RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 MYH13Q9UKX3 1938 aa13.15□□□□□ -0.3
UBR4-208ENST00000459947 A0A1B0GUL7 405 aa13.15□□□□□ -0.3
UBR4-208ENST00000459947 GTF2IP78347 998 aa13.15□□□□□ -0.3
UBR4-208ENST00000459947 ZNF512BQ96KM6 892 aaPredicted RBP13.15□□□□□ -0.3
UBR4-208ENST00000459947 GMLQ99445 158 aa13.15□□□□□ -0.3
UBR4-208ENST00000459947 SALL1Q9NSC2 1324 aa13.15□□□□□ -0.3
UBR4-208ENST00000459947 MICALL2Q8IY33 904 aa13.14□□□□□ -0.31
UBR4-208ENST00000459947 MRIQ9BWK5 157 aa13.14□□□□□ -0.31
UBR4-208ENST00000459947 TNNI3KQ59H18 835 aa13.14□□□□□ -0.31
UBR4-208ENST00000459947 CRBNQ96SW2 442 aa13.14□□□□□ -0.31
UBR4-208ENST00000459947 FPGT-TNNI3KV9GXZ4 949 aa13.14□□□□□ -0.31
UBR4-208ENST00000459947 GYG1P46976 350 aa13.14□□□□□ -0.31
UBR4-208ENST00000459947 SLC51AQ86UW1 340 aa13.14□□□□□ -0.31
UBR4-208ENST00000459947 PITPNM2Q9BZ72 1349 aa13.14□□□□□ -0.31
UBR4-208ENST00000459947 TXNRD3Q86VQ6 643 aa13.14□□□□□ -0.31
UBR4-208ENST00000459947 MTMR14Q8NCE2 650 aa13.14□□□□□ -0.31
UBR4-208ENST00000459947 SCN9AQ15858 1988 aa13.13□□□□□ -0.31
UBR4-208ENST00000459947 XAGE2Q96GT9 111 aa13.13□□□□□ -0.31
UBR4-208ENST00000459947 NEUROD6Q96NK8 337 aa13.13□□□□□ -0.31
UBR4-208ENST00000459947 COL1A1P02452 1464 aaPredicted RBP13.13□□□□□ -0.31
UBR4-208ENST00000459947 ADAMTSL1Q8N6G6 1762 aa13.13□□□□□ -0.31
UBR4-208ENST00000459947 GCC1Q96CN9 775 aa13.13□□□□□ -0.31
UBR4-208ENST00000459947 GPATCH3Q96I76 525 aa13.13□□□□□ -0.31
UBR4-208ENST00000459947 RWDD1Q9H446 243 aaPredicted RBP13.13□□□□□ -0.31
UBR4-208ENST00000459947 POTECB2RU33 542 aa13.13□□□□□ -0.31
UBR4-208ENST00000459947 KLRK1P26718 216 aa13.13□□□□□ -0.31
UBR4-208ENST00000459947 KIF4BQ2VIQ3 1234 aa13.13□□□□□ -0.31
UBR4-208ENST00000459947 RHPN1Q8TCX5 695 aa13.13□□□□□ -0.31
UBR4-208ENST00000459947 PGAP2Q9UHJ9 254 aa13.13□□□□□ -0.31
UBR4-208ENST00000459947 CLEC11AQ9Y240 323 aa13.13□□□□□ -0.31
UBR4-208ENST00000459947 ZNF646O15015 1829 aaPredicted RBP13.12□□□□□ -0.31
UBR4-208ENST00000459947 MYO1BO43795 1136 aa13.12□□□□□ -0.31
UBR4-208ENST00000459947 TTC39AQ5SRH9 613 aa13.12□□□□□ -0.31
UBR4-208ENST00000459947 MAP4K4O95819 1239 aaPredicted RBP13.12□□□□□ -0.31
UBR4-208ENST00000459947 ARID4AP29374 1257 aaPredicted RBP13.12□□□□□ -0.31
UBR4-208ENST00000459947 HDAC1Q13547 482 aaPredicted RBP13.12□□□□□ -0.31
UBR4-208ENST00000459947 MFSD14BQ5SR56 506 aa13.12□□□□□ -0.31
UBR4-208ENST00000459947 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.12□□□□□ -0.31
UBR4-208ENST00000459947 DCTPP1Q9H773 170 aa13.12□□□□□ -0.31
UBR4-208ENST00000459947 EAPPQ56P03 285 aaPredicted RBP13.12□□□□□ -0.31
UBR4-208ENST00000459947 CCDC102BQ68D86 513 aa13.12□□□□□ -0.31
UBR4-208ENST00000459947 LRRCC1Q9C099 1032 aa13.12□□□□□ -0.31
UBR4-208ENST00000459947 SUPT16HQ9Y5B9 1047 aaKnown RBP13.12□□□□□ -0.31
UBR4-208ENST00000459947 IFIT2P09913 472 aaKnown RBP13.11□□□□□ -0.31
UBR4-208ENST00000459947 SERPINA10Q9UK55 444 aa13.11□□□□□ -0.31
UBR4-208ENST00000459947 EPS15P42566 896 aa13.11□□□□□ -0.31
UBR4-208ENST00000459947 C1QTNF8P60827 252 aa13.11□□□□□ -0.31
UBR4-208ENST00000459947 GSTO1P78417 241 aa13.11□□□□□ -0.31
UBR4-208ENST00000459947 APOBEC3FQ8IUX4 373 aaKnown RBP13.11□□□□□ -0.31
UBR4-208ENST00000459947 BCAMP50895 628 aa13.11□□□□□ -0.31
UBR4-208ENST00000459947 DCPSQ96C86 337 aaKnown RBP13.11□□□□□ -0.31
UBR4-208ENST00000459947 LDHCP07864 332 aa13.1□□□□□ -0.31
UBR4-208ENST00000459947 CHAF1AQ13111 956 aaPredicted RBP13.1□□□□□ -0.31
UBR4-208ENST00000459947 DLGAP5Q15398 846 aa13.1□□□□□ -0.31
UBR4-208ENST00000459947 CERS3Q8IU89 383 aa13.1□□□□□ -0.31
UBR4-208ENST00000459947 MYOZ2Q9NPC6 264 aa13.1□□□□□ -0.31
UBR4-208ENST00000459947 PPP2R3BQ9Y5P8 575 aa13.1□□□□□ -0.31
UBR4-208ENST00000459947 EXOC6BQ9Y2D4 811 aa13.1□□□□□ -0.31
UBR4-208ENST00000459947 CDC37L1Q7L3B6 337 aa13.09□□□□□ -0.31
UBR4-208ENST00000459947 AACSQ86V21 672 aa13.09□□□□□ -0.31
UBR4-208ENST00000459947 TMOD2Q9NZR1 351 aa13.09□□□□□ -0.31
UBR4-208ENST00000459947 SNAP23O00161 211 aa13.09□□□□□ -0.31
UBR4-208ENST00000459947 ZBTB12Q9Y330 459 aaPredicted RBP13.09□□□□□ -0.31
UBR4-208ENST00000459947 LDHBP07195 334 aaKnown RBP13.09□□□□□ -0.31
UBR4-208ENST00000459947 NEFLP07196 543 aa13.09□□□□□ -0.31
UBR4-208ENST00000459947 PHKA1P46020 1223 aa13.09□□□□□ -0.31
UBR4-208ENST00000459947 TNFAIP1Q13829 316 aa13.09□□□□□ -0.31
UBR4-208ENST00000459947 HHIPL2Q6UWX4 724 aa13.09□□□□□ -0.31
UBR4-208ENST00000459947 SIRT2Q8IXJ6 389 aa13.09□□□□□ -0.31
UBR4-208ENST00000459947 TEKT1Q969V4 418 aa13.09□□□□□ -0.31
UBR4-208ENST00000459947 TIMM10P62072 90 aa13.08□□□□□ -0.32
UBR4-208ENST00000459947 TTF1Q15361 905 aaPredicted RBP13.08□□□□□ -0.32
UBR4-208ENST00000459947 APLP1P51693 650 aa13.08□□□□□ -0.32
UBR4-208ENST00000459947 TTF2Q9UNY4 1162 aaKnown RBP13.08□□□□□ -0.32
UBR4-208ENST00000459947 ECM29Q5VYK3 1845 aa13.08□□□□□ -0.32
UBR4-208ENST00000459947 SULF1Q8IWU6 871 aa13.08□□□□□ -0.32
UBR4-208ENST00000459947 ADORA1P30542 326 aa13.07□□□□□ -0.32
UBR4-208ENST00000459947 TNNI2P48788 182 aa13.07□□□□□ -0.32
UBR4-208ENST00000459947 ERICH6Q7L0X2 663 aa13.07□□□□□ -0.32
UBR4-208ENST00000459947 SPATA5Q8NB90 893 aa13.07□□□□□ -0.32
UBR4-208ENST00000459947 HOOK2Q96ED9 719 aa13.07□□□□□ -0.32
UBR4-208ENST00000459947 KCNQ5Q9NR82 932 aa13.07□□□□□ -0.32
UBR4-208ENST00000459947 MAST2Q6P0Q8 1798 aa13.07□□□□□ -0.32
UBR4-208ENST00000459947 KIAA0825Q8IV33 1275 aa13.07□□□□□ -0.32
UBR4-208ENST00000459947 NOL10Q9BSC4 688 aaKnown RBP13.07□□□□□ -0.32
UBR4-208ENST00000459947 WTIPA6NIX2 430 aaPredicted RBP13.07□□□□□ -0.32
UBR4-208ENST00000459947 ZBED3Q96IU2 234 aaPredicted RBP13.07□□□□□ -0.32
UBR4-208ENST00000459947 NF2P35240 595 aa13.06□□□□□ -0.32
UBR4-208ENST00000459947 LRRFIP1Q32MZ4 808 aaKnown RBP13.06□□□□□ -0.32
UBR4-208ENST00000459947 TBC1D10BQ4KMP7 808 aaPredicted RBP13.06□□□□□ -0.32
UBR4-208ENST00000459947 FKBP1CQ5VVH2 108 aa13.06□□□□□ -0.32
UBR4-208ENST00000459947 HSPA6P17066 643 aa13.06□□□□□ -0.32
UBR4-208ENST00000459947 CFAP100Q494V2 611 aa13.06□□□□□ -0.32
UBR4-208ENST00000459947 DZIP1Q86YF9 867 aaKnown RBP13.06□□□□□ -0.32
UBR4-208ENST00000459947 CNTROBQ8N137 903 aa13.06□□□□□ -0.32
UBR4-208ENST00000459947 DBNDD2Q9BQY9 259 aa13.06□□□□□ -0.32
UBR4-208ENST00000459947 RASGRF1Q13972 1273 aa13.06□□□□□ -0.32
UBR4-208ENST00000459947 CERS5Q8N5B7 392 aa13.06□□□□□ -0.32
UBR4-208ENST00000459947 TRPM4Q8TD43 1214 aa13.06□□□□□ -0.32
UBR4-208ENST00000459947 EAF2Q96CJ1 260 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms