RNA–Protein interactions for RNA: ENST00000463503.5

SSR3-202, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-202ENST00000463503 CCDC191Q8NCU4 936 aa14.29□□□□□ -0.12
SSR3-202ENST00000463503 MYD88Q99836 296 aa14.29□□□□□ -0.12
SSR3-202ENST00000463503 PCDHAC2Q9Y5I4 1007 aa14.29□□□□□ -0.12
SSR3-202ENST00000463503 ZNF804BA4D1E1 1349 aa14.29□□□□□ -0.12
SSR3-202ENST00000463503 AOX1Q06278 1338 aa14.29□□□□□ -0.12
SSR3-202ENST00000463503 VCANP13611 3396 aa14.29□□□□□ -0.12
SSR3-202ENST00000463503 CACNA1FO60840 1977 aa14.29□□□□□ -0.12
SSR3-202ENST00000463503 CTSWP56202 376 aa14.28□□□□□ -0.12
SSR3-202ENST00000463503 SLC9C1Q4G0N8 1177 aa14.28□□□□□ -0.12
SSR3-202ENST00000463503 ZBED9Q6R2W3 1325 aa14.28□□□□□ -0.12
SSR3-202ENST00000463503 RIC3Q7Z5B4 369 aa14.28□□□□□ -0.12
SSR3-202ENST00000463503 CERS5Q8N5B7 392 aa14.28□□□□□ -0.12
SSR3-202ENST00000463503 TMEM106CQ9BVX2 250 aa14.28□□□□□ -0.12
SSR3-202ENST00000463503 PRO3102Q9H379 93 aa14.28□□□□□ -0.12
SSR3-202ENST00000463503 PHAXQ9H814 394 aaKnown RBP14.28□□□□□ -0.12
SSR3-202ENST00000463503 BSDC1Q9NW68 430 aaPredicted RBP14.28□□□□□ -0.12
SSR3-202ENST00000463503 PPP2R3BQ9Y5P8 575 aa14.28□□□□□ -0.12
SSR3-202ENST00000463503 IRS2Q9Y4H2 1338 aa14.27□□□□□ -0.12
SSR3-202ENST00000463503 DLL1O00548 723 aa14.27□□□□□ -0.13
SSR3-202ENST00000463503 GOLGA2Q08379 1002 aa14.27□□□□□ -0.13
SSR3-202ENST00000463503 NEUROD2Q15784 382 aa14.27□□□□□ -0.13
SSR3-202ENST00000463503 DUSP27Q5VZP5 1158 aa14.27□□□□□ -0.13
SSR3-202ENST00000463503 TTLL5Q6EMB2 1281 aa14.27□□□□□ -0.13
SSR3-202ENST00000463503 MTMR14Q8NCE2 650 aa14.27□□□□□ -0.13
SSR3-202ENST00000463503 SHISA4Q96DD7 197 aa14.27□□□□□ -0.13
SSR3-202ENST00000463503 CDC5LQ99459 802 aaKnown RBP14.27□□□□□ -0.13
SSR3-202ENST00000463503 GREM2Q9H772 168 aa14.27□□□□□ -0.13
SSR3-202ENST00000463503 CWC25Q9NXE8 425 aaPredicted RBP14.27□□□□□ -0.13
SSR3-202ENST00000463503 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.27□□□□□ -0.13
SSR3-202ENST00000463503 RBM27Q9P2N5 1060 aaKnown RBP14.27□□□□□ -0.13
SSR3-202ENST00000463503 EYSQ5T1H1 3165 aa14.27□□□□□ -0.13
SSR3-202ENST00000463503 LAMA2P24043 3122 aaKnown RBP14.27□□□□□ -0.13
SSR3-202ENST00000463503 PPP1R12BO60237 982 aaPredicted RBP14.26□□□□□ -0.13
SSR3-202ENST00000463503 ZNF853P0CG23 659 aa14.26□□□□□ -0.13
SSR3-202ENST00000463503 HNRNPUQ00839 825 aaKnown RBP eCLIP14.26□□□□□ -0.13
SSR3-202ENST00000463503 TTLL11Q8NHH1 800 aa14.26□□□□□ -0.13
SSR3-202ENST00000463503 MS4A4AQ96JQ5 239 aa14.26□□□□□ -0.13
SSR3-202ENST00000463503 USP2O75604 605 aaPredicted RBP14.25□□□□□ -0.13
SSR3-202ENST00000463503 GTF2IP78347 998 aa14.25□□□□□ -0.13
SSR3-202ENST00000463503 NBPF12Q5TAG4 269 aaPredicted RBP14.25□□□□□ -0.13
SSR3-202ENST00000463503 OTUD7BQ6GQQ9 843 aa14.25□□□□□ -0.13
SSR3-202ENST00000463503 IFT57Q9NWB7 429 aa14.25□□□□□ -0.13
SSR3-202ENST00000463503 LAS1LQ9Y4W2 734 aaKnown RBP14.25□□□□□ -0.13
SSR3-202ENST00000463503 CLRN2A0PK11 232 aa14.24□□□□□ -0.13
SSR3-202ENST00000463503 SPDYE2BA6NHP3 402 aa14.24□□□□□ -0.13
SSR3-202ENST00000463503 SPDYE6P0CI01 402 aa14.24□□□□□ -0.13
SSR3-202ENST00000463503 DLGAP5Q15398 846 aa14.24□□□□□ -0.13
SSR3-202ENST00000463503 SLC4A8Q2Y0W8 1093 aa14.24□□□□□ -0.13
SSR3-202ENST00000463503 NBPF11Q86T75 865 aa14.24□□□□□ -0.13
SSR3-202ENST00000463503 ANKRD13AQ8IZ07 590 aa14.24□□□□□ -0.13
SSR3-202ENST00000463503 SH3TC2Q8TF17 1288 aa14.24□□□□□ -0.13
SSR3-202ENST00000463503 BRI3BPQ8WY22 251 aa14.24□□□□□ -0.13
SSR3-202ENST00000463503 OPTNQ96CV9 577 aa14.24□□□□□ -0.13
SSR3-202ENST00000463503 METTL22Q9BUU2 404 aaPredicted RBP14.24□□□□□ -0.13
SSR3-202ENST00000463503 LEMD3Q9Y2U8 911 aa14.24□□□□□ -0.13
SSR3-202ENST00000463503 SPTBN5Q9NRC6 3674 aaKnown RBP14.23□□□□□ -0.13
SSR3-202ENST00000463503 MYCP01106 439 aaPredicted RBP14.23□□□□□ -0.13
SSR3-202ENST00000463503 IREB2P48200 963 aaKnown RBP14.23□□□□□ -0.13
SSR3-202ENST00000463503 GNAI1P63096 354 aa14.23□□□□□ -0.13
SSR3-202ENST00000463503 CNKSR2Q8WXI2 1034 aa14.23□□□□□ -0.13
SSR3-202ENST00000463503 ARHGAP39Q9C0H5 1083 aa14.23□□□□□ -0.13
SSR3-202ENST00000463503 MBIPQ9NS73 344 aa14.23□□□□□ -0.13
SSR3-202ENST00000463503 PTPRFP10586 1907 aa14.22□□□□□ -0.13
SSR3-202ENST00000463503 MYH13Q9UKX3 1938 aa14.22□□□□□ -0.13
SSR3-202ENST00000463503 IGKV5-2P06315 115 aa14.22□□□□□ -0.13
SSR3-202ENST00000463503 SUPT20HL1Q3ZLR7 823 aa14.22□□□□□ -0.13
SSR3-202ENST00000463503 UBE2Q1Q7Z7E8 422 aa14.22□□□□□ -0.13
SSR3-202ENST00000463503 CDAN1Q8IWY9 1227 aa14.22□□□□□ -0.13
SSR3-202ENST00000463503 SLC17A8Q8NDX2 589 aa14.22□□□□□ -0.13
SSR3-202ENST00000463503 PRMT6Q96LA8 375 aaPredicted RBP14.22□□□□□ -0.13
SSR3-202ENST00000463503 ELP3Q9H9T3 547 aa14.22□□□□□ -0.13
SSR3-202ENST00000463503 CD209Q9NNX6 404 aa14.22□□□□□ -0.13
SSR3-202ENST00000463503 TAF1CQ15572 869 aaPredicted RBP14.21□□□□□ -0.13
SSR3-202ENST00000463503 CFAP100Q494V2 611 aa14.21□□□□□ -0.13
SSR3-202ENST00000463503 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.21□□□□□ -0.13
SSR3-202ENST00000463503 TRMT2AQ8IZ69 625 aaKnown RBP14.21□□□□□ -0.13
SSR3-202ENST00000463503 FAM43AQ8N2R8 423 aa14.21□□□□□ -0.13
SSR3-202ENST00000463503 CCL15-CCL14A0A0B4J2E2 113 aa14.2□□□□□ -0.14
SSR3-202ENST00000463503 E9PSI1 815 aa14.2□□□□□ -0.14
SSR3-202ENST00000463503 RASA3Q14644 834 aa14.2□□□□□ -0.14
SSR3-202ENST00000463503 CCL15Q16663 113 aa14.2□□□□□ -0.14
SSR3-202ENST00000463503 TEPSINQ96N21 525 aa14.2□□□□□ -0.14
SSR3-202ENST00000463503 VEZTQ9HBM0 779 aa14.2□□□□□ -0.14
SSR3-202ENST00000463503 LACTBP83111 547 aaPredicted RBP14.19□□□□□ -0.14
SSR3-202ENST00000463503 SLFN5Q08AF3 891 aa14.19□□□□□ -0.14
SSR3-202ENST00000463503 VGLL4Q14135 290 aa14.19□□□□□ -0.14
SSR3-202ENST00000463503 MTFR1Q15390 333 aa14.19□□□□□ -0.14
SSR3-202ENST00000463503 MYH16Q9H6N6 1097 aa14.19□□□□□ -0.14
SSR3-202ENST00000463503 ZFYVE28Q9HCC9 887 aa14.19□□□□□ -0.14
SSR3-202ENST00000463503 MAP3K2Q9Y2U5 619 aa14.19□□□□□ -0.14
SSR3-202ENST00000463503 SALL2Q9Y467 1007 aaPredicted RBP14.19□□□□□ -0.14
SSR3-202ENST00000463503 PRUNE2Q8WUY3 3088 aa14.18□□□□□ -0.14
SSR3-202ENST00000463503 F8W031 263 aaPredicted RBP14.18□□□□□ -0.14
SSR3-202ENST00000463503 SNAP23O00161 211 aa14.18□□□□□ -0.14
SSR3-202ENST00000463503 SOX1O00570 391 aaPredicted RBP14.18□□□□□ -0.14
SSR3-202ENST00000463503 MYO1BO43795 1136 aa14.18□□□□□ -0.14
SSR3-202ENST00000463503 CTGFP29279 349 aa14.18□□□□□ -0.14
SSR3-202ENST00000463503 ARHGEF6Q15052 776 aa14.18□□□□□ -0.14
SSR3-202ENST00000463503 C15orf52Q6ZUT6 534 aaKnown RBP14.18□□□□□ -0.14
SSR3-202ENST00000463503 ANKRD2Q9GZV1 360 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms