RNA–Protein interactions for RNA: ENST00000471117.5

FDPS-209, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 3

Gene FDPS, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-209ENST00000471117 CDC37L1Q7L3B6 337 aa10.21□□□□□ -0.77
FDPS-209ENST00000471117 LRCH3Q96II8 777 aa10.21□□□□□ -0.77
FDPS-209ENST00000471117 GBA2Q9HCG7 927 aaPredicted RBP10.21□□□□□ -0.77
FDPS-209ENST00000471117 COPRSQ9NQ92 184 aa10.21□□□□□ -0.77
FDPS-209ENST00000471117 GPRC5DQ9NZD1 345 aa10.21□□□□□ -0.77
FDPS-209ENST00000471117 SPEF2Q9C093 1822 aa10.21□□□□□ -0.78
FDPS-209ENST00000471117 ANKRD18BA2A2Z9 1011 aa10.2□□□□□ -0.78
FDPS-209ENST00000471117 GPR25O00155 361 aa10.2□□□□□ -0.78
FDPS-209ENST00000471117 CDC45O75419 566 aa10.2□□□□□ -0.78
FDPS-209ENST00000471117 SDSP20132 328 aa10.2□□□□□ -0.78
FDPS-209ENST00000471117 HIRAP54198 1017 aaPredicted RBP10.2□□□□□ -0.78
FDPS-209ENST00000471117 ST5P78524 1137 aa10.2□□□□□ -0.78
FDPS-209ENST00000471117 PTPN12Q05209 780 aaKnown RBP10.2□□□□□ -0.78
FDPS-209ENST00000471117 AOX1Q06278 1338 aa10.2□□□□□ -0.78
FDPS-209ENST00000471117 TSHZ3Q63HK5 1081 aa10.2□□□□□ -0.78
FDPS-209ENST00000471117 TBC1D9Q6ZT07 1266 aa10.2□□□□□ -0.78
FDPS-209ENST00000471117 CLASRPQ8N2M8 674 aaKnown RBP10.2□□□□□ -0.78
FDPS-209ENST00000471117 C2orf69Q8N8R5 385 aa10.2□□□□□ -0.78
FDPS-209ENST00000471117 KLHDC4Q8TBB5 520 aa10.2□□□□□ -0.78
FDPS-209ENST00000471117 ABCC12Q96J65 1359 aa10.2□□□□□ -0.78
FDPS-209ENST00000471117 NLRP3Q96P20 1036 aa10.2□□□□□ -0.78
FDPS-209ENST00000471117 CCDC85AQ96PX6 553 aaPredicted RBP10.2□□□□□ -0.78
FDPS-209ENST00000471117 SIL1Q9H173 461 aa10.2□□□□□ -0.78
FDPS-209ENST00000471117 UPF2Q9HAU5 1272 aaKnown RBP10.2□□□□□ -0.78
FDPS-209ENST00000471117 RIC1Q4ADV7 1423 aa10.19□□□□□ -0.78
FDPS-209ENST00000471117 RTL9Q8NET4 1388 aa10.19□□□□□ -0.78
FDPS-209ENST00000471117 SASH1O94885 1247 aa10.19□□□□□ -0.78
FDPS-209ENST00000471117 ITGA6P23229 1130 aa10.19□□□□□ -0.78
FDPS-209ENST00000471117 MFAP1P55081 439 aaKnown RBP10.19□□□□□ -0.78
FDPS-209ENST00000471117 LARGE2Q8N3Y3 721 aa10.19□□□□□ -0.78
FDPS-209ENST00000471117 IPO9Q96P70 1041 aaKnown RBP10.19□□□□□ -0.78
FDPS-209ENST00000471117 GREM2Q9H772 168 aa10.19□□□□□ -0.78
FDPS-209ENST00000471117 PGAP2Q9UHJ9 254 aa10.19□□□□□ -0.78
FDPS-209ENST00000471117 RANBP2P49792 3224 aaKnown RBP10.18□□□□□ -0.78
FDPS-209ENST00000471117 IFIT2P09913 472 aaKnown RBP10.18□□□□□ -0.78
FDPS-209ENST00000471117 SF3B3Q15393 1217 aaKnown RBP10.18□□□□□ -0.78
FDPS-209ENST00000471117 TRPM4Q8TD43 1214 aa10.18□□□□□ -0.78
FDPS-209ENST00000471117 TBC1D32Q96NH3 1257 aa10.18□□□□□ -0.78
FDPS-209ENST00000471117 FBXO3Q9UK99 471 aa10.18□□□□□ -0.78
FDPS-209ENST00000471117 TAF1P21675 1872 aa10.18□□□□□ -0.78
FDPS-209ENST00000471117 EYA2O00167 538 aa10.17□□□□□ -0.78
FDPS-209ENST00000471117 FKTNO75072 461 aa10.17□□□□□ -0.78
FDPS-209ENST00000471117 CIAO1O76071 339 aa10.17□□□□□ -0.78
FDPS-209ENST00000471117 NPR1P16066 1061 aa10.17□□□□□ -0.78
FDPS-209ENST00000471117 IL15P40933 162 aaPredicted RBP10.17□□□□□ -0.78
FDPS-209ENST00000471117 GMPSP49915 693 aaPredicted RBP10.17□□□□□ -0.78
FDPS-209ENST00000471117 AACSQ86V21 672 aa10.17□□□□□ -0.78
FDPS-209ENST00000471117 EAF2Q96CJ1 260 aaPredicted RBP10.17□□□□□ -0.78
FDPS-209ENST00000471117 DDRGK1Q96HY6 314 aa10.17□□□□□ -0.78
FDPS-209ENST00000471117 ZNF594Q96JF6 807 aaPredicted RBP10.17□□□□□ -0.78
FDPS-209ENST00000471117 CDC5LQ99459 802 aaKnown RBP10.17□□□□□ -0.78
FDPS-209ENST00000471117 R3HDMLQ9H3Y0 253 aa10.17□□□□□ -0.78
FDPS-209ENST00000471117 TRIM17Q9Y577 477 aa10.17□□□□□ -0.78
FDPS-209ENST00000471117 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.17□□□□□ -0.78
FDPS-209ENST00000471117 TTC41PQ6P2S7 1318 aa10.16□□□□□ -0.78
FDPS-209ENST00000471117 SHTN1A0MZ66 631 aa10.16□□□□□ -0.78
FDPS-209ENST00000471117 TRIM6-TRIM34B2RNG4 842 aa10.16□□□□□ -0.78
FDPS-209ENST00000471117 EIF5BO60841 1220 aaKnown RBP10.16□□□□□ -0.78
FDPS-209ENST00000471117 IGHMBP2P38935 993 aaKnown RBP10.16□□□□□ -0.78
FDPS-209ENST00000471117 CASC1Q6TDU7 716 aa10.16□□□□□ -0.78
FDPS-209ENST00000471117 LDHAL6AQ6ZMR3 332 aa10.16□□□□□ -0.78
FDPS-209ENST00000471117 C3orf67Q6ZVT6 689 aa10.16□□□□□ -0.78
FDPS-209ENST00000471117 RASAL3Q86YV0 1011 aa10.16□□□□□ -0.78
FDPS-209ENST00000471117 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.16□□□□□ -0.78
FDPS-209ENST00000471117 PI4K2BQ8TCG2 481 aa10.16□□□□□ -0.78
FDPS-209ENST00000471117 ZC3H15Q8WU90 426 aaKnown RBP10.16□□□□□ -0.78
FDPS-209ENST00000471117 GPATCH3Q96I76 525 aa10.16□□□□□ -0.78
FDPS-209ENST00000471117 MPHOSPH8Q99549 860 aa10.16□□□□□ -0.78
FDPS-209ENST00000471117 C22orf23Q9BZE7 217 aa10.16□□□□□ -0.78
FDPS-209ENST00000471117 CCDC8Q9H0W5 538 aaPredicted RBP10.16□□□□□ -0.78
FDPS-209ENST00000471117 CNNM1Q9NRU3 951 aa10.16□□□□□ -0.78
FDPS-209ENST00000471117 ECHDC1Q9NTX5 307 aa10.16□□□□□ -0.78
FDPS-209ENST00000471117 ERC2O15083 957 aa10.15□□□□□ -0.78
FDPS-209ENST00000471117 GLRX3O76003 335 aaKnown RBP10.15□□□□□ -0.78
FDPS-209ENST00000471117 TFCP2Q12800 502 aa10.15□□□□□ -0.78
FDPS-209ENST00000471117 LRRC24Q50LG9 513 aa10.15□□□□□ -0.78
FDPS-209ENST00000471117 DDX46Q7L014 1031 aaKnown RBP10.15□□□□□ -0.78
FDPS-209ENST00000471117 Q7L0L9 218 aa10.15□□□□□ -0.78
FDPS-209ENST00000471117 ATG9AQ7Z3C6 839 aa10.15□□□□□ -0.78
FDPS-209ENST00000471117 ANKRD18AQ8IVF6 992 aa10.15□□□□□ -0.78
FDPS-209ENST00000471117 NIM1KQ8IY84 436 aa10.15□□□□□ -0.78
FDPS-209ENST00000471117 REM2Q8IYK8 340 aaPredicted RBP10.15□□□□□ -0.78
FDPS-209ENST00000471117 DPF3Q92784 378 aa10.15□□□□□ -0.78
FDPS-209ENST00000471117 RPGRQ92834 1020 aaKnown RBP10.15□□□□□ -0.78
FDPS-209ENST00000471117 RILPL2Q969X0 211 aa10.15□□□□□ -0.78
FDPS-209ENST00000471117 PSMD1Q99460 953 aa10.15□□□□□ -0.78
FDPS-209ENST00000471117 PUS3Q9BZE2 481 aaKnown RBP10.15□□□□□ -0.78
FDPS-209ENST00000471117 SEC31BQ9NQW1 1179 aa10.15□□□□□ -0.78
FDPS-209ENST00000471117 CEP126Q9P2H0 1117 aa10.15□□□□□ -0.78
FDPS-209ENST00000471117 AK9Q5TCS8 1911 aa10.15□□□□□ -0.79
FDPS-209ENST00000471117 KLRG2A4D1S0 409 aaPredicted RBP10.14□□□□□ -0.79
FDPS-209ENST00000471117 ADM5C9JUS6 153 aa10.14□□□□□ -0.79
FDPS-209ENST00000471117 MAP4K4O95819 1239 aaPredicted RBP10.14□□□□□ -0.79
FDPS-209ENST00000471117 TNNI3KQ59H18 835 aa10.14□□□□□ -0.79
FDPS-209ENST00000471117 METTL24Q5JXM2 366 aa10.14□□□□□ -0.79
FDPS-209ENST00000471117 KRT26Q7Z3Y9 468 aa10.14□□□□□ -0.79
FDPS-209ENST00000471117 SLC51AQ86UW1 340 aa10.14□□□□□ -0.79
FDPS-209ENST00000471117 DEFB123Q8N688 67 aa10.14□□□□□ -0.79
FDPS-209ENST00000471117 TMEM106CQ9BVX2 250 aa10.14□□□□□ -0.79
FDPS-209ENST00000471117 RIPOR2Q9Y4F9 1068 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms