RNA–Protein interactions for RNA: ENST00000469804.1

KPNA4-202, Transcript of karyopherin subunit alpha 4, humanhuman

TSL 2

Gene KPNA4, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4-202ENST00000469804 EGFRP00533 1210 aa31.36■■■□□ 2.61
KPNA4-202ENST00000469804 CHAF1AQ13111 956 aaPredicted RBP31.36■■■□□ 2.61
KPNA4-202ENST00000469804 TNNI3KQ59H18 835 aa31.36■■■□□ 2.61
KPNA4-202ENST00000469804 SAMD7Q7Z3H4 446 aa31.36■■■□□ 2.61
KPNA4-202ENST00000469804 RBM46Q8TBY0 533 aaKnown RBP31.36■■■□□ 2.61
KPNA4-202ENST00000469804 FPGT-TNNI3KV9GXZ4 949 aa31.36■■■□□ 2.61
KPNA4-202ENST00000469804 MYO3BQ8WXR4 1341 aa31.35■■■□□ 2.61
KPNA4-202ENST00000469804 H7C1D1 291 aa31.35■■■□□ 2.61
KPNA4-202ENST00000469804 FRAT2O75474 233 aaPredicted RBP31.35■■■□□ 2.61
KPNA4-202ENST00000469804 IRX6P78412 446 aaPredicted RBP31.35■■■□□ 2.61
KPNA4-202ENST00000469804 EXOC6Q8TAG9 804 aa31.35■■■□□ 2.61
KPNA4-202ENST00000469804 TBC1D10BQ4KMP7 808 aaPredicted RBP31.34■■■□□ 2.61
KPNA4-202ENST00000469804 PNMA8AQ86V59 439 aaPredicted RBP31.34■■■□□ 2.61
KPNA4-202ENST00000469804 KIAA0825Q8IV33 1275 aa31.34■■■□□ 2.61
KPNA4-202ENST00000469804 HIRAP54198 1017 aaPredicted RBP31.33■■■□□ 2.61
KPNA4-202ENST00000469804 C1QTNF8P60827 252 aa31.33■■■□□ 2.61
KPNA4-202ENST00000469804 RBM26Q5T8P6 1007 aaKnown RBP31.33■■■□□ 2.61
KPNA4-202ENST00000469804 CCDC102BQ68D86 513 aa31.33■■■□□ 2.61
KPNA4-202ENST00000469804 USP50Q70EL3 339 aaPredicted RBP31.33■■■□□ 2.61
KPNA4-202ENST00000469804 GPR108Q9NPR9 543 aa31.33■■■□□ 2.61
KPNA4-202ENST00000469804 CLEC11AQ9Y240 323 aa31.33■■■□□ 2.61
KPNA4-202ENST00000469804 USP17L8P0C7I0 530 aa31.32■■■□□ 2.6
KPNA4-202ENST00000469804 LDHDQ86WU2 507 aa31.32■■■□□ 2.6
KPNA4-202ENST00000469804 F8W031 263 aaPredicted RBP31.31■■■□□ 2.6
KPNA4-202ENST00000469804 HSP90AB4PQ58FF6 505 aa31.31■■■□□ 2.6
KPNA4-202ENST00000469804 MFSD14BQ5SR56 506 aa31.31■■■□□ 2.6
KPNA4-202ENST00000469804 ERC1Q8IUD2 1116 aa31.31■■■□□ 2.6
KPNA4-202ENST00000469804 RHPN1Q8TCX5 695 aa31.31■■■□□ 2.6
KPNA4-202ENST00000469804 IL1RAPL2Q9NP60 686 aa31.31■■■□□ 2.6
KPNA4-202ENST00000469804 POLR2AP24928 1970 aaKnown RBP31.3■■■□□ 2.6
KPNA4-202ENST00000469804 ZNF280AP59817 542 aaPredicted RBP31.3■■■□□ 2.6
KPNA4-202ENST00000469804 CHADLQ6NUI6 762 aa31.3■■■□□ 2.6
KPNA4-202ENST00000469804 SMC1BQ8NDV3 1235 aa31.3■■■□□ 2.6
KPNA4-202ENST00000469804 DBNDD2Q9BQY9 259 aa31.3■■■□□ 2.6
KPNA4-202ENST00000469804 TLR7Q9NYK1 1049 aaKnown RBP31.3■■■□□ 2.6
KPNA4-202ENST00000469804 FKBP1AP62942 108 aaKnown RBP31.29■■■□□ 2.6
KPNA4-202ENST00000469804 GRIK5Q16478 980 aa31.29■■■□□ 2.6
KPNA4-202ENST00000469804 KIF4BQ2VIQ3 1234 aa31.29■■■□□ 2.6
KPNA4-202ENST00000469804 EAF2Q96CJ1 260 aaPredicted RBP31.29■■■□□ 2.6
KPNA4-202ENST00000469804 CCDC8Q9H0W5 538 aaPredicted RBP31.29■■■□□ 2.6
KPNA4-202ENST00000469804 GNL3LQ9NVN8 582 aaKnown RBP31.29■■■□□ 2.6
KPNA4-202ENST00000469804 GORABQ5T7V8 394 aa31.28■■■□□ 2.6
KPNA4-202ENST00000469804 BCL11AQ9H165 835 aa31.28■■■□□ 2.6
KPNA4-202ENST00000469804 MYOZ2Q9NPC6 264 aa31.28■■■□□ 2.6
KPNA4-202ENST00000469804 MAP1SQ66K74 1059 aaPredicted RBP31.27■■■□□ 2.6
KPNA4-202ENST00000469804 KIF1BPQ96EK5 621 aa31.27■■■□□ 2.6
KPNA4-202ENST00000469804 DBNLQ9UJU6 430 aaKnown RBP31.27■■■□□ 2.6
KPNA4-202ENST00000469804 AKAP11Q9UKA4 1901 aa31.27■■■□□ 2.6
KPNA4-202ENST00000469804 ECM29Q5VYK3 1845 aa31.26■■■□□ 2.6
KPNA4-202ENST00000469804 RASGRF1Q13972 1273 aa31.26■■■□□ 2.59
KPNA4-202ENST00000469804 ASTN2O75129 1339 aaPredicted RBP31.25■■■□□ 2.59
KPNA4-202ENST00000469804 RAB11FIP3O75154 756 aa31.25■■■□□ 2.59
KPNA4-202ENST00000469804 FSTL1Q12841 308 aa31.25■■■□□ 2.59
KPNA4-202ENST00000469804 AACSQ86V21 672 aa31.25■■■□□ 2.59
KPNA4-202ENST00000469804 OGFOD1Q8N543 542 aa31.25■■■□□ 2.59
KPNA4-202ENST00000469804 DENND2AQ9ULE3 1009 aa31.24■■■□□ 2.59
KPNA4-202ENST00000469804 SCARF1Q14162 830 aa31.23■■■□□ 2.59
KPNA4-202ENST00000469804 PI16Q6UXB8 463 aa31.23■■■□□ 2.59
KPNA4-202ENST00000469804 TBC1D22AQ8WUA7 517 aa31.23■■■□□ 2.59
KPNA4-202ENST00000469804 DCTPP1Q9H773 170 aa31.23■■■□□ 2.59
KPNA4-202ENST00000469804 HDAC9Q9UKV0 1011 aa31.23■■■□□ 2.59
KPNA4-202ENST00000469804 PCDHAC2Q9Y5I4 1007 aa31.23■■■□□ 2.59
KPNA4-202ENST00000469804 SEMA3EO15041 775 aa31.22■■■□□ 2.59
KPNA4-202ENST00000469804 ARID4AP29374 1257 aaPredicted RBP31.22■■■□□ 2.59
KPNA4-202ENST00000469804 TTF2Q9UNY4 1162 aaKnown RBP31.22■■■□□ 2.59
KPNA4-202ENST00000469804 MYO5AQ9Y4I1 1855 aaKnown RBP31.22■■■□□ 2.59
KPNA4-202ENST00000469804 SMARCA5O60264 1052 aaPredicted RBP31.21■■■□□ 2.59
KPNA4-202ENST00000469804 TTC39AQ5SRH9 613 aa31.21■■■□□ 2.59
KPNA4-202ENST00000469804 WDR66Q8TBY9 1149 aa31.21■■■□□ 2.59
KPNA4-202ENST00000469804 NBPF9Q3BBW0 867 aa31.2■■■□□ 2.59
KPNA4-202ENST00000469804 CNTROBQ8N137 903 aa31.2■■■□□ 2.59
KPNA4-202ENST00000469804 CLASRPQ8N2M8 674 aaKnown RBP31.2■■■□□ 2.59
KPNA4-202ENST00000469804 HMG20BQ9P0W2 317 aa31.2■■■□□ 2.59
KPNA4-202ENST00000469804 MCAMP43121 646 aa31.19■■■□□ 2.58
KPNA4-202ENST00000469804 LRRCC1Q9C099 1032 aa31.19■■■□□ 2.58
KPNA4-202ENST00000469804 GGA3Q9NZ52 723 aa31.19■■■□□ 2.58
KPNA4-202ENST00000469804 PGAP2Q9UHJ9 254 aa31.19■■■□□ 2.58
KPNA4-202ENST00000469804 WNT10BO00744 389 aa31.18■■■□□ 2.58
KPNA4-202ENST00000469804 AAMPQ13685 434 aa31.18■■■□□ 2.58
KPNA4-202ENST00000469804 CCDC158Q5M9N0 1113 aa31.18■■■□□ 2.58
KPNA4-202ENST00000469804 TRPM7Q96QT4 1865 aa31.17■■■□□ 2.58
KPNA4-202ENST00000469804 ZBTB22O15209 634 aa31.17■■■□□ 2.58
KPNA4-202ENST00000469804 ITGBL1O95965 494 aaPredicted RBP31.17■■■□□ 2.58
KPNA4-202ENST00000469804 UQCRFS1P1P0C7P4 283 aa31.17■■■□□ 2.58
KPNA4-202ENST00000469804 PRDX5P30044 214 aa31.17■■■□□ 2.58
KPNA4-202ENST00000469804 FMR1Q06787 632 aaKnown RBP eCLIP31.17■■■□□ 2.58
KPNA4-202ENST00000469804 CFAP100Q494V2 611 aa31.17■■■□□ 2.58
KPNA4-202ENST00000469804 SPATA5Q8NB90 893 aa31.17■■■□□ 2.58
KPNA4-202ENST00000469804 ZC3H15Q8WU90 426 aaKnown RBP31.17■■■□□ 2.58
KPNA4-202ENST00000469804 GLIS2Q9BZE0 524 aaPredicted RBP31.17■■■□□ 2.58
KPNA4-202ENST00000469804 MYH2Q9UKX2 1941 aa31.16■■■□□ 2.58
KPNA4-202ENST00000469804 ANGEL2Q5VTE6 544 aaKnown RBP31.16■■■□□ 2.58
KPNA4-202ENST00000469804 ZBED3Q96IU2 234 aaPredicted RBP31.16■■■□□ 2.58
KPNA4-202ENST00000469804 SNRKQ9NRH2 765 aa31.16■■■□□ 2.58
KPNA4-202ENST00000469804 AOX1Q06278 1338 aa31.16■■■□□ 2.58
KPNA4-202ENST00000469804 PDS5AQ29RF7 1337 aaKnown RBP31.16■■■□□ 2.58
KPNA4-202ENST00000469804 SALL1Q9NSC2 1324 aa31.16■■■□□ 2.58
KPNA4-202ENST00000469804 RBM5P52756 815 aaKnown RBP eCLIP31.15■■■□□ 2.58
KPNA4-202ENST00000469804 DLGAP5Q15398 846 aa31.15■■■□□ 2.58
KPNA4-202ENST00000469804 SCAF8Q9UPN6 1271 aaKnown RBP31.15■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms