RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 IFNL1Q8IU54 200 aa13.92□□□□□ -0.18
CBX3-205ENST00000462165 MTMR14Q8NCE2 650 aa13.92□□□□□ -0.18
CBX3-205ENST00000462165 DEFB129Q9H1M3 183 aa13.92□□□□□ -0.18
CBX3-205ENST00000462165 CD209Q9NNX6 404 aa13.92□□□□□ -0.18
CBX3-205ENST00000462165 FZD1Q9UP38 647 aa13.92□□□□□ -0.18
CBX3-205ENST00000462165 SSC5DA1L4H1 1573 aa13.92□□□□□ -0.18
CBX3-205ENST00000462165 UNCXA6NJT0 531 aa13.91□□□□□ -0.18
CBX3-205ENST00000462165 CSF1RP07333 972 aa13.91□□□□□ -0.18
CBX3-205ENST00000462165 CASP7P55210 303 aa13.91□□□□□ -0.18
CBX3-205ENST00000462165 DLGAP5Q15398 846 aa13.91□□□□□ -0.18
CBX3-205ENST00000462165 INTS3Q68E01 1043 aaKnown RBP13.91□□□□□ -0.18
CBX3-205ENST00000462165 SLC10A4Q96EP9 437 aa13.91□□□□□ -0.18
CBX3-205ENST00000462165 MPHOSPH8Q99549 860 aa13.91□□□□□ -0.18
CBX3-205ENST00000462165 STK31Q9BXU1 1019 aa13.91□□□□□ -0.18
CBX3-205ENST00000462165 PRKRIP1Q9H875 184 aaPredicted RBP13.91□□□□□ -0.18
CBX3-205ENST00000462165 PPP2R3BQ9Y5P8 575 aa13.91□□□□□ -0.18
CBX3-205ENST00000462165 PPP1R12BO60237 982 aaPredicted RBP13.9□□□□□ -0.18
CBX3-205ENST00000462165 KCNJ4P48050 445 aa13.9□□□□□ -0.18
CBX3-205ENST00000462165 CHRNDQ07001 517 aa13.9□□□□□ -0.18
CBX3-205ENST00000462165 GCKRQ14397 625 aa13.9□□□□□ -0.18
CBX3-205ENST00000462165 OTOP1Q7RTM1 612 aa13.9□□□□□ -0.18
CBX3-205ENST00000462165 CERS5Q8N5B7 392 aa13.9□□□□□ -0.18
CBX3-205ENST00000462165 WNK4Q96J92 1243 aa13.9□□□□□ -0.18
CBX3-205ENST00000462165 TRIM17Q9Y577 477 aa13.9□□□□□ -0.18
CBX3-205ENST00000462165 IRS2Q9Y4H2 1338 aa13.9□□□□□ -0.19
CBX3-205ENST00000462165 IGF2BP3O00425 579 aaKnown RBP eCLIP13.89□□□□□ -0.19
CBX3-205ENST00000462165 C15orf52Q6ZUT6 534 aaKnown RBP13.89□□□□□ -0.19
CBX3-205ENST00000462165 G2E3Q7L622 706 aa13.89□□□□□ -0.19
CBX3-205ENST00000462165 OTOFQ9HC10 1997 aa13.89□□□□□ -0.19
CBX3-205ENST00000462165 MYO1BO43795 1136 aa13.88□□□□□ -0.19
CBX3-205ENST00000462165 FKBP1AP62942 108 aaKnown RBP13.88□□□□□ -0.19
CBX3-205ENST00000462165 SUPT20HL1Q3ZLR7 823 aa13.88□□□□□ -0.19
CBX3-205ENST00000462165 TSR2Q969E8 191 aaKnown RBP13.88□□□□□ -0.19
CBX3-205ENST00000462165 ERO1AQ96HE7 468 aa13.88□□□□□ -0.19
CBX3-205ENST00000462165 CLMNQ96JQ2 1002 aa13.88□□□□□ -0.19
CBX3-205ENST00000462165 ANKRD18BA2A2Z9 1011 aa13.87□□□□□ -0.19
CBX3-205ENST00000462165 POTEFA5A3E0 1075 aa13.87□□□□□ -0.19
CBX3-205ENST00000462165 SPDYE2BA6NHP3 402 aa13.87□□□□□ -0.19
CBX3-205ENST00000462165 SPDYE6P0CI01 402 aa13.87□□□□□ -0.19
CBX3-205ENST00000462165 IL1R1P14778 569 aa13.87□□□□□ -0.19
CBX3-205ENST00000462165 TWISTNBQ3B726 338 aaPredicted RBP13.87□□□□□ -0.19
CBX3-205ENST00000462165 CFAP100Q494V2 611 aa13.87□□□□□ -0.19
CBX3-205ENST00000462165 MYH16Q9H6N6 1097 aa13.87□□□□□ -0.19
CBX3-205ENST00000462165 PTPN22Q9Y2R2 807 aa13.87□□□□□ -0.19
CBX3-205ENST00000462165 PCDHAC2Q9Y5I4 1007 aa13.87□□□□□ -0.19
CBX3-205ENST00000462165 KIAA0100Q14667 2235 aaKnown RBP13.87□□□□□ -0.19
CBX3-205ENST00000462165 CLRN2A0PK11 232 aa13.86□□□□□ -0.19
CBX3-205ENST00000462165 TESPA1A2RU30 521 aaPredicted RBP13.86□□□□□ -0.19
CBX3-205ENST00000462165 SNAP23O00161 211 aa13.86□□□□□ -0.19
CBX3-205ENST00000462165 TAF5LO75529 589 aa13.86□□□□□ -0.19
CBX3-205ENST00000462165 USP2O75604 605 aaPredicted RBP13.86□□□□□ -0.19
CBX3-205ENST00000462165 GJA5P36382 358 aa13.86□□□□□ -0.19
CBX3-205ENST00000462165 IREB2P48200 963 aaKnown RBP13.86□□□□□ -0.19
CBX3-205ENST00000462165 FLIIQ13045 1269 aa13.86□□□□□ -0.19
CBX3-205ENST00000462165 OTUD7BQ6GQQ9 843 aa13.86□□□□□ -0.19
CBX3-205ENST00000462165 PRMT6Q96LA8 375 aaPredicted RBP13.86□□□□□ -0.19
CBX3-205ENST00000462165 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.86□□□□□ -0.19
CBX3-205ENST00000462165 CRHR2Q13324 411 aa13.85□□□□□ -0.19
CBX3-205ENST00000462165 CCDC27Q2M243 656 aa13.85□□□□□ -0.19
CBX3-205ENST00000462165 HABP4Q5JVS0 413 aaKnown RBP13.85□□□□□ -0.19
CBX3-205ENST00000462165 NBPF12Q5TAG4 269 aaPredicted RBP13.85□□□□□ -0.19
CBX3-205ENST00000462165 ZNF804AQ7Z570 1209 aa13.85□□□□□ -0.19
CBX3-205ENST00000462165 ANKRD13AQ8IZ07 590 aa13.85□□□□□ -0.19
CBX3-205ENST00000462165 LINS1Q8NG48 757 aa13.85□□□□□ -0.19
CBX3-205ENST00000462165 CD99L2Q8TCZ2 262 aa13.85□□□□□ -0.19
CBX3-205ENST00000462165 DNAAF4Q8WXU2 420 aa13.85□□□□□ -0.19
CBX3-205ENST00000462165 ARMC5Q96C12 935 aa13.85□□□□□ -0.19
CBX3-205ENST00000462165 VEZTQ9HBM0 779 aa13.85□□□□□ -0.19
CBX3-205ENST00000462165 AOX1Q06278 1338 aa13.85□□□□□ -0.19
CBX3-205ENST00000462165 ARAP2Q8WZ64 1704 aa13.84□□□□□ -0.19
CBX3-205ENST00000462165 F8W031 263 aaPredicted RBP13.84□□□□□ -0.19
CBX3-205ENST00000462165 SP3Q02447 781 aa13.84□□□□□ -0.19
CBX3-205ENST00000462165 IFIT5Q13325 482 aaKnown RBP13.84□□□□□ -0.19
CBX3-205ENST00000462165 FKBP5Q13451 457 aaPredicted RBP13.84□□□□□ -0.19
CBX3-205ENST00000462165 HELBQ8NG08 1087 aaPredicted RBP13.84□□□□□ -0.19
CBX3-205ENST00000462165 PTPN18Q99952 460 aa13.84□□□□□ -0.19
CBX3-205ENST00000462165 EFCC1Q9HA90 598 aa13.84□□□□□ -0.19
CBX3-205ENST00000462165 FOXO4P98177 505 aa13.83□□□□□ -0.2
CBX3-205ENST00000462165 RASA3Q14644 834 aa13.83□□□□□ -0.2
CBX3-205ENST00000462165 RBM5P52756 815 aaKnown RBP eCLIP13.82□□□□□ -0.2
CBX3-205ENST00000462165 CAP1Q01518 475 aa13.82□□□□□ -0.2
CBX3-205ENST00000462165 TNFAIP1Q13829 316 aa13.82□□□□□ -0.2
CBX3-205ENST00000462165 WWC1Q8IX03 1113 aa13.82□□□□□ -0.2
CBX3-205ENST00000462165 OPTNQ96CV9 577 aa13.82□□□□□ -0.2
CBX3-205ENST00000462165 IL16Q14005 1332 aa13.82□□□□□ -0.2
CBX3-205ENST00000462165 FAM205AQ6ZU69 1335 aa13.82□□□□□ -0.2
CBX3-205ENST00000462165 MYCNP04198 464 aaPredicted RBP13.81□□□□□ -0.2
CBX3-205ENST00000462165 EN2P19622 333 aaPredicted RBP13.81□□□□□ -0.2
CBX3-205ENST00000462165 SPDYE2Q495Y8 402 aa13.81□□□□□ -0.2
CBX3-205ENST00000462165 MS4A4AQ96JQ5 239 aa13.81□□□□□ -0.2
CBX3-205ENST00000462165 ELP3Q9H9T3 547 aa13.81□□□□□ -0.2
CBX3-205ENST00000462165 SERPINA10Q9UK55 444 aa13.81□□□□□ -0.2
CBX3-205ENST00000462165 JAG2Q9Y219 1238 aa13.81□□□□□ -0.2
CBX3-205ENST00000462165 ZNF333Q96JL9 665 aa13.8□□□□□ -0.2
CBX3-205ENST00000462165 TEPSINQ96N21 525 aa13.8□□□□□ -0.2
CBX3-205ENST00000462165 ZNF70Q9UC06 446 aaPredicted RBP13.8□□□□□ -0.2
CBX3-205ENST00000462165 CHMP3Q9Y3E7 222 aa13.8□□□□□ -0.2
CBX3-205ENST00000462165 UBE4AQ14139 1066 aa13.79□□□□□ -0.2
CBX3-205ENST00000462165 ARHGEF6Q15052 776 aa13.79□□□□□ -0.2
CBX3-205ENST00000462165 CCDC57Q2TAC2 916 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms