RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 J3QW42 95 aa3.27□□□□□ -1.89
NUCKS1-202ENST00000464938 SORBS3O60504 671 aa3.27□□□□□ -1.89
NUCKS1-202ENST00000464938 ALBP02768 609 aa3.27□□□□□ -1.89
NUCKS1-202ENST00000464938 ACPPP15309 386 aa3.27□□□□□ -1.89
NUCKS1-202ENST00000464938 ADH7P40394 386 aa3.27□□□□□ -1.89
NUCKS1-202ENST00000464938 PTPN12Q05209 780 aaKnown RBP3.27□□□□□ -1.89
NUCKS1-202ENST00000464938 GRIK5Q16478 980 aa3.27□□□□□ -1.89
NUCKS1-202ENST00000464938 C8orf86Q6ZUL3 223 aa3.27□□□□□ -1.89
NUCKS1-202ENST00000464938 MICALL1Q8N3F8 863 aa3.27□□□□□ -1.89
NUCKS1-202ENST00000464938 C3orf58Q8NDZ4 430 aa3.27□□□□□ -1.89
NUCKS1-202ENST00000464938 FAM161BQ96MY7 647 aa3.27□□□□□ -1.89
NUCKS1-202ENST00000464938 OSMRQ99650 979 aa3.27□□□□□ -1.89
NUCKS1-202ENST00000464938 LPIN3Q9BQK8 851 aa3.27□□□□□ -1.89
NUCKS1-202ENST00000464938 ZKSCAN3Q9BRR0 538 aa3.27□□□□□ -1.89
NUCKS1-202ENST00000464938 PBX4Q9BYU1 374 aa3.27□□□□□ -1.89
NUCKS1-202ENST00000464938 BCO2Q9BYV7 579 aa3.27□□□□□ -1.89
NUCKS1-202ENST00000464938 BACH2Q9BYV9 841 aa3.27□□□□□ -1.89
NUCKS1-202ENST00000464938 C12orf49Q9H741 205 aa3.27□□□□□ -1.89
NUCKS1-202ENST00000464938 ABCB6Q9NP58 842 aa3.27□□□□□ -1.89
NUCKS1-202ENST00000464938 NAGPAQ9UK23 515 aa3.27□□□□□ -1.89
NUCKS1-202ENST00000464938 RNF112Q9ULX5 631 aa3.27□□□□□ -1.89
NUCKS1-202ENST00000464938 SPG7Q9UQ90 795 aa3.27□□□□□ -1.89
NUCKS1-202ENST00000464938 USP31Q70CQ4 1352 aa3.26□□□□□ -1.89
NUCKS1-202ENST00000464938 TMEM238LA0A1B0GVL6 79 aa3.26□□□□□ -1.89
NUCKS1-202ENST00000464938 M0R082 166 aa3.26□□□□□ -1.89
NUCKS1-202ENST00000464938 YBX3P16989 372 aaKnown RBP eCLIP3.26□□□□□ -1.89
NUCKS1-202ENST00000464938 ITPKAP23677 461 aa3.26□□□□□ -1.89
NUCKS1-202ENST00000464938 XPCQ01831 940 aaPredicted RBP3.26□□□□□ -1.89
NUCKS1-202ENST00000464938 PSMD2Q13200 908 aa3.26□□□□□ -1.89
NUCKS1-202ENST00000464938 PERM1Q5SV97 790 aa3.26□□□□□ -1.89
NUCKS1-202ENST00000464938 NXPE4Q6UWF7 544 aa3.26□□□□□ -1.89
NUCKS1-202ENST00000464938 ADAMTSL4Q6UY14 1074 aa3.26□□□□□ -1.89
NUCKS1-202ENST00000464938 TXNRD3Q86VQ6 643 aa3.26□□□□□ -1.89
NUCKS1-202ENST00000464938 NCAPG2Q86XI2 1143 aa3.26□□□□□ -1.89
NUCKS1-202ENST00000464938 ZNF417Q8TAU3 575 aa3.26□□□□□ -1.89
NUCKS1-202ENST00000464938 NSUN5Q96P11 429 aaKnown RBP3.26□□□□□ -1.89
NUCKS1-202ENST00000464938 HHIPQ96QV1 700 aa3.26□□□□□ -1.89
NUCKS1-202ENST00000464938 ZNF587Q96SQ5 575 aaPredicted RBP3.26□□□□□ -1.89
NUCKS1-202ENST00000464938 POP1Q99575 1024 aaKnown RBP3.26□□□□□ -1.89
NUCKS1-202ENST00000464938 ADAM19Q9H013 955 aa3.26□□□□□ -1.89
NUCKS1-202ENST00000464938 NLRP2Q9NX02 1062 aa3.26□□□□□ -1.89
NUCKS1-202ENST00000464938 TRAK1Q9UPV9 953 aa3.26□□□□□ -1.89
NUCKS1-202ENST00000464938 C9orf172C9J069 976 aa3.25□□□□□ -1.89
NUCKS1-202ENST00000464938 PDE2AO00408 941 aaPredicted RBP3.25□□□□□ -1.89
NUCKS1-202ENST00000464938 TM4SF5O14894 197 aa3.25□□□□□ -1.89
NUCKS1-202ENST00000464938 TRPA1O75762 1119 aa3.25□□□□□ -1.89
NUCKS1-202ENST00000464938 XRCC5P13010 732 aaKnown RBP3.25□□□□□ -1.89
NUCKS1-202ENST00000464938 ELNP15502 786 aa3.25□□□□□ -1.89
NUCKS1-202ENST00000464938 EIF4BP23588 611 aaKnown RBP3.25□□□□□ -1.89
NUCKS1-202ENST00000464938 ITGAEP38570 1179 aa3.25□□□□□ -1.89
NUCKS1-202ENST00000464938 GRIA4P48058 902 aa3.25□□□□□ -1.89
NUCKS1-202ENST00000464938 ST13P50502 369 aaKnown RBP3.25□□□□□ -1.89
NUCKS1-202ENST00000464938 ATP11AP98196 1134 aa3.25□□□□□ -1.89
NUCKS1-202ENST00000464938 MLLT1Q03111 559 aaPredicted RBP3.25□□□□□ -1.89
NUCKS1-202ENST00000464938 RPS26P11Q5JNZ5 115 aaPredicted RBP3.25□□□□□ -1.89
NUCKS1-202ENST00000464938 HFE2Q6ZVN8 426 aa3.25□□□□□ -1.89
NUCKS1-202ENST00000464938 FAM35AQ86V20 835 aa3.25□□□□□ -1.89
NUCKS1-202ENST00000464938 METTL16Q86W50 562 aaKnown RBP3.25□□□□□ -1.89
NUCKS1-202ENST00000464938 CACTIN-AS1Q8N1I8 211 aa3.25□□□□□ -1.89
NUCKS1-202ENST00000464938 PLD4Q96BZ4 506 aa3.25□□□□□ -1.89
NUCKS1-202ENST00000464938 LENG1Q96BZ8 264 aaPredicted RBP3.25□□□□□ -1.89
NUCKS1-202ENST00000464938 CRELD1Q96HD1 420 aa3.25□□□□□ -1.89
NUCKS1-202ENST00000464938 UBE2OQ9C0C9 1292 aaKnown RBP3.25□□□□□ -1.89
NUCKS1-202ENST00000464938 EHD4Q9H223 541 aa3.25□□□□□ -1.89
NUCKS1-202ENST00000464938 RASSF4Q9H2L5 321 aa3.25□□□□□ -1.89
NUCKS1-202ENST00000464938 LIN7BQ9HAP6 207 aa3.25□□□□□ -1.89
NUCKS1-202ENST00000464938 METTL5Q9NRN9 209 aaKnown RBP3.25□□□□□ -1.89
NUCKS1-202ENST00000464938 FAM8A1Q9UBU6 413 aa3.25□□□□□ -1.89
NUCKS1-202ENST00000464938 SOX13Q9UN79 622 aa3.25□□□□□ -1.89
NUCKS1-202ENST00000464938 A0A096LPE4 126 aa3.24□□□□□ -1.89
NUCKS1-202ENST00000464938 A0A1W2PPZ6 126 aa3.24□□□□□ -1.89
NUCKS1-202ENST00000464938 SCAMP3O14828 347 aaKnown RBP3.24□□□□□ -1.89
NUCKS1-202ENST00000464938 COBLO75128 1261 aa3.24□□□□□ -1.89
NUCKS1-202ENST00000464938 GADD45BO75293 160 aaPredicted RBP3.24□□□□□ -1.89
NUCKS1-202ENST00000464938 GHRHP01286 108 aa3.24□□□□□ -1.89
NUCKS1-202ENST00000464938 CPB1P15086 417 aa3.24□□□□□ -1.89
NUCKS1-202ENST00000464938 GSTT1P30711 240 aa3.24□□□□□ -1.89
NUCKS1-202ENST00000464938 FANCCQ00597 558 aa3.24□□□□□ -1.89
NUCKS1-202ENST00000464938 TRIM28Q13263 835 aaKnown RBP3.24□□□□□ -1.89
NUCKS1-202ENST00000464938 SPRED3Q2MJR0 410 aa3.24□□□□□ -1.89
NUCKS1-202ENST00000464938 VN1R5Q7Z5H4 357 aa3.24□□□□□ -1.89
NUCKS1-202ENST00000464938 SPACA7Q96KW9 195 aa3.24□□□□□ -1.89
NUCKS1-202ENST00000464938 ZFYVE1Q9HBF4 777 aa3.24□□□□□ -1.89
NUCKS1-202ENST00000464938 PPP4R2Q9NY27 417 aa3.24□□□□□ -1.89
NUCKS1-202ENST00000464938 PPM1HQ9ULR3 514 aa3.24□□□□□ -1.89
NUCKS1-202ENST00000464938 A0A0A0MRY4 1105 aa3.23□□□□□ -1.89
NUCKS1-202ENST00000464938 METTL12A8MUP2 240 aa3.23□□□□□ -1.89
NUCKS1-202ENST00000464938 PAX4O43316 350 aa3.23□□□□□ -1.89
NUCKS1-202ENST00000464938 SMNDC1O75940 238 aaKnown RBP eCLIP3.23□□□□□ -1.89
NUCKS1-202ENST00000464938 USP17L7P0C7H9 530 aa3.23□□□□□ -1.89
NUCKS1-202ENST00000464938 TCF3P15923 654 aa3.23□□□□□ -1.89
NUCKS1-202ENST00000464938 EIF2AK2P19525 551 aaKnown RBP3.23□□□□□ -1.89
NUCKS1-202ENST00000464938 ALAS2P22557 587 aa3.23□□□□□ -1.89
NUCKS1-202ENST00000464938 TXKP42681 527 aa3.23□□□□□ -1.89
NUCKS1-202ENST00000464938 AFF1P51825 1210 aaKnown RBP3.23□□□□□ -1.89
NUCKS1-202ENST00000464938 HDLBPQ00341 1268 aaKnown RBP3.23□□□□□ -1.89
NUCKS1-202ENST00000464938 NRG1Q02297 640 aaPredicted RBP3.23□□□□□ -1.89
NUCKS1-202ENST00000464938 TAF1CQ15572 869 aaPredicted RBP3.23□□□□□ -1.89
NUCKS1-202ENST00000464938 MEI1Q5TIA1 1274 aa3.23□□□□□ -1.89
NUCKS1-202ENST00000464938 CEP135Q66GS9 1140 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms