RNA–Protein interactions for RNA: ENST00000470443.5

PABPC4-210, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 1,212 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-210ENST00000470443 HELBQ8NG08 1087 aaPredicted RBP8.4□□□□□ -1.06
PABPC4-210ENST00000470443 TSC1Q92574 1164 aa8.4□□□□□ -1.06
PABPC4-210ENST00000470443 PURBQ96QR8 312 aaKnown RBP8.4□□□□□ -1.06
PABPC4-210ENST00000470443 C1QTNF2Q9BXJ5 285 aa8.4□□□□□ -1.06
PABPC4-210ENST00000470443 TBC1D2BQ9UPU7 963 aa8.4□□□□□ -1.06
PABPC4-210ENST00000470443 VIRMAQ69YN4 1812 aaKnown RBP8.39□□□□□ -1.07
PABPC4-210ENST00000470443 ZIC2O95409 532 aaPredicted RBP8.39□□□□□ -1.07
PABPC4-210ENST00000470443 NR3C2P08235 984 aa8.39□□□□□ -1.07
PABPC4-210ENST00000470443 HMOX1P09601 288 aa8.39□□□□□ -1.07
PABPC4-210ENST00000470443 GRM5P41594 1212 aa8.39□□□□□ -1.07
PABPC4-210ENST00000470443 MTHFSDQ2M296 383 aaKnown RBP8.39□□□□□ -1.07
PABPC4-210ENST00000470443 SH3RF1Q7Z6J0 888 aa8.39□□□□□ -1.07
PABPC4-210ENST00000470443 C7orf43Q8WVR3 580 aa8.39□□□□□ -1.07
PABPC4-210ENST00000470443 PRDM10Q9NQV6 1147 aa8.39□□□□□ -1.07
PABPC4-210ENST00000470443 MRC1P22897 1456 aa8.38□□□□□ -1.07
PABPC4-210ENST00000470443 CACNA1SQ13698 1873 aa8.38□□□□□ -1.07
PABPC4-210ENST00000470443 HSPA8P11142 646 aaKnown RBP8.38□□□□□ -1.07
PABPC4-210ENST00000470443 SLC51AQ86UW1 340 aa8.38□□□□□ -1.07
PABPC4-210ENST00000470443 ITPKCQ96DU7 683 aa8.38□□□□□ -1.07
PABPC4-210ENST00000470443 BRIP1Q9BX63 1249 aa8.38□□□□□ -1.07
PABPC4-210ENST00000470443 TAF1DQ9H5J8 278 aaPredicted RBP8.38□□□□□ -1.07
PABPC4-210ENST00000470443 ZFAND3Q9H8U3 227 aa8.38□□□□□ -1.07
PABPC4-210ENST00000470443 MAP4K5Q9Y4K4 846 aa8.38□□□□□ -1.07
PABPC4-210ENST00000470443 ERBB4Q15303 1308 aa8.37□□□□□ -1.07
PABPC4-210ENST00000470443 ZNF541Q9H0D2 1346 aa8.37□□□□□ -1.07
PABPC4-210ENST00000470443 LTBP3Q9NS15 1303 aa8.37□□□□□ -1.07
PABPC4-210ENST00000470443 FAM181BA6NEQ2 426 aa8.37□□□□□ -1.07
PABPC4-210ENST00000470443 KCNQ3O43525 872 aa8.37□□□□□ -1.07
PABPC4-210ENST00000470443 A1BGP04217 495 aa8.37□□□□□ -1.07
PABPC4-210ENST00000470443 PIP4K2AP48426 406 aaPredicted RBP8.37□□□□□ -1.07
PABPC4-210ENST00000470443 CTCFP49711 727 aaPredicted RBP8.37□□□□□ -1.07
PABPC4-210ENST00000470443 CLK2P49760 499 aaKnown RBP8.37□□□□□ -1.07
PABPC4-210ENST00000470443 RTL5Q5HYW3 569 aaPredicted RBP8.37□□□□□ -1.07
PABPC4-210ENST00000470443 SH3BP5LQ7L8J4 393 aa8.37□□□□□ -1.07
PABPC4-210ENST00000470443 MORC1Q86VD1 984 aa8.37□□□□□ -1.07
PABPC4-210ENST00000470443 TRMT44Q8IYL2 757 aaKnown RBP8.37□□□□□ -1.07
PABPC4-210ENST00000470443 ABHD8Q96I13 439 aa8.37□□□□□ -1.07
PABPC4-210ENST00000470443 ZNF496Q96IT1 587 aaPredicted RBP8.37□□□□□ -1.07
PABPC4-210ENST00000470443 RSPH6AQ9H0K4 717 aa8.37□□□□□ -1.07
PABPC4-210ENST00000470443 SLC24A3Q9HC58 644 aa8.37□□□□□ -1.07
PABPC4-210ENST00000470443 UBR2Q8IWV8 1755 aa8.37□□□□□ -1.07
PABPC4-210ENST00000470443 ADAMTSL1Q8N6G6 1762 aa8.37□□□□□ -1.07
PABPC4-210ENST00000470443 PRAMEF22A3QJZ6 481 aa8.36□□□□□ -1.07
PABPC4-210ENST00000470443 TMEM88BA6NKF7 163 aa8.36□□□□□ -1.07
PABPC4-210ENST00000470443 CAMTA2O94983 1202 aa8.36□□□□□ -1.07
PABPC4-210ENST00000470443 SRGNP10124 158 aa8.36□□□□□ -1.07
PABPC4-210ENST00000470443 PDE6BP35913 854 aa8.36□□□□□ -1.07
PABPC4-210ENST00000470443 EAPPQ56P03 285 aaPredicted RBP8.36□□□□□ -1.07
PABPC4-210ENST00000470443 MAP1SQ66K74 1059 aaPredicted RBP8.36□□□□□ -1.07
PABPC4-210ENST00000470443 PRPF40BQ6NWY9 871 aaKnown RBP8.36□□□□□ -1.07
PABPC4-210ENST00000470443 IL17REQ8NFR9 667 aa8.36□□□□□ -1.07
PABPC4-210ENST00000470443 GPKOWQ92917 476 aaPredicted RBP eCLIP8.36□□□□□ -1.072e-6■■■□□ 16.7
PABPC4-210ENST00000470443 TAOK3Q9H2K8 898 aa8.36□□□□□ -1.07
PABPC4-210ENST00000470443 SCN7AQ01118 1682 aa8.35□□□□□ -1.07
PABPC4-210ENST00000470443 VSIG8P0DPA2 414 aa8.35□□□□□ -1.07
PABPC4-210ENST00000470443 LORP23490 312 aaPredicted RBP8.35□□□□□ -1.07
PABPC4-210ENST00000470443 LDHDQ86WU2 507 aa8.35□□□□□ -1.07
PABPC4-210ENST00000470443 MEIOBQ8N635 442 aa8.35□□□□□ -1.07
PABPC4-210ENST00000470443 ZSCAN1Q8NBB4 408 aa8.35□□□□□ -1.07
PABPC4-210ENST00000470443 ZNF277Q9NRM2 450 aaPredicted RBP8.35□□□□□ -1.07
PABPC4-210ENST00000470443 ZNF330Q9Y3S2 320 aaPredicted RBP8.35□□□□□ -1.07
PABPC4-210ENST00000470443 COL4A5P29400 1685 aa8.34□□□□□ -1.07
PABPC4-210ENST00000470443 RASSF10A6NK89 507 aa8.34□□□□□ -1.07
PABPC4-210ENST00000470443 HSPA5P11021 654 aaKnown RBP8.34□□□□□ -1.07
PABPC4-210ENST00000470443 STYK1Q6J9G0 422 aa8.34□□□□□ -1.07
PABPC4-210ENST00000470443 CNTROBQ8N137 903 aa8.34□□□□□ -1.07
PABPC4-210ENST00000470443 USP16Q9Y5T5 823 aa8.34□□□□□ -1.07
PABPC4-210ENST00000470443 LTBP1Q14766 1721 aa8.34□□□□□ -1.07
PABPC4-210ENST00000470443 HEG1Q9ULI3 1381 aa8.34□□□□□ -1.07
PABPC4-210ENST00000470443 SCN4AP35499 1836 aa8.33□□□□□ -1.08
PABPC4-210ENST00000470443 RNF123Q5XPI4 1314 aa8.33□□□□□ -1.08
PABPC4-210ENST00000470443 WDR33Q9C0J8 1336 aaKnown RBP8.33□□□□□ -1.08
PABPC4-210ENST00000470443 ARFGEF2Q9Y6D5 1785 aa8.33□□□□□ -1.08
PABPC4-210ENST00000470443 SOBPA7XYQ1 873 aa8.33□□□□□ -1.08
PABPC4-210ENST00000470443 UPP2O95045 317 aa8.33□□□□□ -1.08
PABPC4-210ENST00000470443 FSHRP23945 695 aa8.33□□□□□ -1.08
PABPC4-210ENST00000470443 EPHX2P34913 555 aa8.33□□□□□ -1.08
PABPC4-210ENST00000470443 DEFB115Q30KQ5 88 aa8.33□□□□□ -1.08
PABPC4-210ENST00000470443 VASH1Q7L8A9 365 aaPredicted RBP8.33□□□□□ -1.08
PABPC4-210ENST00000470443 LINC00528Q8N1L1 170 aa8.33□□□□□ -1.08
PABPC4-210ENST00000470443 CNKSR1Q969H4 720 aa8.33□□□□□ -1.08
PABPC4-210ENST00000470443 AIDAQ96BJ3 306 aa8.33□□□□□ -1.08
PABPC4-210ENST00000470443 MASTLQ96GX5 879 aa8.33□□□□□ -1.08
PABPC4-210ENST00000470443 TNRC18O15417 2968 aaPredicted RBP8.32□□□□□ -1.08
PABPC4-210ENST00000470443 SNED1Q8TER0 1413 aa8.32□□□□□ -1.08
PABPC4-210ENST00000470443 A0A087WZG4 1122 aa8.32□□□□□ -1.08
PABPC4-210ENST00000470443 MAN1A2O60476 641 aa8.32□□□□□ -1.08
PABPC4-210ENST00000470443 STARD3NLO95772 234 aa8.32□□□□□ -1.08
PABPC4-210ENST00000470443 IL6STP40189 918 aaPredicted RBP8.32□□□□□ -1.08
PABPC4-210ENST00000470443 FKBP4Q02790 459 aaKnown RBP eCLIP8.32□□□□□ -1.08
PABPC4-210ENST00000470443 C6orf118Q5T5N4 469 aa8.32□□□□□ -1.08
PABPC4-210ENST00000470443 CST9Q5W186 159 aa8.32□□□□□ -1.08
PABPC4-210ENST00000470443 CYP4F22Q6NT55 531 aa8.32□□□□□ -1.08
PABPC4-210ENST00000470443 ZNF790Q6PG37 636 aa8.32□□□□□ -1.08
PABPC4-210ENST00000470443 CNBD1Q8NA66 436 aa8.32□□□□□ -1.08
PABPC4-210ENST00000470443 SETDB2Q96T68 719 aa8.32□□□□□ -1.08
PABPC4-210ENST00000470443 HACL1Q9UJ83 578 aa8.32□□□□□ -1.08
PABPC4-210ENST00000470443 SIPA1L3O60292 1781 aaPredicted RBP8.32□□□□□ -1.08
PABPC4-210ENST00000470443 BCORQ6W2J9 1755 aa8.31□□□□□ -1.08
PABPC4-210ENST00000470443 KLRG2A4D1S0 409 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms