP8.7□□□□□ -1.02
LTN1-204ENST00000475344 ALKBH8Q96BT7 664 aaKnown RBP8.7□□□□□ -1.02
LTN1-204ENST00000475344 FAM46AQ96IP4 442 aaKnown RBP8.7□□□□□ -1.02
LTN1-204ENST00000475344 SOX17Q9H6I2 414 aaPredicted RBP8.7□□□□□ -1.02
LTN1-204ENST00000475344 C12orf50Q8NA57 414 aaPredicted RBP8.69□□□□□ -1.02
LTN1-204ENST00000475344 BMP3P12645 472 aa8.68□□□□□ -1.02
LTN1-204ENST00000475344 KCNA1Q09470 495 aa8.68□□□□□ -1.02
LTN1-204ENST00000475344 XP32Q5T750 250 aa8.68□□□□□ -1.02
LTN1-204ENST00000475344 PI16Q6UXB8 463 aa8.68□□□□□ -1.02
LTN1-204ENST00000475344 MYRFLQ96LU7 910 aa8.68□□□□□ -1.02
LTN1-204ENST00000475344 ZNF576Q9H609 170 aa8.68□□□□□ -1.02
LTN1-204ENST00000475344 CYP4F12Q9HCS2 524 aa8.68□□□□□ -1.02
LTN1-204ENST00000475344 NLRP2Q9NX02 1062 aa8.68□□□□□ -1.02
LTN1-204ENST00000475344 DLGAP3O95886 979 aa8.67□□□□□ -1.02
LTN1-204ENST00000475344 RXRBP28702 533 aa8.67□□□□□ -1.02
LTN1-204ENST00000475344 ZNF157P51786 506 aaPredicted RBP8.67□□□□□ -1.02
LTN1-204ENST00000475344 TMPRSS13Q9BYE2 586 aa8.67□□□□□ -1.02
LTN1-204ENST00000475344 ABCB6Q9NP58 842 aa8.67□□□□□ -1.02
LTN1-204ENST00000475344 PNMA6FA0A0J9YX94 578 aa8.66□□□□□ -1.02
LTN1-204ENST00000475344 HMX2A2RU54 273 aa8.66□□□□□ -1.02
LTN1-204ENST00000475344 CYP11A1P05108 521 aa8.66□□□□□ -1.02
LTN1-204ENST00000475344 MAOBP27338 520 aa8.66□□□□□ -1.02
LTN1-204ENST00000475344 MAPK8P45983 427 aa8.66□□□□□ -1.02
LTN1-204ENST00000475344 PLCB3Q01970 1234 aa8.66□□□□□ -1.02
LTN1-204ENST00000475344 GRM2Q14416 872 aa8.66□□□□□ -1.02
LTN1-204ENST00000475344 POU4F3Q15319 338 aa8.66□□□□□ -1.02
LTN1-204ENST00000475344 EXOSC6Q5RKV6 272 aaKnown RBP8.66□□□□□ -1.02
LTN1-204ENST00000475344 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.66□□□□□ -1.02
LTN1-204ENST00000475344 TRIM42Q8IWZ5 723 aa8.66□□□□□ -1.02
LTN1-204ENST00000475344 FAM20CQ8IXL6 584 aa8.66□□□□□ -1.02
LTN1-204ENST00000475344 C7orf69Q9H7B7 122 aa8.66□□□□□ -1.02
LTN1-204ENST00000475344 TRAK1Q9UPV9 953 aa8.66□□□□□ -1.02
LTN1-204ENST00000475344 TMEM238LA0A1B0GVL6 79 aa8.65□□□□□ -1.02
LTN1-204ENST00000475344 MEGF11A6BM72 1044 aa8.65□□□□□ -1.02
LTN1-204ENST00000475344 IGLV1-40P01703 118 aa8.65□□□□□ -1.02
LTN1-204ENST00000475344 DRD2P14416 443 aa8.65□□□□□ -1.02
LTN1-204ENST00000475344 FCGRTP55899 365 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms