RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.71□□□□□ -1.02
CKS1B-204ENST00000471245 EPXP11678 715 aa8.7□□□□□ -1.02
CKS1B-204ENST00000471245 ERMP1Q7Z2K6 904 aa8.7□□□□□ -1.02
CKS1B-204ENST00000471245 NCAPG2Q86XI2 1143 aa8.7□□□□□ -1.02
CKS1B-204ENST00000471245 BHMTQ93088 406 aa8.7□□□□□ -1.02
CKS1B-204ENST00000471245 LIN7BQ9HAP6 207 aa8.7□□□□□ -1.02
CKS1B-204ENST00000471245 ABCB6Q9NP58 842 aa8.7□□□□□ -1.02
CKS1B-204ENST00000471245 GRIN2AQ12879 1464 aa8.7□□□□□ -1.02
CKS1B-204ENST00000471245 ARHGEF15O94989 841 aa8.69□□□□□ -1.02
CKS1B-204ENST00000471245 PCBP4P57723 403 aaKnown RBP8.69□□□□□ -1.02
CKS1B-204ENST00000471245 GPLD1P80108 840 aa8.69□□□□□ -1.02
CKS1B-204ENST00000471245 GNL2Q13823 731 aaKnown RBP8.69□□□□□ -1.02
CKS1B-204ENST00000471245 ZNF394Q53GI3 561 aa8.69□□□□□ -1.02
CKS1B-204ENST00000471245 COL13A1Q5TAT6 717 aaPredicted RBP8.69□□□□□ -1.02
CKS1B-204ENST00000471245 CCNJLQ8IV13 435 aa8.69□□□□□ -1.02
CKS1B-204ENST00000471245 UBXN4Q92575 508 aa8.69□□□□□ -1.02
CKS1B-204ENST00000471245 TCF12Q99081 682 aa8.69□□□□□ -1.02
CKS1B-204ENST00000471245 ZKSCAN3Q9BRR0 538 aa8.69□□□□□ -1.02
CKS1B-204ENST00000471245 ACBD3Q9H3P7 528 aa8.69□□□□□ -1.02
CKS1B-204ENST00000471245 ZFYVE1Q9HBF4 777 aa8.69□□□□□ -1.02
CKS1B-204ENST00000471245 SRA1Q9HD15 236 aaKnown RBP8.69□□□□□ -1.02
CKS1B-204ENST00000471245 ELOA3CA0A087WX78 387 aaPredicted RBP8.68□□□□□ -1.02
CKS1B-204ENST00000471245 TMEM238LA0A1B0GVL6 79 aa8.68□□□□□ -1.02
CKS1B-204ENST00000471245 ELOA3DA6NLF2 546 aaPredicted RBP8.68□□□□□ -1.02
CKS1B-204ENST00000471245 NEURL1BA8MQ27 555 aa8.68□□□□□ -1.02
CKS1B-204ENST00000471245 RACK1P63244 317 aaKnown RBP8.68□□□□□ -1.02
CKS1B-204ENST00000471245 MAP3K10Q02779 954 aa8.68□□□□□ -1.02
CKS1B-204ENST00000471245 ELOA3BQ3SY89 546 aa8.68□□□□□ -1.02
CKS1B-204ENST00000471245 RAB44Q7Z6P3 723 aaPredicted RBP8.68□□□□□ -1.02
CKS1B-204ENST00000471245 FCHSD1Q86WN1 690 aa8.68□□□□□ -1.02
CKS1B-204ENST00000471245 CEP120Q8N960 986 aa8.68□□□□□ -1.02
CKS1B-204ENST00000471245 GALNT6Q8NCL4 622 aa8.68□□□□□ -1.02
CKS1B-204ENST00000471245 ELOA3Q8NG57 546 aa8.68□□□□□ -1.02
CKS1B-204ENST00000471245 TRPM4Q8TD43 1214 aa8.68□□□□□ -1.02
CKS1B-204ENST00000471245 EDARADDQ8WWZ3 215 aa8.68□□□□□ -1.02
CKS1B-204ENST00000471245 OSMRQ99650 979 aa8.68□□□□□ -1.02
CKS1B-204ENST00000471245 CAPN10Q9HC96 672 aa8.68□□□□□ -1.02
CKS1B-204ENST00000471245 TTF2Q9UNY4 1162 aaKnown RBP8.68□□□□□ -1.02
CKS1B-204ENST00000471245 ADAMTS12P58397 1594 aa8.68□□□□□ -1.02
CKS1B-204ENST00000471245 ALAS2P22557 587 aa8.67□□□□□ -1.02
CKS1B-204ENST00000471245 FCGRTP55899 365 aa8.67□□□□□ -1.02
CKS1B-204ENST00000471245 WHAMMQ8TF30 809 aa8.67□□□□□ -1.02
CKS1B-204ENST00000471245 ABCA10Q8WWZ4 1543 aa8.67□□□□□ -1.02
CKS1B-204ENST00000471245 BHLHE41Q9C0J9 482 aaPredicted RBP8.67□□□□□ -1.02
CKS1B-204ENST00000471245 PCDHGB7Q9Y5F8 929 aa8.67□□□□□ -1.02
CKS1B-204ENST00000471245 KDM6BO15054 1643 aa8.66□□□□□ -1.02
CKS1B-204ENST00000471245 NUP160Q12769 1436 aa8.66□□□□□ -1.02
CKS1B-204ENST00000471245 LOC105371045A0A1W2PR82 267 aa8.66□□□□□ -1.02
CKS1B-204ENST00000471245 DTHD1Q6ZMT9 781 aa8.66□□□□□ -1.02
CKS1B-204ENST00000471245 C1orf229Q6ZS94 237 aaPredicted RBP8.66□□□□□ -1.02
CKS1B-204ENST00000471245 SPACA7Q96KW9 195 aa8.66□□□□□ -1.02
CKS1B-204ENST00000471245 NSUN5Q96P11 429 aaKnown RBP8.66□□□□□ -1.02
CKS1B-204ENST00000471245 DZANK1Q9NVP4 752 aa8.66□□□□□ -1.02
CKS1B-204ENST00000471245 TSPOAP1O95153 1857 aa8.66□□□□□ -1.02
CKS1B-204ENST00000471245 DIP2BQ9P265 1576 aa8.65□□□□□ -1.02
CKS1B-204ENST00000471245 RLBP1P12271 317 aa8.65□□□□□ -1.02
CKS1B-204ENST00000471245 ITPKAP23677 461 aa8.65□□□□□ -1.02
CKS1B-204ENST00000471245 PWP1Q13610 501 aa8.65□□□□□ -1.02
CKS1B-204ENST00000471245 KANK3Q6NY19 840 aa8.65□□□□□ -1.02
CKS1B-204ENST00000471245 SVOPQ8N4V2 548 aa8.65□□□□□ -1.02
CKS1B-204ENST00000471245 TMEM102Q8N9M5 508 aaPredicted RBP8.65□□□□□ -1.02
CKS1B-204ENST00000471245 BTBD6Q96KE9 485 aa8.65□□□□□ -1.02
CKS1B-204ENST00000471245 GMLQ99445 158 aa8.65□□□□□ -1.02
CKS1B-204ENST00000471245 RSRP1Q9BUV0 290 aa8.65□□□□□ -1.02
CKS1B-204ENST00000471245 INPP5FQ9Y2H2 1132 aa8.65□□□□□ -1.02
CKS1B-204ENST00000471245 ABCC10Q5T3U5 1492 aa8.64□□□□□ -1.03
CKS1B-204ENST00000471245 NFKBIEO00221 500 aa8.64□□□□□ -1.03
CKS1B-204ENST00000471245 ACPPP15309 386 aa8.64□□□□□ -1.03
CKS1B-204ENST00000471245 CCDC85BQ15834 202 aaPredicted RBP8.64□□□□□ -1.03
CKS1B-204ENST00000471245 SV2BQ7L1I2 683 aa8.64□□□□□ -1.03
CKS1B-204ENST00000471245 TANGO6Q9C0B7 1094 aa8.64□□□□□ -1.03
CKS1B-204ENST00000471245 LOC102724428A0A0B4J2F2 783 aa8.63□□□□□ -1.03
CKS1B-204ENST00000471245 GJA8P48165 433 aa8.63□□□□□ -1.03
CKS1B-204ENST00000471245 TNNI2P48788 182 aa8.63□□□□□ -1.03
CKS1B-204ENST00000471245 SIK1P57059 783 aa8.63□□□□□ -1.03
CKS1B-204ENST00000471245 ARMC5Q96C12 935 aa8.63□□□□□ -1.03
CKS1B-204ENST00000471245 CEP44Q9C0F1 390 aa8.63□□□□□ -1.03
CKS1B-204ENST00000471245 MAPKBP1O60336 1514 aa8.63□□□□□ -1.03
CKS1B-204ENST00000471245 ZBTB42B2RXF5 422 aa8.62□□□□□ -1.03
CKS1B-204ENST00000471245 ADH7P40394 386 aa8.62□□□□□ -1.03
CKS1B-204ENST00000471245 GRIA4P48058 902 aa8.62□□□□□ -1.03
CKS1B-204ENST00000471245 RPS26P11Q5JNZ5 115 aaPredicted RBP8.62□□□□□ -1.03
CKS1B-204ENST00000471245 NXPE3Q969Y0 559 aa8.62□□□□□ -1.03
CKS1B-204ENST00000471245 PBX4Q9BYU1 374 aa8.62□□□□□ -1.03
CKS1B-204ENST00000471245 RBSNQ9H1K0 784 aa8.62□□□□□ -1.03
CKS1B-204ENST00000471245 COPRSQ9NQ92 184 aa8.62□□□□□ -1.03
CKS1B-204ENST00000471245 KBTBD4Q9NVX7 518 aa8.62□□□□□ -1.03
CKS1B-204ENST00000471245 DNAJB12Q9NXW2 375 aaKnown RBP8.62□□□□□ -1.03
CKS1B-204ENST00000471245 AKAP2Q9Y2D5 859 aa8.62□□□□□ -1.03
CKS1B-204ENST00000471245 SHISA8B8ZZ34 492 aa8.61□□□□□ -1.03
CKS1B-204ENST00000471245 PDE2AO00408 941 aaPredicted RBP8.61□□□□□ -1.03
CKS1B-204ENST00000471245 GHRHP01286 108 aa8.61□□□□□ -1.03
CKS1B-204ENST00000471245 NEDD1Q8NHV4 660 aa8.61□□□□□ -1.03
CKS1B-204ENST00000471245 TTC9Q92623 222 aa8.61□□□□□ -1.03
CKS1B-204ENST00000471245 UBE2OQ9C0C9 1292 aaKnown RBP8.61□□□□□ -1.03
CKS1B-204ENST00000471245 PRDM6Q9NQX0 595 aa8.61□□□□□ -1.03
CKS1B-204ENST00000471245 FRRS1LQ9P0K9 344 aa8.61□□□□□ -1.03
CKS1B-204ENST00000471245 PRKAG2Q9UGJ0 569 aa8.61□□□□□ -1.03
CKS1B-204ENST00000471245 ADCY10Q96PN6 1610 aa8.61□□□□□ -1.03
CKS1B-204ENST00000471245 A0A096LPE4 126 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms