RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 IFFO2Q5TF58 517 aa4.88□□□□□ -1.63
ATP13A3-206ENST00000461660 C2CD5Q86YS7 1000 aa4.88□□□□□ -1.63
ATP13A3-206ENST00000461660 WDR66Q8TBY9 1149 aa4.88□□□□□ -1.63
ATP13A3-206ENST00000461660 MAP4K1Q92918 833 aa4.88□□□□□ -1.63
ATP13A3-206ENST00000461660 EYA3Q99504 573 aa4.88□□□□□ -1.63
ATP13A3-206ENST00000461660 DSCC1Q9BVC3 393 aa4.88□□□□□ -1.63
ATP13A3-206ENST00000461660 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.88□□□□□ -1.63
ATP13A3-206ENST00000461660 MAST3O60307 1309 aa4.87□□□□□ -1.63
ATP13A3-206ENST00000461660 GLI3P10071 1580 aa4.87□□□□□ -1.63
ATP13A3-206ENST00000461660 VPS37CA5D8V6 355 aaPredicted RBP4.87□□□□□ -1.63
ATP13A3-206ENST00000461660 MINDY4BA8MYZ0 360 aa4.87□□□□□ -1.63
ATP13A3-206ENST00000461660 BAG3O95817 575 aa4.87□□□□□ -1.63
ATP13A3-206ENST00000461660 LDHBP07195 334 aaKnown RBP4.87□□□□□ -1.63
ATP13A3-206ENST00000461660 SCARF1Q14162 830 aa4.87□□□□□ -1.63
ATP13A3-206ENST00000461660 POTEAQ6S8J7 498 aa4.87□□□□□ -1.63
ATP13A3-206ENST00000461660 DPP8Q6V1X1 898 aaPredicted RBP4.87□□□□□ -1.63
ATP13A3-206ENST00000461660 ZNF589Q86UQ0 364 aaPredicted RBP4.87□□□□□ -1.63
ATP13A3-206ENST00000461660 MIGA1Q8NAN2 632 aa4.87□□□□□ -1.63
ATP13A3-206ENST00000461660 BRIP1Q9BX63 1249 aa4.87□□□□□ -1.63
ATP13A3-206ENST00000461660 CRNKL1Q9BZJ0 848 aaKnown RBP4.87□□□□□ -1.63
ATP13A3-206ENST00000461660 TM6SF1Q9BZW5 370 aa4.87□□□□□ -1.63
ATP13A3-206ENST00000461660 RNF41Q9H4P4 317 aaPredicted RBP4.87□□□□□ -1.63
ATP13A3-206ENST00000461660 JAG2Q9Y219 1238 aa4.87□□□□□ -1.63
ATP13A3-206ENST00000461660 SLC4A4Q9Y6R1 1079 aa4.87□□□□□ -1.63
ATP13A3-206ENST00000461660 PPEF1O14829 653 aaPredicted RBP4.87□□□□□ -1.63
ATP13A3-206ENST00000461660 DHX16O60231 1041 aaKnown RBP4.87□□□□□ -1.63
ATP13A3-206ENST00000461660 NPR1P16066 1061 aa4.87□□□□□ -1.63
ATP13A3-206ENST00000461660 USP5P45974 858 aa4.87□□□□□ -1.63
ATP13A3-206ENST00000461660 STK3Q13188 491 aa4.87□□□□□ -1.63
ATP13A3-206ENST00000461660 VPS53Q5VIR6 699 aa4.87□□□□□ -1.63
ATP13A3-206ENST00000461660 CCDC83Q8IWF9 413 aa4.87□□□□□ -1.63
ATP13A3-206ENST00000461660 NCOA7Q8NI08 942 aa4.87□□□□□ -1.63
ATP13A3-206ENST00000461660 TCEANC2Q96MN5 208 aa4.87□□□□□ -1.63
ATP13A3-206ENST00000461660 PIH1D3Q9NQM4 214 aaKnown RBP4.87□□□□□ -1.63
ATP13A3-206ENST00000461660 GOLGA6L4A6NEF3 574 aa4.86□□□□□ -1.63
ATP13A3-206ENST00000461660 RIMBP2O15034 1052 aa4.86□□□□□ -1.63
ATP13A3-206ENST00000461660 ARID4AP29374 1257 aaPredicted RBP4.86□□□□□ -1.63
ATP13A3-206ENST00000461660 ADD2P35612 726 aa4.86□□□□□ -1.63
ATP13A3-206ENST00000461660 AK2P54819 239 aa4.86□□□□□ -1.63
ATP13A3-206ENST00000461660 GNL2Q13823 731 aaKnown RBP4.86□□□□□ -1.63
ATP13A3-206ENST00000461660 C3orf67Q6ZVT6 689 aa4.86□□□□□ -1.63
ATP13A3-206ENST00000461660 RUFY3Q7L099 469 aa4.86□□□□□ -1.63
ATP13A3-206ENST00000461660 COL23A1Q86Y22 540 aaPredicted RBP4.86□□□□□ -1.63
ATP13A3-206ENST00000461660 RASEFQ8IZ41 740 aa4.86□□□□□ -1.63
ATP13A3-206ENST00000461660 STK11IPQ8N1F8 1099 aa4.86□□□□□ -1.63
ATP13A3-206ENST00000461660 MPNDQ8N594 471 aa4.86□□□□□ -1.63
ATP13A3-206ENST00000461660 CNKSR1Q969H4 720 aa4.86□□□□□ -1.63
ATP13A3-206ENST00000461660 ZNF512BQ96KM6 892 aaPredicted RBP4.86□□□□□ -1.63
ATP13A3-206ENST00000461660 LARP6Q9BRS8 491 aaKnown RBP4.86□□□□□ -1.63
ATP13A3-206ENST00000461660 UBAC1Q9BSL1 405 aa4.86□□□□□ -1.63
ATP13A3-206ENST00000461660 ARMT1Q9H993 441 aa4.86□□□□□ -1.63
ATP13A3-206ENST00000461660 ITGB4P16144 1822 aa4.86□□□□□ -1.63
ATP13A3-206ENST00000461660 ARFGEF2Q9Y6D5 1785 aa4.86□□□□□ -1.63
ATP13A3-206ENST00000461660 WDR33Q9C0J8 1336 aaKnown RBP4.86□□□□□ -1.63
ATP13A3-206ENST00000461660 AFDNP55196 1824 aaKnown RBP4.86□□□□□ -1.63
ATP13A3-206ENST00000461660 CYP2E1P05181 493 aaPredicted RBP4.86□□□□□ -1.63
ATP13A3-206ENST00000461660 HSPD1P10809 573 aaKnown RBP4.86□□□□□ -1.63
ATP13A3-206ENST00000461660 CPA1P15085 419 aa4.86□□□□□ -1.63
ATP13A3-206ENST00000461660 MCM5P33992 734 aa4.86□□□□□ -1.63
ATP13A3-206ENST00000461660 EZH2Q15910 746 aaKnown RBP4.86□□□□□ -1.63
ATP13A3-206ENST00000461660 SLC15A2Q16348 729 aa4.86□□□□□ -1.63
ATP13A3-206ENST00000461660 CSPP1Q1MSJ5 1256 aa4.86□□□□□ -1.63
ATP13A3-206ENST00000461660 TPRNQ4KMQ1 711 aa4.86□□□□□ -1.63
ATP13A3-206ENST00000461660 OSBP2Q969R2 916 aa4.86□□□□□ -1.63
ATP13A3-206ENST00000461660 WWC3Q9ULE0 1092 aa4.86□□□□□ -1.63
ATP13A3-206ENST00000461660 ISY1Q9ULR0 285 aaKnown RBP4.86□□□□□ -1.63
ATP13A3-206ENST00000461660 RIC1Q4ADV7 1423 aa4.86□□□□□ -1.63
ATP13A3-206ENST00000461660 PAPPAQ13219 1627 aa4.86□□□□□ -1.63
ATP13A3-206ENST00000461660 UBR2Q8IWV8 1755 aa4.86□□□□□ -1.63
ATP13A3-206ENST00000461660 FGFR2P21802 821 aa4.86□□□□□ -1.63
ATP13A3-206ENST00000461660 RPS6KB1P23443 525 aa4.86□□□□□ -1.63
ATP13A3-206ENST00000461660 AKAP17AQ02040 695 aaKnown RBP4.86□□□□□ -1.63
ATP13A3-206ENST00000461660 ZNF827Q17R98 1081 aa4.86□□□□□ -1.63
ATP13A3-206ENST00000461660 FOXD4L6Q3SYB3 417 aaPredicted RBP4.86□□□□□ -1.63
ATP13A3-206ENST00000461660 FOXD4L3Q6VB84 417 aaPredicted RBP4.86□□□□□ -1.63
ATP13A3-206ENST00000461660 DHX32Q7L7V1 743 aaKnown RBP4.86□□□□□ -1.63
ATP13A3-206ENST00000461660 TBC1D22AQ8WUA7 517 aa4.86□□□□□ -1.63
ATP13A3-206ENST00000461660 BRF1Q92994 677 aa4.86□□□□□ -1.63
ATP13A3-206ENST00000461660 MASTLQ96GX5 879 aa4.86□□□□□ -1.63
ATP13A3-206ENST00000461660 CRAMP1Q96RY5 1269 aa4.86□□□□□ -1.63
ATP13A3-206ENST00000461660 TRIM34Q9BYJ4 488 aa4.86□□□□□ -1.63
ATP13A3-206ENST00000461660 SHANK3Q9BYB0 1731 aa4.85□□□□□ -1.63
ATP13A3-206ENST00000461660 CCDC69A6NI79 296 aa4.85□□□□□ -1.63
ATP13A3-206ENST00000461660 M0R2C6 588 aa4.85□□□□□ -1.63
ATP13A3-206ENST00000461660 DDR1Q08345 913 aa4.85□□□□□ -1.63
ATP13A3-206ENST00000461660 NECTIN1Q15223 517 aa4.85□□□□□ -1.63
ATP13A3-206ENST00000461660 MFSD6Q6ZSS7 791 aa4.85□□□□□ -1.63
ATP13A3-206ENST00000461660 VGLL2Q8N8G2 317 aa4.85□□□□□ -1.63
ATP13A3-206ENST00000461660 INTS4Q96HW7 963 aaKnown RBP4.85□□□□□ -1.63
ATP13A3-206ENST00000461660 LRRC2Q9BYS8 371 aa4.85□□□□□ -1.63
ATP13A3-206ENST00000461660 CNNM2Q9H8M5 875 aa4.85□□□□□ -1.63
ATP13A3-206ENST00000461660 MED23Q9ULK4 1368 aa4.85□□□□□ -1.63
ATP13A3-206ENST00000461660 VIRMAQ69YN4 1812 aaKnown RBP4.85□□□□□ -1.63
ATP13A3-206ENST00000461660 GOLGA8BA8MQT2 603 aa4.85□□□□□ -1.63
ATP13A3-206ENST00000461660 IFIT3O14879 490 aaKnown RBP4.85□□□□□ -1.63
ATP13A3-206ENST00000461660 POLR3DP05423 398 aaPredicted RBP4.85□□□□□ -1.63
ATP13A3-206ENST00000461660 PDIA4P13667 645 aaKnown RBP4.85□□□□□ -1.63
ATP13A3-206ENST00000461660 PLCG2P16885 1265 aa4.85□□□□□ -1.63
ATP13A3-206ENST00000461660 RBM5P52756 815 aaKnown RBP eCLIP4.85□□□□□ -1.63
ATP13A3-206ENST00000461660 TRIM29Q14134 588 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms