RNA–Protein interactions for RNA: ENST00000461098.1

HCFC1-204, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-204ENST00000461098 PPP1R12BO60237 982 aaPredicted RBP15.29■□□□□ 0.04
HCFC1-204ENST00000461098 USP2O75604 605 aaPredicted RBP15.29■□□□□ 0.04
HCFC1-204ENST00000461098 DLGAP5Q15398 846 aa15.29■□□□□ 0.04
HCFC1-204ENST00000461098 NBPF12Q5TAG4 269 aaPredicted RBP15.29■□□□□ 0.04
HCFC1-204ENST00000461098 ZNF333Q96JL9 665 aa15.29■□□□□ 0.04
HCFC1-204ENST00000461098 EFCC1Q9HA90 598 aa15.29■□□□□ 0.04
HCFC1-204ENST00000461098 OTOFQ9HC10 1997 aa15.28■□□□□ 0.04
HCFC1-204ENST00000461098 NEURL1BA8MQ27 555 aa15.28■□□□□ 0.04
HCFC1-204ENST00000461098 DDX58O95786 925 aaKnown RBP15.28■□□□□ 0.04
HCFC1-204ENST00000461098 SP3Q02447 781 aa15.28■□□□□ 0.04
HCFC1-204ENST00000461098 TSPYL6Q8N831 410 aa15.28■□□□□ 0.04
HCFC1-204ENST00000461098 MS4A4AQ96JQ5 239 aa15.28■□□□□ 0.04
HCFC1-204ENST00000461098 PRMT6Q96LA8 375 aaPredicted RBP15.28■□□□□ 0.04
HCFC1-204ENST00000461098 CLRN2A0PK11 232 aa15.27■□□□□ 0.04
HCFC1-204ENST00000461098 SPDYE2BA6NHP3 402 aa15.27■□□□□ 0.04
HCFC1-204ENST00000461098 CSF1RP07333 972 aa15.27■□□□□ 0.04
HCFC1-204ENST00000461098 SPDYE6P0CI01 402 aa15.27■□□□□ 0.04
HCFC1-204ENST00000461098 ITGA6P23229 1130 aa15.27■□□□□ 0.04
HCFC1-204ENST00000461098 IGHMBP2P38935 993 aaKnown RBP15.27■□□□□ 0.04
HCFC1-204ENST00000461098 CASP7P55210 303 aa15.27■□□□□ 0.04
HCFC1-204ENST00000461098 GNAI1P63096 354 aa15.27■□□□□ 0.04
HCFC1-204ENST00000461098 CHRNDQ07001 517 aa15.27■□□□□ 0.04
HCFC1-204ENST00000461098 CCDC30Q5VVM6 783 aa15.27■□□□□ 0.04
HCFC1-204ENST00000461098 UBE3BQ7Z3V4 1068 aa15.27■□□□□ 0.04
HCFC1-204ENST00000461098 PLA2G12BQ9BX93 195 aa15.27■□□□□ 0.04
HCFC1-204ENST00000461098 ANKRD2Q9GZV1 360 aa15.27■□□□□ 0.04
HCFC1-204ENST00000461098 WDR43Q15061 677 aaKnown RBP eCLIP15.26■□□□□ 0.03
HCFC1-204ENST00000461098 CFAP100Q494V2 611 aa15.26■□□□□ 0.03
HCFC1-204ENST00000461098 C15orf52Q6ZUT6 534 aaKnown RBP15.26■□□□□ 0.03
HCFC1-204ENST00000461098 OTUD5Q96G74 571 aa15.26■□□□□ 0.03
HCFC1-204ENST00000461098 A0A1B0GUL6 1792 aa15.26■□□□□ 0.03
HCFC1-204ENST00000461098 IL1R1P14778 569 aa15.25■□□□□ 0.03
HCFC1-204ENST00000461098 SUPT20HL1Q3ZLR7 823 aa15.25■□□□□ 0.03
HCFC1-204ENST00000461098 OTUD7BQ6GQQ9 843 aa15.25■□□□□ 0.03
HCFC1-204ENST00000461098 ANKRD13AQ8IZ07 590 aa15.25■□□□□ 0.03
HCFC1-204ENST00000461098 CEP290O15078 2479 aa15.25■□□□□ 0.03
HCFC1-204ENST00000461098 COL6A3P12111 3177 aa15.25■□□□□ 0.03
HCFC1-204ENST00000461098 F8W031 263 aaPredicted RBP15.24■□□□□ 0.03
HCFC1-204ENST00000461098 APAF1O14727 1248 aa15.24■□□□□ 0.03
HCFC1-204ENST00000461098 TAF5LO75529 589 aa15.24■□□□□ 0.03
HCFC1-204ENST00000461098 IREB2P48200 963 aaKnown RBP15.24■□□□□ 0.03
HCFC1-204ENST00000461098 FKBP1AP62942 108 aaKnown RBP15.24■□□□□ 0.03
HCFC1-204ENST00000461098 RASA3Q14644 834 aa15.24■□□□□ 0.03
HCFC1-204ENST00000461098 G2E3Q7L622 706 aa15.24■□□□□ 0.03
HCFC1-204ENST00000461098 CDAN1Q8IWY9 1227 aa15.24■□□□□ 0.03
HCFC1-204ENST00000461098 CNKSR2Q8WXI2 1034 aa15.24■□□□□ 0.03
HCFC1-204ENST00000461098 BRI3BPQ8WY22 251 aa15.24■□□□□ 0.03
HCFC1-204ENST00000461098 OPTNQ96CV9 577 aa15.24■□□□□ 0.03
HCFC1-204ENST00000461098 PTCH2Q9Y6C5 1203 aa15.24■□□□□ 0.03
HCFC1-204ENST00000461098 TRIOBPQ9H2D6 2365 aa15.23■□□□□ 0.03
HCFC1-204ENST00000461098 NEXNQ0ZGT2 675 aa15.23■□□□□ 0.03
HCFC1-204ENST00000461098 GCKRQ14397 625 aa15.23■□□□□ 0.03
HCFC1-204ENST00000461098 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.23■□□□□ 0.03
HCFC1-204ENST00000461098 TEPSINQ96N21 525 aa15.23■□□□□ 0.03
HCFC1-204ENST00000461098 MPHOSPH8Q99549 860 aa15.23■□□□□ 0.03
HCFC1-204ENST00000461098 TMEM106CQ9BVX2 250 aa15.23■□□□□ 0.03
HCFC1-204ENST00000461098 ELP3Q9H9T3 547 aa15.23■□□□□ 0.03
HCFC1-204ENST00000461098 VEZTQ9HBM0 779 aa15.23■□□□□ 0.03
HCFC1-204ENST00000461098 ZSWIM8A7E2V4 1837 aa15.22■□□□□ 0.03
HCFC1-204ENST00000461098 H0YGN5 161 aa15.22■□□□□ 0.03
HCFC1-204ENST00000461098 MYO1BO43795 1136 aa15.22■□□□□ 0.03
HCFC1-204ENST00000461098 HELBQ8NG08 1087 aaPredicted RBP15.22■□□□□ 0.03
HCFC1-204ENST00000461098 LAMA3Q16787 3333 aa15.22■□□□□ 0.03
HCFC1-204ENST00000461098 A0A0C4DFX4 3053 aa15.21■□□□□ 0.03
HCFC1-204ENST00000461098 KCNJ4P48050 445 aa15.21■□□□□ 0.03
HCFC1-204ENST00000461098 CALD1Q05682 793 aaKnown RBP15.21■□□□□ 0.03
HCFC1-204ENST00000461098 SLC9C1Q4G0N8 1177 aa15.21■□□□□ 0.03
HCFC1-204ENST00000461098 FAM43AQ8N2R8 423 aa15.21■□□□□ 0.03
HCFC1-204ENST00000461098 JAG2Q9Y219 1238 aa15.21■□□□□ 0.03
HCFC1-204ENST00000461098 SPDYE2Q495Y8 402 aa15.2■□□□□ 0.02
HCFC1-204ENST00000461098 NBPF11Q86T75 865 aa15.2■□□□□ 0.02
HCFC1-204ENST00000461098 CHMP4AQ9BY43 222 aa15.2■□□□□ 0.02
HCFC1-204ENST00000461098 ARHGAP39Q9C0H5 1083 aa15.2■□□□□ 0.02
HCFC1-204ENST00000461098 ZNF70Q9UC06 446 aaPredicted RBP15.2■□□□□ 0.02
HCFC1-204ENST00000461098 FOXO4P98177 505 aa15.19■□□□□ 0.02
HCFC1-204ENST00000461098 VGLL4Q14135 290 aa15.19■□□□□ 0.02
HCFC1-204ENST00000461098 TAF1CQ15572 869 aaPredicted RBP15.19■□□□□ 0.02
HCFC1-204ENST00000461098 SH3TC2Q8TF17 1288 aa15.19■□□□□ 0.02
HCFC1-204ENST00000461098 TSR2Q969E8 191 aaKnown RBP15.19■□□□□ 0.02
HCFC1-204ENST00000461098 ZFYVE28Q9HCC9 887 aa15.19■□□□□ 0.02
HCFC1-204ENST00000461098 CCL15-CCL14A0A0B4J2E2 113 aa15.18■□□□□ 0.02
HCFC1-204ENST00000461098 ANKRD18BA2A2Z9 1011 aa15.18■□□□□ 0.02
HCFC1-204ENST00000461098 MYCP01106 439 aaPredicted RBP15.18■□□□□ 0.02
HCFC1-204ENST00000461098 SLC4A2P04920 1241 aa15.18■□□□□ 0.02
HCFC1-204ENST00000461098 CCL15Q16663 113 aa15.18■□□□□ 0.02
HCFC1-204ENST00000461098 SLC4A8Q2Y0W8 1093 aa15.18■□□□□ 0.02
HCFC1-204ENST00000461098 ZNF804AQ7Z570 1209 aa15.18■□□□□ 0.02
HCFC1-204ENST00000461098 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.18■□□□□ 0.02
HCFC1-204ENST00000461098 TDRD3Q9H7E2 651 aaKnown RBP15.18■□□□□ 0.02
HCFC1-204ENST00000461098 FAM205AQ6ZU69 1335 aa15.17■□□□□ 0.02
HCFC1-204ENST00000461098 ARAP2Q8WZ64 1704 aa15.17■□□□□ 0.02
HCFC1-204ENST00000461098 GTF2A2P52657 109 aa15.17■□□□□ 0.02
HCFC1-204ENST00000461098 RBM5P52756 815 aaKnown RBP eCLIP15.17■□□□□ 0.021e-6■□□□□ 10
HCFC1-204ENST00000461098 SHISA4Q96DD7 197 aa15.17■□□□□ 0.02
HCFC1-204ENST00000461098 TMEM39BQ9GZU3 492 aa15.17■□□□□ 0.02
HCFC1-204ENST00000461098 SERPINA10Q9UK55 444 aa15.17■□□□□ 0.02
HCFC1-204ENST00000461098 TLR2O60603 784 aa15.16■□□□□ 0.02
HCFC1-204ENST00000461098 CTGFP29279 349 aa15.16■□□□□ 0.02
HCFC1-204ENST00000461098 MAP3K9P80192 1104 aa15.16■□□□□ 0.02
HCFC1-204ENST00000461098 LACTBP83111 547 aaPredicted RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms