RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 TIMM10P62072 90 aa18.61■□□□□ 0.57
SNX13-205ENST00000471744 TNNI3KQ59H18 835 aa18.61■□□□□ 0.57
SNX13-205ENST00000471744 KIF1BPQ96EK5 621 aa18.61■□□□□ 0.57
SNX13-205ENST00000471744 XAGE2Q96GT9 111 aa18.61■□□□□ 0.57
SNX13-205ENST00000471744 NEUROD6Q96NK8 337 aa18.61■□□□□ 0.57
SNX13-205ENST00000471744 ZBTB12Q9Y330 459 aaPredicted RBP18.61■□□□□ 0.57
SNX13-205ENST00000471744 FPGT-TNNI3KV9GXZ4 949 aa18.61■□□□□ 0.57
SNX13-205ENST00000471744 EPS15P42566 896 aa18.6■□□□□ 0.57
SNX13-205ENST00000471744 GORABQ5T7V8 394 aa18.6■□□□□ 0.57
SNX13-205ENST00000471744 USP50Q70EL3 339 aaPredicted RBP18.6■□□□□ 0.57
SNX13-205ENST00000471744 MICALL2Q8IY33 904 aa18.6■□□□□ 0.57
SNX13-205ENST00000471744 RBM46Q8TBY0 533 aaKnown RBP18.6■□□□□ 0.57
SNX13-205ENST00000471744 TBC1D22AQ8WUA7 517 aa18.6■□□□□ 0.57
SNX13-205ENST00000471744 GMLQ99445 158 aa18.6■□□□□ 0.57
SNX13-205ENST00000471744 USP17L8P0C7I0 530 aa18.59■□□□□ 0.57
SNX13-205ENST00000471744 CCDC102BQ68D86 513 aa18.59■□□□□ 0.57
SNX13-205ENST00000471744 OGFOD1Q8N543 542 aa18.59■□□□□ 0.57
SNX13-205ENST00000471744 RHPN1Q8TCX5 695 aa18.59■□□□□ 0.57
SNX13-205ENST00000471744 PCDHB15Q9Y5E8 787 aa18.59■□□□□ 0.57
SNX13-205ENST00000471744 CENPBP07199 599 aaPredicted RBP18.58■□□□□ 0.56
SNX13-205ENST00000471744 ADORA1P30542 326 aa18.58■□□□□ 0.56
SNX13-205ENST00000471744 LDHDQ86WU2 507 aa18.58■□□□□ 0.56
SNX13-205ENST00000471744 CLASRPQ8N2M8 674 aaKnown RBP18.58■□□□□ 0.56
SNX13-205ENST00000471744 DCTPP1Q9H773 170 aa18.58■□□□□ 0.56
SNX13-205ENST00000471744 HDAC9Q9UKV0 1011 aa18.58■□□□□ 0.56
SNX13-205ENST00000471744 DENND2AQ9ULE3 1009 aa18.58■□□□□ 0.56
SNX13-205ENST00000471744 PDS5AQ29RF7 1337 aaKnown RBP18.57■□□□□ 0.56
SNX13-205ENST00000471744 PHKA1P46020 1223 aa18.57■□□□□ 0.56
SNX13-205ENST00000471744 ZNF280AP59817 542 aaPredicted RBP18.57■□□□□ 0.56
SNX13-205ENST00000471744 EAPPQ56P03 285 aaPredicted RBP18.57■□□□□ 0.56
SNX13-205ENST00000471744 MFSD14BQ5SR56 506 aa18.57■□□□□ 0.56
SNX13-205ENST00000471744 SMC1BQ8NDV3 1235 aa18.57■□□□□ 0.56
SNX13-205ENST00000471744 EXOC6Q8TAG9 804 aa18.57■□□□□ 0.56
SNX13-205ENST00000471744 WDR66Q8TBY9 1149 aa18.57■□□□□ 0.56
SNX13-205ENST00000471744 IQSEC3Q9UPP2 1182 aaPredicted RBP18.57■□□□□ 0.56
SNX13-205ENST00000471744 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.57■□□□□ 0.56
SNX13-205ENST00000471744 ADAMTSL1Q8N6G6 1762 aa18.57■□□□□ 0.56
SNX13-205ENST00000471744 UQCRFS1P1P0C7P4 283 aa18.56■□□□□ 0.56
SNX13-205ENST00000471744 FSTL1Q12841 308 aa18.56■□□□□ 0.56
SNX13-205ENST00000471744 CHAF1AQ13111 956 aaPredicted RBP18.56■□□□□ 0.56
SNX13-205ENST00000471744 CCDC158Q5M9N0 1113 aa18.56■□□□□ 0.56
SNX13-205ENST00000471744 SUGT1Q9Y2Z0 365 aa18.56■□□□□ 0.56
SNX13-205ENST00000471744 HDAC1Q13547 482 aaPredicted RBP18.55■□□□□ 0.56
SNX13-205ENST00000471744 AACSQ86V21 672 aa18.55■□□□□ 0.56
SNX13-205ENST00000471744 ZC3H15Q8WU90 426 aaKnown RBP18.55■□□□□ 0.56
SNX13-205ENST00000471744 EAF2Q96CJ1 260 aaPredicted RBP18.55■□□□□ 0.56
SNX13-205ENST00000471744 MXD3Q9BW11 206 aa18.55■□□□□ 0.56
SNX13-205ENST00000471744 LRRCC1Q9C099 1032 aa18.55■□□□□ 0.56
SNX13-205ENST00000471744 APBB1O00213 710 aa18.54■□□□□ 0.56
SNX13-205ENST00000471744 ARID4AP29374 1257 aaPredicted RBP18.54■□□□□ 0.56
SNX13-205ENST00000471744 KIF4BQ2VIQ3 1234 aa18.54■□□□□ 0.56
SNX13-205ENST00000471744 CHADLQ6NUI6 762 aa18.54■□□□□ 0.56
SNX13-205ENST00000471744 KIAA0825Q8IV33 1275 aa18.54■□□□□ 0.56
SNX13-205ENST00000471744 ZGPATQ8N5A5 531 aaKnown RBP18.54■□□□□ 0.56
SNX13-205ENST00000471744 CERS5Q8N5B7 392 aa18.54■□□□□ 0.56
SNX13-205ENST00000471744 ZNF512BQ96KM6 892 aaPredicted RBP18.54■□□□□ 0.56
SNX13-205ENST00000471744 DBNDD2Q9BQY9 259 aa18.54■□□□□ 0.56
SNX13-205ENST00000471744 IL1RAPL2Q9NP60 686 aa18.54■□□□□ 0.56
SNX13-205ENST00000471744 JAG2Q9Y219 1238 aa18.54■□□□□ 0.56
SNX13-205ENST00000471744 CLEC11AQ9Y240 323 aa18.54■□□□□ 0.56
SNX13-205ENST00000471744 MAST3O60307 1309 aa18.53■□□□□ 0.56
SNX13-205ENST00000471744 SALL1Q9NSC2 1324 aa18.53■□□□□ 0.56
SNX13-205ENST00000471744 SHTN1A0MZ66 631 aa18.53■□□□□ 0.56
SNX13-205ENST00000471744 TTC39AQ5SRH9 613 aa18.53■□□□□ 0.56
SNX13-205ENST00000471744 SAMD7Q7Z3H4 446 aa18.53■□□□□ 0.56
SNX13-205ENST00000471744 TRPM4Q8TD43 1214 aa18.53■□□□□ 0.56
SNX13-205ENST00000471744 RWDD1Q9H446 243 aaPredicted RBP18.53■□□□□ 0.56
SNX13-205ENST00000471744 MYOZ2Q9NPC6 264 aa18.53■□□□□ 0.56
SNX13-205ENST00000471744 DBNLQ9UJU6 430 aaKnown RBP18.53■□□□□ 0.56
SNX13-205ENST00000471744 POLR2AP24928 1970 aaKnown RBP18.53■□□□□ 0.56
SNX13-205ENST00000471744 AKAP11Q9UKA4 1901 aa18.53■□□□□ 0.56
SNX13-205ENST00000471744 ECM29Q5VYK3 1845 aa18.52■□□□□ 0.56
SNX13-205ENST00000471744 IFIT2P09913 472 aaKnown RBP18.52■□□□□ 0.56
SNX13-205ENST00000471744 RASGRF1Q13972 1273 aa18.52■□□□□ 0.56
SNX13-205ENST00000471744 TBC1D10BQ4KMP7 808 aaPredicted RBP18.52■□□□□ 0.56
SNX13-205ENST00000471744 GCC1Q96CN9 775 aa18.52■□□□□ 0.56
SNX13-205ENST00000471744 CCDC8Q9H0W5 538 aaPredicted RBP18.52■□□□□ 0.56
SNX13-205ENST00000471744 COL1A1P02452 1464 aaPredicted RBP18.52■□□□□ 0.55
SNX13-205ENST00000471744 C1QTNF8P60827 252 aa18.51■□□□□ 0.55
SNX13-205ENST00000471744 HDLBPQ00341 1268 aaKnown RBP18.51■□□□□ 0.55
SNX13-205ENST00000471744 ZBTB47Q9UFB7 747 aaPredicted RBP18.51■□□□□ 0.55
SNX13-205ENST00000471744 PGAP2Q9UHJ9 254 aa18.51■□□□□ 0.55
SNX13-205ENST00000471744 TTF2Q9UNY4 1162 aaKnown RBP18.51■□□□□ 0.55
SNX13-205ENST00000471744 POTEIP0CG38 1075 aa18.5■□□□□ 0.55
SNX13-205ENST00000471744 POTEJP0CG39 1038 aa18.5■□□□□ 0.55
SNX13-205ENST00000471744 RBM26Q5T8P6 1007 aaKnown RBP18.5■□□□□ 0.55
SNX13-205ENST00000471744 SPTY2D1Q68D10 685 aaPredicted RBP18.5■□□□□ 0.55
SNX13-205ENST00000471744 SPATA5Q8NB90 893 aa18.5■□□□□ 0.55
SNX13-205ENST00000471744 MTMR14Q8NCE2 650 aa18.5■□□□□ 0.55
SNX13-205ENST00000471744 MRIQ9BWK5 157 aa18.5■□□□□ 0.55
SNX13-205ENST00000471744 SERPINA10Q9UK55 444 aa18.5■□□□□ 0.55
SNX13-205ENST00000471744 F8W031 263 aaPredicted RBP18.49■□□□□ 0.55
SNX13-205ENST00000471744 IGSF3O75054 1194 aa18.49■□□□□ 0.55
SNX13-205ENST00000471744 LDHBP07195 334 aaKnown RBP18.49■□□□□ 0.55
SNX13-205ENST00000471744 HIRAP54198 1017 aaPredicted RBP18.49■□□□□ 0.55
SNX13-205ENST00000471744 IRX6P78412 446 aaPredicted RBP18.49■□□□□ 0.55
SNX13-205ENST00000471744 DLGAP5Q15398 846 aa18.49■□□□□ 0.55
SNX13-205ENST00000471744 TLR7Q9NYK1 1049 aaKnown RBP18.49■□□□□ 0.55
SNX13-205ENST00000471744 HMG20BQ9P0W2 317 aa18.49■□□□□ 0.55
SNX13-205ENST00000471744 EGFRP00533 1210 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms