RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 C4BP0C0L5 1744 aa16.11■□□□□ 0.17
UBE4B-206ENST00000466379 ZNF532Q9HCE3 1301 aa16.11■□□□□ 0.17
UBE4B-206ENST00000466379 EP400Q96L91 3159 aa16.11■□□□□ 0.17
UBE4B-206ENST00000466379 PLCB2Q00722 1185 aa16.11■□□□□ 0.17
UBE4B-206ENST00000466379 SF3B3Q15393 1217 aaKnown RBP16.11■□□□□ 0.17
UBE4B-206ENST00000466379 CHST3Q7LGC8 479 aa16.11■□□□□ 0.17
UBE4B-206ENST00000466379 CELF1Q92879 486 aaKnown RBP16.11■□□□□ 0.17
UBE4B-206ENST00000466379 LRRC4BQ9NT99 713 aa16.11■□□□□ 0.17
UBE4B-206ENST00000466379 PDE6AP16499 860 aa16.1■□□□□ 0.17
UBE4B-206ENST00000466379 KLHL40Q2TBA0 621 aa16.1■□□□□ 0.17
UBE4B-206ENST00000466379 FAM196AQ6ZSG2 479 aa16.1■□□□□ 0.17
UBE4B-206ENST00000466379 BRF1Q92994 677 aa16.1■□□□□ 0.17
UBE4B-206ENST00000466379 IQSEC3Q9UPP2 1182 aaPredicted RBP16.1■□□□□ 0.17
UBE4B-206ENST00000466379 C4AP0C0L4 1744 aa16.1■□□□□ 0.17
UBE4B-206ENST00000466379 COL24A1Q17RW2 1714 aa16.1■□□□□ 0.17
UBE4B-206ENST00000466379 FGAP02671 866 aa16.1■□□□□ 0.17
UBE4B-206ENST00000466379 ZSCAN22P10073 491 aaPredicted RBP16.1■□□□□ 0.17
UBE4B-206ENST00000466379 ZSCAN25Q6NSZ9 544 aa16.1■□□□□ 0.17
UBE4B-206ENST00000466379 GDPD2Q9HCC8 539 aa16.1■□□□□ 0.17
UBE4B-206ENST00000466379 A0A1B0GUL6 1792 aa16.09■□□□□ 0.17
UBE4B-206ENST00000466379 FGD1P98174 961 aa16.09■□□□□ 0.17
UBE4B-206ENST00000466379 DHX32Q7L7V1 743 aaKnown RBP16.09■□□□□ 0.17
UBE4B-206ENST00000466379 GPT2Q8TD30 523 aa16.09■□□□□ 0.17
UBE4B-206ENST00000466379 GOLGA6L3A6NEY3 463 aa16.08■□□□□ 0.17
UBE4B-206ENST00000466379 SLC10A5Q5PT55 438 aa16.08■□□□□ 0.17
UBE4B-206ENST00000466379 NYXQ9GZU5 481 aa16.08■□□□□ 0.17
UBE4B-206ENST00000466379 TCRBV5S4A2TA0A5A2 114 aa16.08■□□□□ 0.16
UBE4B-206ENST00000466379 RFC4P35249 363 aa16.08■□□□□ 0.16
UBE4B-206ENST00000466379 MAGEB6Q8N7X4 407 aa16.08■□□□□ 0.16
UBE4B-206ENST00000466379 BCL11BQ9C0K0 894 aaPredicted RBP16.08■□□□□ 0.16
UBE4B-206ENST00000466379 NSFL1CQ9UNZ2 370 aaKnown RBP16.08■□□□□ 0.16
UBE4B-206ENST00000466379 FSD2A1L4K1 749 aa16.07■□□□□ 0.16
UBE4B-206ENST00000466379 VPS37CA5D8V6 355 aaPredicted RBP16.07■□□□□ 0.16
UBE4B-206ENST00000466379 F13A1P00488 732 aa16.07■□□□□ 0.16
UBE4B-206ENST00000466379 GYG1P46976 350 aa16.07■□□□□ 0.16
UBE4B-206ENST00000466379 EXOSC10Q01780 885 aaKnown RBP16.07■□□□□ 0.16
UBE4B-206ENST00000466379 APOBRQ0VD83 1088 aa16.07■□□□□ 0.16
UBE4B-206ENST00000466379 UBE3CQ15386 1083 aa16.07■□□□□ 0.16
UBE4B-206ENST00000466379 TRAPPC3LQ5T215 181 aa16.07■□□□□ 0.16
UBE4B-206ENST00000466379 CAVIN1Q6NZI2 390 aaKnown RBP16.07■□□□□ 0.16
UBE4B-206ENST00000466379 RBM27Q9P2N5 1060 aaKnown RBP16.07■□□□□ 0.16
UBE4B-206ENST00000466379 MINPP1Q9UNW1 487 aa16.07■□□□□ 0.16
UBE4B-206ENST00000466379 MTMR6Q9Y217 621 aa16.07■□□□□ 0.16
UBE4B-206ENST00000466379 RGL2O15211 777 aa16.07■□□□□ 0.16
UBE4B-206ENST00000466379 JAK2O60674 1132 aa16.07■□□□□ 0.16
UBE4B-206ENST00000466379 HMGB1P09429 215 aaKnown RBP16.07■□□□□ 0.16
UBE4B-206ENST00000466379 IMMTQ16891 758 aaKnown RBP16.07■□□□□ 0.16
UBE4B-206ENST00000466379 GTF3C6Q969F1 213 aa16.07■□□□□ 0.16
UBE4B-206ENST00000466379 NLRP3Q96P20 1036 aa16.07■□□□□ 0.16
UBE4B-206ENST00000466379 BSDC1Q9NW68 430 aaPredicted RBP16.07■□□□□ 0.16
UBE4B-206ENST00000466379 CTNNA3Q9UI47 895 aa16.07■□□□□ 0.16
UBE4B-206ENST00000466379 TCHHQ07283 1943 aa16.06■□□□□ 0.16
UBE4B-206ENST00000466379 DOCK2Q92608 1830 aa16.06■□□□□ 0.16
UBE4B-206ENST00000466379 BRWD3Q6RI45 1802 aa16.06■□□□□ 0.16
UBE4B-206ENST00000466379 NPHP1O15259 732 aa16.06■□□□□ 0.16
UBE4B-206ENST00000466379 APPP05067 770 aa16.06■□□□□ 0.16
UBE4B-206ENST00000466379 TPTE2Q6XPS3 522 aa16.06■□□□□ 0.16
UBE4B-206ENST00000466379 GAS2L3Q86XJ1 694 aa16.06■□□□□ 0.16
UBE4B-206ENST00000466379 GPHNQ9NQX3 736 aaPredicted RBP16.06■□□□□ 0.16
UBE4B-206ENST00000466379 BRPF3Q9ULD4 1205 aa16.06■□□□□ 0.16
UBE4B-206ENST00000466379 CNPY2Q9Y2B0 182 aa16.06■□□□□ 0.16
UBE4B-206ENST00000466379 TNRC6CQ9HCJ0 1690 aaKnown RBP16.05■□□□□ 0.16
UBE4B-206ENST00000466379 SCRN1Q12765 414 aa16.05■□□□□ 0.16
UBE4B-206ENST00000466379 MAP3K12Q12852 859 aa16.05■□□□□ 0.16
UBE4B-206ENST00000466379 LARP1BQ659C4 914 aaKnown RBP16.05■□□□□ 0.16
UBE4B-206ENST00000466379 NAP1L2Q9ULW6 460 aaPredicted RBP16.05■□□□□ 0.16
UBE4B-206ENST00000466379 TRIM37O94972 964 aa16.05■□□□□ 0.16
UBE4B-206ENST00000466379 SLC51AQ86UW1 340 aa16.05■□□□□ 0.16
UBE4B-206ENST00000466379 AIDAQ96BJ3 306 aa16.05■□□□□ 0.16
UBE4B-206ENST00000466379 NBPF3Q9H094 633 aa16.05■□□□□ 0.16
UBE4B-206ENST00000466379 DENND2AQ9ULE3 1009 aa16.05■□□□□ 0.16
UBE4B-206ENST00000466379 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.04■□□□□ 0.16
UBE4B-206ENST00000466379 ZNF213O14771 459 aa16.04■□□□□ 0.16
UBE4B-206ENST00000466379 GADD45BO75293 160 aaPredicted RBP16.04■□□□□ 0.16
UBE4B-206ENST00000466379 KLRK1P26718 216 aa16.04■□□□□ 0.16
UBE4B-206ENST00000466379 NFIXQ14938 502 aa16.04■□□□□ 0.16
UBE4B-206ENST00000466379 L1TD1Q5T7N2 865 aaKnown RBP16.04■□□□□ 0.16
UBE4B-206ENST00000466379 CDC37L1Q7L3B6 337 aa16.04■□□□□ 0.16
UBE4B-206ENST00000466379 USP48Q86UV5 1035 aa16.04■□□□□ 0.16
UBE4B-206ENST00000466379 ARMT1Q9H993 441 aa16.04■□□□□ 0.16
UBE4B-206ENST00000466379 COL1A1P02452 1464 aaPredicted RBP16.04■□□□□ 0.16
UBE4B-206ENST00000466379 MBD4O95243 580 aa16.03■□□□□ 0.16
UBE4B-206ENST00000466379 RPS8P62241 208 aaKnown RBP16.03■□□□□ 0.16
UBE4B-206ENST00000466379 NKX2-3Q8TAU0 364 aa16.03■□□□□ 0.16
UBE4B-206ENST00000466379 DDX11Q96FC9 970 aa16.03■□□□□ 0.16
UBE4B-206ENST00000466379 STRBPQ96SI9 672 aaKnown RBP16.03■□□□□ 0.16
UBE4B-206ENST00000466379 XRCC6P12956 609 aaKnown RBP eCLIP16.03■□□□□ 0.16
UBE4B-206ENST00000466379 CCT2P78371 535 aaKnown RBP16.03■□□□□ 0.16
UBE4B-206ENST00000466379 UBE4AQ14139 1066 aa16.03■□□□□ 0.16
UBE4B-206ENST00000466379 KRT27Q7Z3Y8 459 aa16.03■□□□□ 0.16
UBE4B-206ENST00000466379 FERMT3Q86UX7 667 aa16.03■□□□□ 0.16
UBE4B-206ENST00000466379 LRP2BPQ9P2M1 347 aa16.03■□□□□ 0.16
UBE4B-206ENST00000466379 PPFIA3O75145 1194 aa16.02■□□□□ 0.16
UBE4B-206ENST00000466379 TBC1D10CQ8IV04 446 aa16.02■□□□□ 0.16
UBE4B-206ENST00000466379 AGXT2Q9BYV1 514 aa16.02■□□□□ 0.16
UBE4B-206ENST00000466379 NCOA5Q9HCD5 579 aaKnown RBP16.02■□□□□ 0.16
UBE4B-206ENST00000466379 ABCF2Q9UG63 623 aa16.02■□□□□ 0.16
UBE4B-206ENST00000466379 PFKFB2O60825 505 aa16.02■□□□□ 0.15
UBE4B-206ENST00000466379 TM4SF1P30408 202 aa16.02■□□□□ 0.15
UBE4B-206ENST00000466379 DNM1Q05193 864 aaKnown RBP16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms