RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 RGS19P49795 217 aa18.6■□□□□ 0.57
ATG4B-213ENST00000460211 TBC1D10BQ4KMP7 808 aaPredicted RBP18.6■□□□□ 0.57
ATG4B-213ENST00000460211 CIAO1O76071 339 aa18.59■□□□□ 0.57
ATG4B-213ENST00000460211 USP17L8P0C7I0 530 aa18.59■□□□□ 0.57
ATG4B-213ENST00000460211 MMP14P50281 582 aa18.59■□□□□ 0.57
ATG4B-213ENST00000460211 GTF2IP78347 998 aa18.59■□□□□ 0.57
ATG4B-213ENST00000460211 CAVIN4Q5BKX8 364 aa18.59■□□□□ 0.57
ATG4B-213ENST00000460211 DACT2Q5SW24 774 aa18.59■□□□□ 0.57
ATG4B-213ENST00000460211 RBM26Q5T8P6 1007 aaKnown RBP18.59■□□□□ 0.57
ATG4B-213ENST00000460211 VPS37DQ86XT2 251 aa18.59■□□□□ 0.57
ATG4B-213ENST00000460211 OGFOD1Q8N543 542 aa18.59■□□□□ 0.57
ATG4B-213ENST00000460211 POLR2AP24928 1970 aaKnown RBP18.59■□□□□ 0.57
ATG4B-213ENST00000460211 SRGAP3O43295 1099 aa18.58■□□□□ 0.56
ATG4B-213ENST00000460211 EGFRP00533 1210 aa18.58■□□□□ 0.56
ATG4B-213ENST00000460211 IFIT1P09914 478 aaKnown RBP18.58■□□□□ 0.56
ATG4B-213ENST00000460211 IL1R1P14778 569 aa18.58■□□□□ 0.56
ATG4B-213ENST00000460211 HIBADHP31937 336 aaKnown RBP18.58■□□□□ 0.56
ATG4B-213ENST00000460211 NOGQ13253 232 aa18.58■□□□□ 0.56
ATG4B-213ENST00000460211 PUM3Q15397 648 aaKnown RBP18.58■□□□□ 0.56
ATG4B-213ENST00000460211 SIL1Q9H173 461 aa18.58■□□□□ 0.56
ATG4B-213ENST00000460211 CEP126Q9P2H0 1117 aa18.58■□□□□ 0.56
ATG4B-213ENST00000460211 IRS2Q9Y4H2 1338 aa18.57■□□□□ 0.56
ATG4B-213ENST00000460211 IL15P40933 162 aaPredicted RBP18.57■□□□□ 0.56
ATG4B-213ENST00000460211 ZNF280AP59817 542 aaPredicted RBP18.57■□□□□ 0.56
ATG4B-213ENST00000460211 MTX1Q13505 466 aa18.57■□□□□ 0.56
ATG4B-213ENST00000460211 KIF4BQ2VIQ3 1234 aa18.57■□□□□ 0.56
ATG4B-213ENST00000460211 KRT26Q7Z3Y9 468 aa18.57■□□□□ 0.56
ATG4B-213ENST00000460211 GMLQ99445 158 aa18.57■□□□□ 0.56
ATG4B-213ENST00000460211 COPRSQ9NQ92 184 aa18.57■□□□□ 0.56
ATG4B-213ENST00000460211 HDAC9Q9UKV0 1011 aa18.57■□□□□ 0.56
ATG4B-213ENST00000460211 ZNF609O15014 1411 aa18.57■□□□□ 0.56
ATG4B-213ENST00000460211 ADM5C9JUS6 153 aa18.56■□□□□ 0.56
ATG4B-213ENST00000460211 SLC5A1P13866 664 aa18.56■□□□□ 0.56
ATG4B-213ENST00000460211 VGLL2Q8N8G2 317 aa18.56■□□□□ 0.56
ATG4B-213ENST00000460211 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.56■□□□□ 0.56
ATG4B-213ENST00000460211 FRAT2O75474 233 aaPredicted RBP18.55■□□□□ 0.56
ATG4B-213ENST00000460211 SASH1O94885 1247 aa18.55■□□□□ 0.56
ATG4B-213ENST00000460211 RLBP1P12271 317 aa18.55■□□□□ 0.56
ATG4B-213ENST00000460211 GYG1P46976 350 aa18.55■□□□□ 0.56
ATG4B-213ENST00000460211 ATG9AQ7Z3C6 839 aa18.55■□□□□ 0.56
ATG4B-213ENST00000460211 LPIN2Q92539 896 aa18.55■□□□□ 0.56
ATG4B-213ENST00000460211 DCPSQ96C86 337 aaKnown RBP18.55■□□□□ 0.56
ATG4B-213ENST00000460211 FAM84BQ96KN1 310 aaPredicted RBP18.55■□□□□ 0.56
ATG4B-213ENST00000460211 GBA2Q9HCG7 927 aaPredicted RBP18.55■□□□□ 0.56
ATG4B-213ENST00000460211 MYOZ2Q9NPC6 264 aa18.55■□□□□ 0.56
ATG4B-213ENST00000460211 SCN9AQ15858 1988 aa18.55■□□□□ 0.56
ATG4B-213ENST00000460211 ZBTB7BO15156 539 aaPredicted RBP18.54■□□□□ 0.56
ATG4B-213ENST00000460211 FKBP1AP62942 108 aaKnown RBP18.54■□□□□ 0.56
ATG4B-213ENST00000460211 RGMBQ6NW40 437 aa18.54■□□□□ 0.56
ATG4B-213ENST00000460211 TDRD7Q8NHU6 1098 aaKnown RBP18.54■□□□□ 0.56
ATG4B-213ENST00000460211 MXD3Q9BW11 206 aa18.54■□□□□ 0.56
ATG4B-213ENST00000460211 CHMP4BQ9H444 224 aaKnown RBP18.54■□□□□ 0.56
ATG4B-213ENST00000460211 PA2G4Q9UQ80 394 aaKnown RBP18.54■□□□□ 0.56
ATG4B-213ENST00000460211 FAM155AB1AL88 458 aaPredicted RBP18.53■□□□□ 0.56
ATG4B-213ENST00000460211 FBXO33Q7Z6M2 555 aa18.53■□□□□ 0.56
ATG4B-213ENST00000460211 C2orf69Q8N8R5 385 aa18.53■□□□□ 0.56
ATG4B-213ENST00000460211 PANK1Q8TE04 598 aa18.53■□□□□ 0.56
ATG4B-213ENST00000460211 TNRC18O15417 2968 aaPredicted RBP18.52■□□□□ 0.56
ATG4B-213ENST00000460211 FGFR2P21802 821 aa18.52■□□□□ 0.56
ATG4B-213ENST00000460211 ZNF157P51786 506 aaPredicted RBP18.52■□□□□ 0.56
ATG4B-213ENST00000460211 KIF23Q02241 960 aaPredicted RBP18.52■□□□□ 0.56
ATG4B-213ENST00000460211 G3BP1Q13283 466 aaKnown RBP eCLIP18.52■□□□□ 0.56
ATG4B-213ENST00000460211 ATP2B3Q16720 1220 aa18.52■□□□□ 0.56
ATG4B-213ENST00000460211 KIAA0825Q8IV33 1275 aa18.52■□□□□ 0.56
ATG4B-213ENST00000460211 YTHDC1Q96MU7 727 aaKnown RBP18.52■□□□□ 0.56
ATG4B-213ENST00000460211 FAM205AQ6ZU69 1335 aa18.51■□□□□ 0.55
ATG4B-213ENST00000460211 ATP8B2P98198 1209 aa18.51■□□□□ 0.55
ATG4B-213ENST00000460211 SCARF1Q14162 830 aa18.51■□□□□ 0.55
ATG4B-213ENST00000460211 SULF1Q8IWU6 871 aa18.51■□□□□ 0.55
ATG4B-213ENST00000460211 AKAP2Q9Y2D5 859 aa18.51■□□□□ 0.55
ATG4B-213ENST00000460211 ASTN2O75129 1339 aaPredicted RBP18.5■□□□□ 0.55
ATG4B-213ENST00000460211 TRPA1O75762 1119 aa18.5■□□□□ 0.55
ATG4B-213ENST00000460211 BCAMP50895 628 aa18.5■□□□□ 0.55
ATG4B-213ENST00000460211 MVPQ14764 893 aaKnown RBP18.5■□□□□ 0.55
ATG4B-213ENST00000460211 TBC1D22AQ8WUA7 517 aa18.5■□□□□ 0.55
ATG4B-213ENST00000460211 GNL3LQ9NVN8 582 aaKnown RBP18.5■□□□□ 0.55
ATG4B-213ENST00000460211 GGA3Q9NZ52 723 aa18.5■□□□□ 0.55
ATG4B-213ENST00000460211 DDX19BQ9UMR2 479 aa18.5■□□□□ 0.55
ATG4B-213ENST00000460211 AKAP11Q9UKA4 1901 aa18.49■□□□□ 0.55
ATG4B-213ENST00000460211 PNMA6EA0A0J9YXQ4 647 aa18.49■□□□□ 0.55
ATG4B-213ENST00000460211 MFSD14BQ5SR56 506 aa18.49■□□□□ 0.55
ATG4B-213ENST00000460211 CCDC102AQ96A19 550 aa18.49■□□□□ 0.55
ATG4B-213ENST00000460211 C1orf115Q9H7X2 142 aa18.49■□□□□ 0.55
ATG4B-213ENST00000460211 RNF186Q9NXI6 227 aa18.49■□□□□ 0.55
ATG4B-213ENST00000460211 JAG2Q9Y219 1238 aa18.49■□□□□ 0.55
ATG4B-213ENST00000460211 PSME4Q14997 1843 aa18.49■□□□□ 0.55
ATG4B-213ENST00000460211 A0A1B0GUL6 1792 aa18.48■□□□□ 0.55
ATG4B-213ENST00000460211 F8W031 263 aaPredicted RBP18.48■□□□□ 0.55
ATG4B-213ENST00000460211 SOX10P56693 466 aa18.48■□□□□ 0.55
ATG4B-213ENST00000460211 CHAF1AQ13111 956 aaPredicted RBP18.48■□□□□ 0.55
ATG4B-213ENST00000460211 PDE3AQ14432 1141 aa18.48■□□□□ 0.55
ATG4B-213ENST00000460211 DLGAP5Q15398 846 aa18.48■□□□□ 0.55
ATG4B-213ENST00000460211 ANGEL2Q5VTE6 544 aaKnown RBP18.48■□□□□ 0.55
ATG4B-213ENST00000460211 CERS5Q8N5B7 392 aa18.48■□□□□ 0.55
ATG4B-213ENST00000460211 IQSEC3Q9UPP2 1182 aaPredicted RBP18.48■□□□□ 0.55
ATG4B-213ENST00000460211 COG6Q9Y2V7 657 aa18.48■□□□□ 0.55
ATG4B-213ENST00000460211 OS9Q13438 667 aaPredicted RBP18.47■□□□□ 0.55
ATG4B-213ENST00000460211 POLA2Q14181 598 aa18.47■□□□□ 0.55
ATG4B-213ENST00000460211 SSH3Q8TE77 659 aa18.47■□□□□ 0.55
ATG4B-213ENST00000460211 CDCA5Q96FF9 252 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms