RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 FAM205AQ6ZU69 1335 aa17.91■□□□□ 0.46
SQSTM1-205ENST00000464493 USP17L8P0C7I0 530 aa17.9■□□□□ 0.46
SQSTM1-205ENST00000464493 ADORA1P30542 326 aa17.9■□□□□ 0.46
SQSTM1-205ENST00000464493 FKBP1AP62942 108 aaKnown RBP17.9■□□□□ 0.46
SQSTM1-205ENST00000464493 SMC1BQ8NDV3 1235 aa17.9■□□□□ 0.46
SQSTM1-205ENST00000464493 GNL3LQ9NVN8 582 aaKnown RBP17.9■□□□□ 0.46
SQSTM1-205ENST00000464493 ZNF646O15015 1829 aaPredicted RBP17.9■□□□□ 0.46
SQSTM1-205ENST00000464493 ZNF280AP59817 542 aaPredicted RBP17.89■□□□□ 0.45
SQSTM1-205ENST00000464493 FSTL1Q12841 308 aa17.89■□□□□ 0.45
SQSTM1-205ENST00000464493 TNNI3KQ59H18 835 aa17.89■□□□□ 0.45
SQSTM1-205ENST00000464493 CCDC102BQ68D86 513 aa17.89■□□□□ 0.45
SQSTM1-205ENST00000464493 SAMD7Q7Z3H4 446 aa17.89■□□□□ 0.45
SQSTM1-205ENST00000464493 OGFOD1Q8N543 542 aa17.89■□□□□ 0.45
SQSTM1-205ENST00000464493 FPGT-TNNI3KV9GXZ4 949 aa17.89■□□□□ 0.45
SQSTM1-205ENST00000464493 PHKA1P46020 1223 aa17.88■□□□□ 0.45
SQSTM1-205ENST00000464493 MMP14P50281 582 aa17.88■□□□□ 0.45
SQSTM1-205ENST00000464493 CHAF1AQ13111 956 aaPredicted RBP17.88■□□□□ 0.45
SQSTM1-205ENST00000464493 TBC1D10BQ4KMP7 808 aaPredicted RBP17.88■□□□□ 0.45
SQSTM1-205ENST00000464493 GORABQ5T7V8 394 aa17.88■□□□□ 0.45
SQSTM1-205ENST00000464493 RBM26Q5T8P6 1007 aaKnown RBP17.88■□□□□ 0.45
SQSTM1-205ENST00000464493 CHADLQ6NUI6 762 aa17.88■□□□□ 0.45
SQSTM1-205ENST00000464493 KIAA0825Q8IV33 1275 aa17.88■□□□□ 0.45
SQSTM1-205ENST00000464493 CERS5Q8N5B7 392 aa17.88■□□□□ 0.45
SQSTM1-205ENST00000464493 TRPM4Q8TD43 1214 aa17.88■□□□□ 0.45
SQSTM1-205ENST00000464493 PCDHB15Q9Y5E8 787 aa17.88■□□□□ 0.45
SQSTM1-205ENST00000464493 ARAP2Q8WZ64 1704 aa17.87■□□□□ 0.45
SQSTM1-205ENST00000464493 RAB11FIP3O75154 756 aa17.87■□□□□ 0.45
SQSTM1-205ENST00000464493 HIRAP54198 1017 aaPredicted RBP17.87■□□□□ 0.45
SQSTM1-205ENST00000464493 AAMPQ13685 434 aa17.87■□□□□ 0.45
SQSTM1-205ENST00000464493 MFSD14BQ5SR56 506 aa17.87■□□□□ 0.45
SQSTM1-205ENST00000464493 RHPN1Q8TCX5 695 aa17.87■□□□□ 0.45
SQSTM1-205ENST00000464493 HDAC9Q9UKV0 1011 aa17.87■□□□□ 0.45
SQSTM1-205ENST00000464493 APBB1O00213 710 aa17.86■□□□□ 0.45
SQSTM1-205ENST00000464493 SEMA3EO15041 775 aa17.86■□□□□ 0.45
SQSTM1-205ENST00000464493 EGFRP00533 1210 aa17.86■□□□□ 0.45
SQSTM1-205ENST00000464493 TBC1D22AQ8WUA7 517 aa17.86■□□□□ 0.45
SQSTM1-205ENST00000464493 KIF1BPQ96EK5 621 aa17.86■□□□□ 0.45
SQSTM1-205ENST00000464493 MYOZ2Q9NPC6 264 aa17.86■□□□□ 0.45
SQSTM1-205ENST00000464493 ADAMTSL1Q8N6G6 1762 aa17.86■□□□□ 0.45
SQSTM1-205ENST00000464493 F8W031 263 aaPredicted RBP17.85■□□□□ 0.45
SQSTM1-205ENST00000464493 ZBTB22O15209 634 aa17.85■□□□□ 0.45
SQSTM1-205ENST00000464493 KIF4BQ2VIQ3 1234 aa17.85■□□□□ 0.45
SQSTM1-205ENST00000464493 EXOC6Q8TAG9 804 aa17.85■□□□□ 0.45
SQSTM1-205ENST00000464493 WDR66Q8TBY9 1149 aa17.85■□□□□ 0.45
SQSTM1-205ENST00000464493 ZC3H15Q8WU90 426 aaKnown RBP17.85■□□□□ 0.45
SQSTM1-205ENST00000464493 EAF2Q96CJ1 260 aaPredicted RBP17.85■□□□□ 0.45
SQSTM1-205ENST00000464493 DENND2AQ9ULE3 1009 aa17.85■□□□□ 0.45
SQSTM1-205ENST00000464493 MYH13Q9UKX3 1938 aa17.84■□□□□ 0.45
SQSTM1-205ENST00000464493 MAP1SQ66K74 1059 aaPredicted RBP17.84■□□□□ 0.45
SQSTM1-205ENST00000464493 DBNDD2Q9BQY9 259 aa17.84■□□□□ 0.45
SQSTM1-205ENST00000464493 CCDC8Q9H0W5 538 aaPredicted RBP17.84■□□□□ 0.45
SQSTM1-205ENST00000464493 DCTPP1Q9H773 170 aa17.84■□□□□ 0.45
SQSTM1-205ENST00000464493 IL1RAPL2Q9NP60 686 aa17.84■□□□□ 0.45
SQSTM1-205ENST00000464493 PGAP2Q9UHJ9 254 aa17.84■□□□□ 0.45
SQSTM1-205ENST00000464493 CCDC158Q5M9N0 1113 aa17.83■□□□□ 0.44
SQSTM1-205ENST00000464493 CNTROBQ8N137 903 aa17.83■□□□□ 0.44
SQSTM1-205ENST00000464493 CLASRPQ8N2M8 674 aaKnown RBP17.83■□□□□ 0.44
SQSTM1-205ENST00000464493 TTF2Q9UNY4 1162 aaKnown RBP17.83■□□□□ 0.44
SQSTM1-205ENST00000464493 UQCRFS1P1P0C7P4 283 aa17.82■□□□□ 0.44
SQSTM1-205ENST00000464493 RASGRF1Q13972 1273 aa17.82■□□□□ 0.44
SQSTM1-205ENST00000464493 SCARF1Q14162 830 aa17.82■□□□□ 0.44
SQSTM1-205ENST00000464493 AACSQ86V21 672 aa17.82■□□□□ 0.44
SQSTM1-205ENST00000464493 DBNLQ9UJU6 430 aaKnown RBP17.82■□□□□ 0.44
SQSTM1-205ENST00000464493 SUGT1Q9Y2Z0 365 aa17.82■□□□□ 0.44
SQSTM1-205ENST00000464493 COL1A1P02452 1464 aaPredicted RBP17.82■□□□□ 0.44
SQSTM1-205ENST00000464493 ITGBL1O95965 494 aaPredicted RBP17.81■□□□□ 0.44
SQSTM1-205ENST00000464493 ARID4AP29374 1257 aaPredicted RBP17.81■□□□□ 0.44
SQSTM1-205ENST00000464493 IRX6P78412 446 aaPredicted RBP17.81■□□□□ 0.44
SQSTM1-205ENST00000464493 GRIK5Q16478 980 aa17.81■□□□□ 0.44
SQSTM1-205ENST00000464493 TTC39AQ5SRH9 613 aa17.81■□□□□ 0.44
SQSTM1-205ENST00000464493 LRRCC1Q9C099 1032 aa17.81■□□□□ 0.44
SQSTM1-205ENST00000464493 BCL11AQ9H165 835 aa17.81■□□□□ 0.44
SQSTM1-205ENST00000464493 TLR7Q9NYK1 1049 aaKnown RBP17.81■□□□□ 0.44
SQSTM1-205ENST00000464493 PDS5AQ29RF7 1337 aaKnown RBP17.8■□□□□ 0.44
SQSTM1-205ENST00000464493 WNT10BO00744 389 aa17.8■□□□□ 0.44
SQSTM1-205ENST00000464493 DLGAP5Q15398 846 aa17.8■□□□□ 0.44
SQSTM1-205ENST00000464493 NBPF9Q3BBW0 867 aa17.8■□□□□ 0.44
SQSTM1-205ENST00000464493 SPATA5Q8NB90 893 aa17.8■□□□□ 0.44
SQSTM1-205ENST00000464493 MTMR14Q8NCE2 650 aa17.8■□□□□ 0.44
SQSTM1-205ENST00000464493 HMG20BQ9P0W2 317 aa17.8■□□□□ 0.44
SQSTM1-205ENST00000464493 SALL1Q9NSC2 1324 aa17.79■□□□□ 0.44
SQSTM1-205ENST00000464493 IFIT2P09913 472 aaKnown RBP17.79■□□□□ 0.44
SQSTM1-205ENST00000464493 RBM5P52756 815 aaKnown RBP eCLIP17.79■□□□□ 0.44
SQSTM1-205ENST00000464493 HDAC1Q13547 482 aaPredicted RBP17.79■□□□□ 0.44
SQSTM1-205ENST00000464493 CFAP100Q494V2 611 aa17.79■□□□□ 0.44
SQSTM1-205ENST00000464493 ZGPATQ8N5A5 531 aaKnown RBP17.79■□□□□ 0.44
SQSTM1-205ENST00000464493 DCPSQ96C86 337 aaKnown RBP17.79■□□□□ 0.44
SQSTM1-205ENST00000464493 ZBED3Q96IU2 234 aaPredicted RBP17.79■□□□□ 0.44
SQSTM1-205ENST00000464493 ZNF512BQ96KM6 892 aaPredicted RBP17.79■□□□□ 0.44
SQSTM1-205ENST00000464493 SERPINA10Q9UK55 444 aa17.79■□□□□ 0.44
SQSTM1-205ENST00000464493 POLR2AP24928 1970 aaKnown RBP17.79■□□□□ 0.44
SQSTM1-205ENST00000464493 ASTN2O75129 1339 aaPredicted RBP17.78■□□□□ 0.44
SQSTM1-205ENST00000464493 SMARCA5O60264 1052 aaPredicted RBP17.78■□□□□ 0.44
SQSTM1-205ENST00000464493 LDHBP07195 334 aaKnown RBP17.78■□□□□ 0.44
SQSTM1-205ENST00000464493 HSPA6P17066 643 aa17.78■□□□□ 0.44
SQSTM1-205ENST00000464493 MCAMP43121 646 aa17.78■□□□□ 0.44
SQSTM1-205ENST00000464493 HDLBPQ00341 1268 aaKnown RBP17.78■□□□□ 0.44
SQSTM1-205ENST00000464493 ANGEL2Q5VTE6 544 aaKnown RBP17.78■□□□□ 0.44
SQSTM1-205ENST00000464493 CDC37L1Q7L3B6 337 aa17.78■□□□□ 0.44
SQSTM1-205ENST00000464493 MRIQ9BWK5 157 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms