RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 TFCP2Q12800 502 aa18.29■□□□□ 0.52
TMEM39A-205ENST00000468676 OS9Q13438 667 aaPredicted RBP18.29■□□□□ 0.52
TMEM39A-205ENST00000468676 CNTROBQ8N137 903 aa18.29■□□□□ 0.52
TMEM39A-205ENST00000468676 GNL3LQ9NVN8 582 aaKnown RBP18.29■□□□□ 0.52
TMEM39A-205ENST00000468676 SHTN1A0MZ66 631 aa18.28■□□□□ 0.52
TMEM39A-205ENST00000468676 HIRAP54198 1017 aaPredicted RBP18.28■□□□□ 0.52
TMEM39A-205ENST00000468676 KIF4BQ2VIQ3 1234 aa18.28■□□□□ 0.52
TMEM39A-205ENST00000468676 TBC1D10BQ4KMP7 808 aaPredicted RBP18.28■□□□□ 0.52
TMEM39A-205ENST00000468676 HSP90AB4PQ58FF6 505 aa18.28■□□□□ 0.52
TMEM39A-205ENST00000468676 SAMD7Q7Z3H4 446 aa18.28■□□□□ 0.52
TMEM39A-205ENST00000468676 TRPM4Q8TD43 1214 aa18.28■□□□□ 0.52
TMEM39A-205ENST00000468676 TBC1D22AQ8WUA7 517 aa18.28■□□□□ 0.52
TMEM39A-205ENST00000468676 MYOZ2Q9NPC6 264 aa18.28■□□□□ 0.52
TMEM39A-205ENST00000468676 ZBTB22O15209 634 aa18.27■□□□□ 0.52
TMEM39A-205ENST00000468676 ITGBL1O95965 494 aaPredicted RBP18.27■□□□□ 0.52
TMEM39A-205ENST00000468676 RBM26Q5T8P6 1007 aaKnown RBP18.27■□□□□ 0.52
TMEM39A-205ENST00000468676 MAP1SQ66K74 1059 aaPredicted RBP18.27■□□□□ 0.52
TMEM39A-205ENST00000468676 MXD3Q9BW11 206 aa18.27■□□□□ 0.52
TMEM39A-205ENST00000468676 GPR108Q9NPR9 543 aa18.27■□□□□ 0.52
TMEM39A-205ENST00000468676 A0A1B0GUL7 405 aa18.26■□□□□ 0.51
TMEM39A-205ENST00000468676 SEMA3EO15041 775 aa18.26■□□□□ 0.51
TMEM39A-205ENST00000468676 MFSD14BQ5SR56 506 aa18.26■□□□□ 0.51
TMEM39A-205ENST00000468676 ERC1Q8IUD2 1116 aa18.26■□□□□ 0.51
TMEM39A-205ENST00000468676 TIMM10P62072 90 aa18.25■□□□□ 0.51
TMEM39A-205ENST00000468676 KIAA0825Q8IV33 1275 aa18.25■□□□□ 0.51
TMEM39A-205ENST00000468676 CERS5Q8N5B7 392 aa18.25■□□□□ 0.51
TMEM39A-205ENST00000468676 PASKQ96RG2 1323 aa18.24■□□□□ 0.51
TMEM39A-205ENST00000468676 ARAP2Q8WZ64 1704 aa18.24■□□□□ 0.51
TMEM39A-205ENST00000468676 EGFRP00533 1210 aa18.24■□□□□ 0.51
TMEM39A-205ENST00000468676 CDC37L1Q7L3B6 337 aa18.24■□□□□ 0.51
TMEM39A-205ENST00000468676 WDR66Q8TBY9 1149 aa18.24■□□□□ 0.51
TMEM39A-205ENST00000468676 DCPSQ96C86 337 aaKnown RBP18.24■□□□□ 0.51
TMEM39A-205ENST00000468676 XAGE2Q96GT9 111 aa18.24■□□□□ 0.51
TMEM39A-205ENST00000468676 NEUROD6Q96NK8 337 aa18.24■□□□□ 0.51
TMEM39A-205ENST00000468676 IQSEC3Q9UPP2 1182 aaPredicted RBP18.24■□□□□ 0.51
TMEM39A-205ENST00000468676 SUGT1Q9Y2Z0 365 aa18.24■□□□□ 0.51
TMEM39A-205ENST00000468676 MYH13Q9UKX3 1938 aa18.23■□□□□ 0.51
TMEM39A-205ENST00000468676 POLR2AP24928 1970 aaKnown RBP18.23■□□□□ 0.51
TMEM39A-205ENST00000468676 CHAF1AQ13111 956 aaPredicted RBP18.23■□□□□ 0.51
TMEM39A-205ENST00000468676 SCARF1Q14162 830 aa18.23■□□□□ 0.51
TMEM39A-205ENST00000468676 GORABQ5T7V8 394 aa18.23■□□□□ 0.51
TMEM39A-205ENST00000468676 CCDC102BQ68D86 513 aa18.23■□□□□ 0.51
TMEM39A-205ENST00000468676 MTMR14Q8NCE2 650 aa18.23■□□□□ 0.51
TMEM39A-205ENST00000468676 DENND2AQ9ULE3 1009 aa18.23■□□□□ 0.51
TMEM39A-205ENST00000468676 JAG2Q9Y219 1238 aa18.23■□□□□ 0.51
TMEM39A-205ENST00000468676 ADORA1P30542 326 aa18.22■□□□□ 0.51
TMEM39A-205ENST00000468676 PHKA1P46020 1223 aa18.22■□□□□ 0.51
TMEM39A-205ENST00000468676 SIRT2Q8IXJ6 389 aa18.22■□□□□ 0.51
TMEM39A-205ENST00000468676 PITPNM2Q9BZ72 1349 aa18.22■□□□□ 0.51
TMEM39A-205ENST00000468676 DLGAP5Q15398 846 aa18.21■□□□□ 0.51
TMEM39A-205ENST00000468676 TNNI3KQ59H18 835 aa18.21■□□□□ 0.51
TMEM39A-205ENST00000468676 SERPINA10Q9UK55 444 aa18.21■□□□□ 0.51
TMEM39A-205ENST00000468676 FPGT-TNNI3KV9GXZ4 949 aa18.21■□□□□ 0.51
TMEM39A-205ENST00000468676 MAST3O60307 1309 aa18.21■□□□□ 0.51
TMEM39A-205ENST00000468676 PDS5AQ29RF7 1337 aaKnown RBP18.21■□□□□ 0.51
TMEM39A-205ENST00000468676 CEP350Q5VT06 3117 aa18.21■□□□□ 0.5
TMEM39A-205ENST00000468676 F8W031 263 aaPredicted RBP18.2■□□□□ 0.5
TMEM39A-205ENST00000468676 WNT10BO00744 389 aa18.2■□□□□ 0.5
TMEM39A-205ENST00000468676 RAB11FIP3O75154 756 aa18.2■□□□□ 0.5
TMEM39A-205ENST00000468676 HDLBPQ00341 1268 aaKnown RBP18.2■□□□□ 0.5
TMEM39A-205ENST00000468676 AAMPQ13685 434 aa18.2■□□□□ 0.5
TMEM39A-205ENST00000468676 KRT26Q7Z3Y9 468 aa18.2■□□□□ 0.5
TMEM39A-205ENST00000468676 SULF1Q8IWU6 871 aa18.2■□□□□ 0.5
TMEM39A-205ENST00000468676 MRIQ9BWK5 157 aa18.2■□□□□ 0.5
TMEM39A-205ENST00000468676 CREBZFQ9NS37 354 aa18.2■□□□□ 0.5
TMEM39A-205ENST00000468676 GGA3Q9NZ52 723 aa18.2■□□□□ 0.5
TMEM39A-205ENST00000468676 TTF2Q9UNY4 1162 aaKnown RBP18.2■□□□□ 0.5
TMEM39A-205ENST00000468676 EXOC6BQ9Y2D4 811 aa18.2■□□□□ 0.5
TMEM39A-205ENST00000468676 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.2■□□□□ 0.5
TMEM39A-205ENST00000468676 TMEM88BA6NKF7 163 aa18.19■□□□□ 0.5
TMEM39A-205ENST00000468676 MYO1BO43795 1136 aa18.19■□□□□ 0.5
TMEM39A-205ENST00000468676 UQCRFS1P1P0C7P4 283 aa18.19■□□□□ 0.5
TMEM39A-205ENST00000468676 ZGPATQ8N5A5 531 aaKnown RBP18.19■□□□□ 0.5
TMEM39A-205ENST00000468676 ZBED3Q96IU2 234 aaPredicted RBP18.19■□□□□ 0.5
TMEM39A-205ENST00000468676 TRPM7Q96QT4 1865 aa18.19■□□□□ 0.5
TMEM39A-205ENST00000468676 GLIS2Q9BZE0 524 aaPredicted RBP18.19■□□□□ 0.5
TMEM39A-205ENST00000468676 SALL1Q9NSC2 1324 aa18.19■□□□□ 0.5
TMEM39A-205ENST00000468676 NBPF9Q3BBW0 867 aa18.18■□□□□ 0.5
TMEM39A-205ENST00000468676 CFAP100Q494V2 611 aa18.18■□□□□ 0.5
TMEM39A-205ENST00000468676 CCDC158Q5M9N0 1113 aa18.18■□□□□ 0.5
TMEM39A-205ENST00000468676 ANGEL2Q5VTE6 544 aaKnown RBP18.18■□□□□ 0.5
TMEM39A-205ENST00000468676 USP48Q86UV5 1035 aa18.18■□□□□ 0.5
TMEM39A-205ENST00000468676 KIF1BPQ96EK5 621 aa18.18■□□□□ 0.5
TMEM39A-205ENST00000468676 SPDYE2BA6NHP3 402 aa18.17■□□□□ 0.5
TMEM39A-205ENST00000468676 TRAF5O00463 557 aa18.17■□□□□ 0.5
TMEM39A-205ENST00000468676 SPDYE6P0CI01 402 aa18.17■□□□□ 0.5
TMEM39A-205ENST00000468676 ARID4AP29374 1257 aaPredicted RBP18.17■□□□□ 0.5
TMEM39A-205ENST00000468676 RBM5P52756 815 aaKnown RBP eCLIP18.17■□□□□ 0.5
TMEM39A-205ENST00000468676 RASGRF1Q13972 1273 aa18.17■□□□□ 0.5
TMEM39A-205ENST00000468676 APOBEC3FQ8IUX4 373 aaKnown RBP18.17■□□□□ 0.5
TMEM39A-205ENST00000468676 RHPN1Q8TCX5 695 aa18.17■□□□□ 0.5
TMEM39A-205ENST00000468676 LDHBP07195 334 aaKnown RBP18.16■□□□□ 0.5
TMEM39A-205ENST00000468676 SPTY2D1Q68D10 685 aaPredicted RBP18.16■□□□□ 0.5
TMEM39A-205ENST00000468676 CLASRPQ8N2M8 674 aaKnown RBP18.16■□□□□ 0.5
TMEM39A-205ENST00000468676 TEKT1Q969V4 418 aa18.16■□□□□ 0.5
TMEM39A-205ENST00000468676 ZNF512BQ96KM6 892 aaPredicted RBP18.16■□□□□ 0.5
TMEM39A-205ENST00000468676 CRBNQ96SW2 442 aa18.16■□□□□ 0.5
TMEM39A-205ENST00000468676 ASTN2O75129 1339 aaPredicted RBP18.16■□□□□ 0.5
TMEM39A-205ENST00000468676 COL1A1P02452 1464 aaPredicted RBP18.15■□□□□ 0.5
TMEM39A-205ENST00000468676 ECM29Q5VYK3 1845 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms